| Definition | Exiguobacterium sp. AT1b, complete genome. |
|---|---|
| Accession | NC_012673 |
| Length | 2,999,895 |
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The map label for this gene is ymxG [H]
Identifier: 229918675
GI number: 229918675
Start: 2923111
End: 2924328
Strand: Direct
Name: ymxG [H]
Synonym: EAT1b_2962
Alternate gene names: 229918675
Gene position: 2923111-2924328 (Clockwise)
Preceding gene: 229918674
Following gene: 229918676
Centisome position: 97.44
GC content: 49.01
Gene sequence:
>1218_bases ATGGAATGGATGACATTAGAGAACGGTGTCCGAATCATCATCGAACCAATCGAAGGTTCGCTTAGCACCTCGACCGGGGT ATTCATTAAAGCAGGGACACGTACAGAGACGTTTGAGAACATCGGCATCAGTCATTTGATTGAACATATGTTGTTCAAAG GGACCGCATCGAAAAGCGCGAAAGAGATTGCTTCCTTTTTCGATGAGCTCGGTGGAAGCGTCAACGCCTTCACCTCGAAA GACCATACATGCTTTTACGTGAAGACGCTCGATGAACACGCGGTCATGGCGCTCGACGTCCTGACAGACATGCTGTTTGA GTCGGTGCTCGATGCACAGGAGTTAGAAAAAGAAAAGCGTGTCGTTGTGGAAGAGATTAAAATGTATGAGGATACACCGG AAGATCTCGTTCACGAACTATTGGCCATCGCGGCGTATCGGGACGATATCCTCGCCCAACCGATTTTAGGGACGGAGGAG AGTGTCAATCGATTGACGCGTGACCAGCTCGTCGAATACTTACAAGAACAGTATACGGCCGAGCAGATTGTCGTCTCGAT CGCAGGTCATGTTTCTGAAGAATTGATTGAGGCGGTAAAACGTAGGTTTGCCCACATCCCTTCTAGGGAATCGTCGAAAG AAATCAATCAACCGGAACTGTTCCATGACACATTGACGAAACATAAGGAAACGGAGCAAGCCCACCTCTGTTGGAACTAC GAAGCGATTCCGGCGACGGACGATCGATTGCCTCATTTGGCATTGATGAACAACGCAATCGGCGCGACGATGTCTTCGCG TTTGTTCCAGTCCATCCGTGAAGAAGAGGGCTTGGCTTATTCCATTTACTCCTATTACACGACGTTTTCCGATCACGGTA CGTTTACCATATACGTCGGTACGTCGCCGGATACGTTGGAACAAGTCGAAGTCATCCTAGAGAGAGAGATGAAGCGACTT GTCGCCGACGGTTTGACTGCTGAGGAAGTAGACAAAGGCAAGCGACAATTGAAAGGGTCGATCGCTCTTGGGAATGAAAG TTCGAGTGCCCGTATGAATCGGAACGGACGGAACTTGCTACTTCTCGATGAAGTCGAGCCGATAGAACAAGTGATTGCCA AAGTAGAACGGATTGAACGCGATGAGGTCAATACATTGATTCGTGAGGTGTTGAGCCATCGCCCAGCGAAGTCATATGTC CTCCCAAACGAAGCGTGA
Upstream 100 bases:
>100_bases TCCGCCACGTCGTGACGGGGACCGTCGTCCACCGCGCTCGACAAATTAATTATTCTGGCCATCGTCTTGGTGCGATGGCC TTTTTCATAGGAGTGAGAAT
Downstream 100 bases:
>100_bases CTTGAAACCGAATTGTAAGTTCTCTACACTGATTAAGAGGTATTCTTTAGTTTGGATAGGATACAGGTGAAAGAAGGGAA AGACTTGAACTTAACGGATT
Product: peptidase M16 domain protein
Products: NA
Alternate protein names: ORFP [H]
Number of amino acids: Translated: 405; Mature: 405
Protein sequence:
>405_residues MEWMTLENGVRIIIEPIEGSLSTSTGVFIKAGTRTETFENIGISHLIEHMLFKGTASKSAKEIASFFDELGGSVNAFTSK DHTCFYVKTLDEHAVMALDVLTDMLFESVLDAQELEKEKRVVVEEIKMYEDTPEDLVHELLAIAAYRDDILAQPILGTEE SVNRLTRDQLVEYLQEQYTAEQIVVSIAGHVSEELIEAVKRRFAHIPSRESSKEINQPELFHDTLTKHKETEQAHLCWNY EAIPATDDRLPHLALMNNAIGATMSSRLFQSIREEEGLAYSIYSYYTTFSDHGTFTIYVGTSPDTLEQVEVILEREMKRL VADGLTAEEVDKGKRQLKGSIALGNESSSARMNRNGRNLLLLDEVEPIEQVIAKVERIERDEVNTLIREVLSHRPAKSYV LPNEA
Sequences:
>Translated_405_residues MEWMTLENGVRIIIEPIEGSLSTSTGVFIKAGTRTETFENIGISHLIEHMLFKGTASKSAKEIASFFDELGGSVNAFTSK DHTCFYVKTLDEHAVMALDVLTDMLFESVLDAQELEKEKRVVVEEIKMYEDTPEDLVHELLAIAAYRDDILAQPILGTEE SVNRLTRDQLVEYLQEQYTAEQIVVSIAGHVSEELIEAVKRRFAHIPSRESSKEINQPELFHDTLTKHKETEQAHLCWNY EAIPATDDRLPHLALMNNAIGATMSSRLFQSIREEEGLAYSIYSYYTTFSDHGTFTIYVGTSPDTLEQVEVILEREMKRL VADGLTAEEVDKGKRQLKGSIALGNESSSARMNRNGRNLLLLDEVEPIEQVIAKVERIERDEVNTLIREVLSHRPAKSYV LPNEA >Mature_405_residues MEWMTLENGVRIIIEPIEGSLSTSTGVFIKAGTRTETFENIGISHLIEHMLFKGTASKSAKEIASFFDELGGSVNAFTSK DHTCFYVKTLDEHAVMALDVLTDMLFESVLDAQELEKEKRVVVEEIKMYEDTPEDLVHELLAIAAYRDDILAQPILGTEE SVNRLTRDQLVEYLQEQYTAEQIVVSIAGHVSEELIEAVKRRFAHIPSRESSKEINQPELFHDTLTKHKETEQAHLCWNY EAIPATDDRLPHLALMNNAIGATMSSRLFQSIREEEGLAYSIYSYYTTFSDHGTFTIYVGTSPDTLEQVEVILEREMKRL VADGLTAEEVDKGKRQLKGSIALGNESSSARMNRNGRNLLLLDEVEPIEQVIAKVERIERDEVNTLIREVLSHRPAKSYV LPNEA
Specific function: Unknown
COG id: COG0612
COG function: function code R; Predicted Zn-dependent peptidases
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the peptidase M16 family [H]
Homologues:
Organism=Homo sapiens, GI94538354, Length=413, Percent_Identity=27.3607748184019, Blast_Score=157, Evalue=1e-38, Organism=Homo sapiens, GI46593007, Length=401, Percent_Identity=24.4389027431421, Blast_Score=127, Evalue=2e-29, Organism=Homo sapiens, GI24308013, Length=423, Percent_Identity=21.9858156028369, Blast_Score=99, Evalue=8e-21, Organism=Homo sapiens, GI50592988, Length=411, Percent_Identity=20.6812652068127, Blast_Score=82, Evalue=7e-16, Organism=Escherichia coli, GI1787770, Length=223, Percent_Identity=23.3183856502242, Blast_Score=67, Evalue=2e-12, Organism=Caenorhabditis elegans, GI71999683, Length=403, Percent_Identity=25.0620347394541, Blast_Score=137, Evalue=1e-32, Organism=Caenorhabditis elegans, GI17553678, Length=423, Percent_Identity=23.8770685579196, Blast_Score=133, Evalue=1e-31, Organism=Saccharomyces cerevisiae, GI6323192, Length=421, Percent_Identity=28.7410926365796, Blast_Score=183, Evalue=4e-47, Organism=Saccharomyces cerevisiae, GI6321813, Length=413, Percent_Identity=22.5181598062954, Blast_Score=114, Evalue=3e-26, Organism=Drosophila melanogaster, GI21357875, Length=413, Percent_Identity=27.3607748184019, Blast_Score=154, Evalue=1e-37, Organism=Drosophila melanogaster, GI24646943, Length=413, Percent_Identity=27.3607748184019, Blast_Score=154, Evalue=1e-37, Organism=Drosophila melanogaster, GI19921772, Length=432, Percent_Identity=24.3055555555556, Blast_Score=119, Evalue=4e-27,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR011249 - InterPro: IPR011237 - InterPro: IPR011765 - InterPro: IPR001431 - InterPro: IPR007863 [H]
Pfam domain/function: PF00675 Peptidase_M16; PF05193 Peptidase_M16_C [H]
EC number: 3.4.99.- [C]
Molecular weight: Translated: 45794; Mature: 45794
Theoretical pI: Translated: 4.55; Mature: 4.55
Prosite motif: PS00143 INSULINASE
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 2.5 %Met (Translated Protein) 3.0 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 2.5 %Met (Mature Protein) 3.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MEWMTLENGVRIIIEPIEGSLSTSTGVFIKAGTRTETFENIGISHLIEHMLFKGTASKSA CCCEEECCCCEEEEEECCCCCCCCCCEEEEECCCHHHHHHCCHHHHHHHHHHHCCCCHHH KEIASFFDELGGSVNAFTSKDHTCFYVKTLDEHAVMALDVLTDMLFESVLDAQELEKEKR HHHHHHHHHHCCCEEEECCCCCEEEEEEECCCHHHHHHHHHHHHHHHHHHCHHHHHHHHH VVVEEIKMYEDTPEDLVHELLAIAAYRDDILAQPILGTEESVNRLTRDQLVEYLQEQYTA HHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHH EQIVVSIAGHVSEELIEAVKRRFAHIPSRESSKEINQPELFHDTLTKHKETEQAHLCWNY HHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHCCCCCCEEEECC EAIPATDDRLPHLALMNNAIGATMSSRLFQSIREEEGLAYSIYSYYTTFSDHGTFTIYVG CCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEHHHHHHEECCCCEEEEEEC TSPDTLEQVEVILEREMKRLVADGLTAEEVDKGKRQLKGSIALGNESSSARMNRNGRNLL CCCCHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCEEECCCCCCHHHCCCCCEEE LLDEVEPIEQVIAKVERIERDEVNTLIREVLSHRPAKSYVLPNEA EECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCC >Mature Secondary Structure MEWMTLENGVRIIIEPIEGSLSTSTGVFIKAGTRTETFENIGISHLIEHMLFKGTASKSA CCCEEECCCCEEEEEECCCCCCCCCCEEEEECCCHHHHHHCCHHHHHHHHHHHCCCCHHH KEIASFFDELGGSVNAFTSKDHTCFYVKTLDEHAVMALDVLTDMLFESVLDAQELEKEKR HHHHHHHHHHCCCEEEECCCCCEEEEEEECCCHHHHHHHHHHHHHHHHHHCHHHHHHHHH VVVEEIKMYEDTPEDLVHELLAIAAYRDDILAQPILGTEESVNRLTRDQLVEYLQEQYTA HHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHH EQIVVSIAGHVSEELIEAVKRRFAHIPSRESSKEINQPELFHDTLTKHKETEQAHLCWNY HHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHCCCCCCEEEECC EAIPATDDRLPHLALMNNAIGATMSSRLFQSIREEEGLAYSIYSYYTTFSDHGTFTIYVG CCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEHHHHHHEECCCCEEEEEEC TSPDTLEQVEVILEREMKRLVADGLTAEEVDKGKRQLKGSIALGNESSSARMNRNGRNLL CCCCHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCEEECCCCCCHHHCCCCCEEE LLDEVEPIEQVIAKVERIERDEVNTLIREVLSHRPAKSYVLPNEA EECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: Zn [C]
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: Hydrolase; Acting on peptide bonds (Peptidases); Endopeptidases of unknown catalytic mechanism [C]
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 9384377; 8098035 [H]