Definition Exiguobacterium sp. AT1b, complete genome.
Accession NC_012673
Length 2,999,895

Click here to switch to the map view.

The map label for this gene is 229918629

Identifier: 229918629

GI number: 229918629

Start: 2879503

End: 2880228

Strand: Direct

Name: 229918629

Synonym: EAT1b_2916

Alternate gene names: NA

Gene position: 2879503-2880228 (Clockwise)

Preceding gene: 229918628

Following gene: 229918630

Centisome position: 95.99

GC content: 46.56

Gene sequence:

>726_bases
ATGACATCGTTGTCTAATGTAATTAAACGCCAACGTGCAACATCGAATACCCCGCAACGAATCGAATCGAAGCGATTAGA
GACACCCGTAATAGAACCGAATGACGGAATCAATCATGGGGATGCCATCCAATCACGCTATGAGAAGTTGAAGCAGGACG
AAGAAGCGTTTCAACAGTTTCAACAGACTGAAGTCGAACAGTTGGAGCGGTTGAAGCAACAAGTGTTTGAAGAAGCGCGT
TCAGAAGGATACCAAGAAGGACTCCTTCAAGGTAGGCAGGATGGATTGGCTGAATTTGAAGAGATCACGACACGTTTGAA
TTCCGTTTCGACCGAACTCGAACTCTTATTCGAAGAAAAGTGGAGGCGAGCGGAAGAACAACTCATTGAATTGGCCGTTA
CAGTCAGTGCACACGTGACGACAGATCTTGTCCGAAAAGATGAAGAGCTATTTGCGACCATGATTCGTGATCAGATGTCA
CATATGATCGATGCCGAAGCACTTACAATCTTTGTTCATCCGACACGTCTTGCCTCCATTCAGCGATTCGAATCGATGTG
GCGGACAGAAGAGACACCTCCTCTGAAATATCGAGGGGACGGATCATTGGATGAGACAGCAGTTCGAATCGAGTCGCCAC
ATCGTGGCAATGAAGTCGATTTGACATATAGTTTCGAACGGATCCAAGCCAAAATCGAGGAGGTTCTAGCGGATGGCGCT
TATTGA

Upstream 100 bases:

>100_bases
GTACGGTTGCGTGACGTCGAAGAGGCACAGAGCCGAATCGTCGGAATCATTCGTCGCCTAGAGGACGTCGGTGAGATTGT
AATCAGTCGAGGTGGAGGAG

Downstream 100 bases:

>100_bases
GCAGGTTCTCGGCTCAATCAAACAGTCTACAGACGGCGAGTTCACGCGAAAAATCGGTCGAGTTTGTCGAGTCATCGGCT
TGATGATTGAGTCGAACGGA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 241; Mature: 240

Protein sequence:

>241_residues
MTSLSNVIKRQRATSNTPQRIESKRLETPVIEPNDGINHGDAIQSRYEKLKQDEEAFQQFQQTEVEQLERLKQQVFEEAR
SEGYQEGLLQGRQDGLAEFEEITTRLNSVSTELELLFEEKWRRAEEQLIELAVTVSAHVTTDLVRKDEELFATMIRDQMS
HMIDAEALTIFVHPTRLASIQRFESMWRTEETPPLKYRGDGSLDETAVRIESPHRGNEVDLTYSFERIQAKIEEVLADGA
Y

Sequences:

>Translated_241_residues
MTSLSNVIKRQRATSNTPQRIESKRLETPVIEPNDGINHGDAIQSRYEKLKQDEEAFQQFQQTEVEQLERLKQQVFEEAR
SEGYQEGLLQGRQDGLAEFEEITTRLNSVSTELELLFEEKWRRAEEQLIELAVTVSAHVTTDLVRKDEELFATMIRDQMS
HMIDAEALTIFVHPTRLASIQRFESMWRTEETPPLKYRGDGSLDETAVRIESPHRGNEVDLTYSFERIQAKIEEVLADGA
Y
>Mature_240_residues
TSLSNVIKRQRATSNTPQRIESKRLETPVIEPNDGINHGDAIQSRYEKLKQDEEAFQQFQQTEVEQLERLKQQVFEEARS
EGYQEGLLQGRQDGLAEFEEITTRLNSVSTELELLFEEKWRRAEEQLIELAVTVSAHVTTDLVRKDEELFATMIRDQMSH
MIDAEALTIFVHPTRLASIQRFESMWRTEETPPLKYRGDGSLDETAVRIESPHRGNEVDLTYSFERIQAKIEEVLADGAY

Specific function: Unknown

COG id: COG1317

COG function: function code NU; Flagellar biosynthesis/type III secretory pathway protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 27917; Mature: 27786

Theoretical pI: Translated: 4.47; Mature: 4.47

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
2.1 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.7 %Met     (Mature Protein)
1.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTSLSNVIKRQRATSNTPQRIESKRLETPVIEPNDGINHGDAIQSRYEKLKQDEEAFQQF
CCHHHHHHHHHHHCCCCHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHH
QQTEVEQLERLKQQVFEEARSEGYQEGLLQGRQDGLAEFEEITTRLNSVSTELELLFEEK
HHHHHHHHHHHHHHHHHHHHHCCHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
WRRAEEQLIELAVTVSAHVTTDLVRKDEELFATMIRDQMSHMIDAEALTIFVHPTRLASI
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEECHHHHHHH
QRFESMWRTEETPPLKYRGDGSLDETAVRIESPHRGNEVDLTYSFERIQAKIEEVLADGA
HHHHHHHCCCCCCCCEECCCCCCCHHHEEECCCCCCCEEEEEHHHHHHHHHHHHHHHCCC
Y
C
>Mature Secondary Structure 
TSLSNVIKRQRATSNTPQRIESKRLETPVIEPNDGINHGDAIQSRYEKLKQDEEAFQQF
CHHHHHHHHHHHCCCCHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHH
QQTEVEQLERLKQQVFEEARSEGYQEGLLQGRQDGLAEFEEITTRLNSVSTELELLFEEK
HHHHHHHHHHHHHHHHHHHHHCCHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
WRRAEEQLIELAVTVSAHVTTDLVRKDEELFATMIRDQMSHMIDAEALTIFVHPTRLASI
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEECHHHHHHH
QRFESMWRTEETPPLKYRGDGSLDETAVRIESPHRGNEVDLTYSFERIQAKIEEVLADGA
HHHHHHHCCCCCCCCEECCCCCCCHHHEEECCCCCCCEEEEEHHHHHHHHHHHHHHHCCC
Y
C

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA