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The map label for this gene is rimP

Identifier: 229918665

GI number: 229918665

Start: 2913611

End: 2914081

Strand: Direct

Name: rimP

Synonym: EAT1b_2952

Alternate gene names: 229918665

Gene position: 2913611-2914081 (Clockwise)

Preceding gene: 229918664

Following gene: 229918666

Centisome position: 97.12

GC content: 46.92

Gene sequence:

>471_bases
GTGTCCAAAATAACAGAAGTCGTTGAATCGATTGCGTTGCCGATCGTAGAACGGGAAAACATGGAATTGGTCGATGTGGA
ATTCGTTAAGGAAGGTCCAGACTGGTTTTTGCGCGTCTATATCGATAAGCCGGGGGGCGTCGATTTGGACGATTGCGTCA
ATATCAATGAACAGCTCTCGGAAAAACTAAACGAAACCGATCCGATTGAACAGGCTTATTATCTTGATGTCTCGAGTCCT
GGTGCGGAGCGTCCGCTGAAAAAGCCGAGCGATTTTGAACGTGCGGTAGGCAAAAATGTCTACATGAAAACGTTCGCTCC
GATCGATGGTGCCAAAGAGTTTGAAGGAATTTTGACGGCATATGATGGGGAAACGGTCGTGATCGAGACACGCATCAAGA
CAAGAAAAAAAGCGGTATCGCTACCGGTAGACAAAATTGCACAAGCCCGCTTAGCGGTCACGTTTAGTTAA

Upstream 100 bases:

>100_bases
ATATGATATATTGGTATCGAACAAAGTTGGATACTACGACGGAAAGGAGTAGGGAACCCTACTCCTTTCTTGTATGTAAA
AGCCAGAAGGAGGGATGAGA

Downstream 100 bases:

>100_bases
GGAGAGGGAAGAAGATGGGTCCACAATTACTCACTACAATCGATCAGATTGCCAAAGAAAAAGGAATCGACAAAAATATC
ATTATCGATGCACTCGAACA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 156; Mature: 155

Protein sequence:

>156_residues
MSKITEVVESIALPIVERENMELVDVEFVKEGPDWFLRVYIDKPGGVDLDDCVNINEQLSEKLNETDPIEQAYYLDVSSP
GAERPLKKPSDFERAVGKNVYMKTFAPIDGAKEFEGILTAYDGETVVIETRIKTRKKAVSLPVDKIAQARLAVTFS

Sequences:

>Translated_156_residues
MSKITEVVESIALPIVERENMELVDVEFVKEGPDWFLRVYIDKPGGVDLDDCVNINEQLSEKLNETDPIEQAYYLDVSSP
GAERPLKKPSDFERAVGKNVYMKTFAPIDGAKEFEGILTAYDGETVVIETRIKTRKKAVSLPVDKIAQARLAVTFS
>Mature_155_residues
SKITEVVESIALPIVERENMELVDVEFVKEGPDWFLRVYIDKPGGVDLDDCVNINEQLSEKLNETDPIEQAYYLDVSSPG
AERPLKKPSDFERAVGKNVYMKTFAPIDGAKEFEGILTAYDGETVVIETRIKTRKKAVSLPVDKIAQARLAVTFS

Specific function: Required for maturation of 30S ribosomal subunits

COG id: COG0779

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasm (Potential)

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the rimP family

Homologues:

Organism=Escherichia coli, GI226510978, Length=135, Percent_Identity=36.2962962962963, Blast_Score=89, Evalue=1e-19,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): RIMP_EXISA (C4L660)

Other databases:

- EMBL:   CP001615
- RefSeq:   YP_002887311.1
- GeneID:   7871095
- GenomeReviews:   CP001615_GR
- KEGG:   eat:EAT1b_2952
- OMA:   TIENCAA
- ProtClustDB:   PRK00092
- GO:   GO:0005737
- HAMAP:   MF_01077
- InterPro:   IPR003728

Pfam domain/function: PF02576 DUF150

EC number: NA

Molecular weight: Translated: 17483; Mature: 17352

Theoretical pI: Translated: 4.38; Mature: 4.38

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
2.6 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
1.3 %Met     (Mature Protein)
1.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSKITEVVESIALPIVERENMELVDVEFVKEGPDWFLRVYIDKPGGVDLDDCVNINEQLS
CCHHHHHHHHHHCCCCCCCCCEEEEEEEECCCCCEEEEEEEECCCCCCHHHHCCCHHHHH
EKLNETDPIEQAYYLDVSSPGAERPLKKPSDFERAVGKNVYMKTFAPIDGAKEFEGILTA
HHCCCCCCCCEEEEEECCCCCCCCCCCCCCHHHHHHCCCEEEEEECCCCCCHHHCCEEEE
YDGETVVIETRIKTRKKAVSLPVDKIAQARLAVTFS
ECCCEEEEEECCHHHHHHHCCCHHHHHHEEEEEEEC
>Mature Secondary Structure 
SKITEVVESIALPIVERENMELVDVEFVKEGPDWFLRVYIDKPGGVDLDDCVNINEQLS
CHHHHHHHHHHCCCCCCCCCEEEEEEEECCCCCEEEEEEEECCCCCCHHHHCCCHHHHH
EKLNETDPIEQAYYLDVSSPGAERPLKKPSDFERAVGKNVYMKTFAPIDGAKEFEGILTA
HHCCCCCCCCEEEEEECCCCCCCCCCCCCCHHHHHHCCCEEEEEECCCCCCHHHCCEEEE
YDGETVVIETRIKTRKKAVSLPVDKIAQARLAVTFS
ECCCEEEEEECCHHHHHHHCCCHHHHHHEEEEEEEC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA