| Definition | Exiguobacterium sp. AT1b, complete genome. |
|---|---|
| Accession | NC_012673 |
| Length | 2,999,895 |
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The map label for this gene is 229918543
Identifier: 229918543
GI number: 229918543
Start: 2791671
End: 2793227
Strand: Direct
Name: 229918543
Synonym: EAT1b_2830
Alternate gene names: NA
Gene position: 2791671-2793227 (Clockwise)
Preceding gene: 229918542
Following gene: 229918544
Centisome position: 93.06
GC content: 51.06
Gene sequence:
>1557_bases GTGAAGGTAGAAGCATTTGATGCGCTATATGCATCCACATCACCGATGATTCAAATCGATCATGGATATGGTCGCTGGCT CGATTATCGAGGGATGGATGAAATCGAGAAACGTGCCGAGGAGGTCTCAGGGCGCACCTATGAGCATCTGCCGGAGCTCG TCGAAATAATCAAGGGGCAACAAGAACAGTTCGGGGAACTTTCGGAAGAGTTGGAAGCAAACCTGGAGTTACTCGCTCAG CGAAAAGCGTACGTGATGGTGACGGGGCAACAGGTCGGCGTATACGGAGGACCTTTGTTTGCCGTATACAAACTATTAGC GGTCATCAAACGGGCGAAGCAGGCCGAAGCGAAATTAGGGAAACCGGTCCTTCCTGTTTTCTGGATGGCGACGGAAGATC ATGACTTTGCTGAAATCAACCATGTCTTCACGACACAGGCGTTTTCGAGGACGTTGAAAAAAGATGCCTTGTCATCGTTA CCGCTTGCAGGAAAAGCATCGGTAGGGGACTTAGAGTTCGAACGGGTAAAGCTCGAACTTGTTCAAATGGCGCAACGTCT GCTATTGAATGAAACAGAGACACCGTATACCTCGCATTTGTATCATGAGCTGATTGACCTCATTCAAGCGAGTCGTTCGT TCGCTCACTTTTTCGGTGGCATGATGCGGCGATTCGTCGGGTCTGACTTTTTGTTGTTTGACCCACACGCGAAAGACGTA CGGGCTCTCGAACGCCCCATGTTCCGACGTCTCATCGAGCATCATGAAGCGCTTCATGAAGCGCTCGGTCATGCGTATGA AGAAGGGATGCCGTCGGTCGAATTGAACAAGGATGCGGCCCATCTGTTTTATCACGATGGAACGCGAGAGCTGCTCACAA AGGTCGATGGCGTGTTCACGACAAAGAGAGGGCATCGCTTCACTGAAGGCGAACTGCTCACAGAGATAGAGGCGCACCCG GAGCGTTTCTCAAATAACGTGGTCTCCCGTCCGCTCATGCAGGATTTCCTGTTCCCGACTCTTGGATACGTGGCAGGTCC CGGTGAAATTGCCTATTGGCTCCAGCTTCGACCGCTCTTCCACGAGATGGGATGGATGATGCCGCTTCTCTTGCCACGTC TTGGTGCGTTGATCGTGTCAAGAAATGATGAGAAGAAGCTTCGTCAAGAAAGCGTGACATTGGAGGAGTATATGAAGCAA CCGCTCCCGGACCATGCATTTGACGATGAAGCGTTTGAAGAAAAGCTATATGCGTACCGAGCGCTTACGGAGGCCGTCAG TCATGAGGCAGGGAAACAAGGAAGACGATTTGAGGCGAAGTCGAGACATGTGCTCGAGCGATTGGCGGATGAGATGCGTG CCGAATCGAAGCGAGAACAATATCGCTTGAATGCGCGACGGATTCATCTATCGACCCGACTGTTTCCGATGGATGCCCCA CAAGAGCGCATCCTCTCGATGGTTCCGATGCTAAATCGTCACGGACTAGACGTGTTTCAACGATTGAAACAGGCATATGA ACAATCCGATGCGGAGCGATGTTTGTTCTATGTATAA
Upstream 100 bases:
>100_bases GTTACTCTTCTTGCTACTTGTCCCGACCCACGCCATTTTATTCGCGATCGGTGTAGCCCAAGGCATGATTCGTTGATTGA TTGAAAGGAAGTTGTTATAC
Downstream 100 bases:
>100_bases TCTTTTTTGGAGAGCTCTTGACATTTGTCAGGAGCTTTTTTTCGTTGTTACCTTTTTGTTTCCTCTTTTCACTAAAAACC TGTACGGACCTTGACATTTT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 518; Mature: 518
Protein sequence:
>518_residues MKVEAFDALYASTSPMIQIDHGYGRWLDYRGMDEIEKRAEEVSGRTYEHLPELVEIIKGQQEQFGELSEELEANLELLAQ RKAYVMVTGQQVGVYGGPLFAVYKLLAVIKRAKQAEAKLGKPVLPVFWMATEDHDFAEINHVFTTQAFSRTLKKDALSSL PLAGKASVGDLEFERVKLELVQMAQRLLLNETETPYTSHLYHELIDLIQASRSFAHFFGGMMRRFVGSDFLLFDPHAKDV RALERPMFRRLIEHHEALHEALGHAYEEGMPSVELNKDAAHLFYHDGTRELLTKVDGVFTTKRGHRFTEGELLTEIEAHP ERFSNNVVSRPLMQDFLFPTLGYVAGPGEIAYWLQLRPLFHEMGWMMPLLLPRLGALIVSRNDEKKLRQESVTLEEYMKQ PLPDHAFDDEAFEEKLYAYRALTEAVSHEAGKQGRRFEAKSRHVLERLADEMRAESKREQYRLNARRIHLSTRLFPMDAP QERILSMVPMLNRHGLDVFQRLKQAYEQSDAERCLFYV
Sequences:
>Translated_518_residues MKVEAFDALYASTSPMIQIDHGYGRWLDYRGMDEIEKRAEEVSGRTYEHLPELVEIIKGQQEQFGELSEELEANLELLAQ RKAYVMVTGQQVGVYGGPLFAVYKLLAVIKRAKQAEAKLGKPVLPVFWMATEDHDFAEINHVFTTQAFSRTLKKDALSSL PLAGKASVGDLEFERVKLELVQMAQRLLLNETETPYTSHLYHELIDLIQASRSFAHFFGGMMRRFVGSDFLLFDPHAKDV RALERPMFRRLIEHHEALHEALGHAYEEGMPSVELNKDAAHLFYHDGTRELLTKVDGVFTTKRGHRFTEGELLTEIEAHP ERFSNNVVSRPLMQDFLFPTLGYVAGPGEIAYWLQLRPLFHEMGWMMPLLLPRLGALIVSRNDEKKLRQESVTLEEYMKQ PLPDHAFDDEAFEEKLYAYRALTEAVSHEAGKQGRRFEAKSRHVLERLADEMRAESKREQYRLNARRIHLSTRLFPMDAP QERILSMVPMLNRHGLDVFQRLKQAYEQSDAERCLFYV >Mature_518_residues MKVEAFDALYASTSPMIQIDHGYGRWLDYRGMDEIEKRAEEVSGRTYEHLPELVEIIKGQQEQFGELSEELEANLELLAQ RKAYVMVTGQQVGVYGGPLFAVYKLLAVIKRAKQAEAKLGKPVLPVFWMATEDHDFAEINHVFTTQAFSRTLKKDALSSL PLAGKASVGDLEFERVKLELVQMAQRLLLNETETPYTSHLYHELIDLIQASRSFAHFFGGMMRRFVGSDFLLFDPHAKDV RALERPMFRRLIEHHEALHEALGHAYEEGMPSVELNKDAAHLFYHDGTRELLTKVDGVFTTKRGHRFTEGELLTEIEAHP ERFSNNVVSRPLMQDFLFPTLGYVAGPGEIAYWLQLRPLFHEMGWMMPLLLPRLGALIVSRNDEKKLRQESVTLEEYMKQ PLPDHAFDDEAFEEKLYAYRALTEAVSHEAGKQGRRFEAKSRHVLERLADEMRAESKREQYRLNARRIHLSTRLFPMDAP QERILSMVPMLNRHGLDVFQRLKQAYEQSDAERCLFYV
Specific function: Unknown
COG id: COG4365
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the UPF0747 family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR011199 [H]
Pfam domain/function: PF10079 DUF2317 [H]
EC number: NA
Molecular weight: Translated: 59857; Mature: 59857
Theoretical pI: Translated: 6.29; Mature: 6.29
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.2 %Cys (Translated Protein) 3.7 %Met (Translated Protein) 3.9 %Cys+Met (Translated Protein) 0.2 %Cys (Mature Protein) 3.7 %Met (Mature Protein) 3.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKVEAFDALYASTSPMIQIDHGYGRWLDYRGMDEIEKRAEEVSGRTYEHLPELVEIIKGQ CCCCHHHHHHHCCCCCEEEECCCCCCCCCCCHHHHHHHHHHHCCCCHHHHHHHHHHHCCC QEQFGELSEELEANLELLAQRKAYVMVTGQQVGVYGGPLFAVYKLLAVIKRAKQAEAKLG HHHHHHHHHHHHHHHHHHHCCCEEEEEECCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHC KPVLPVFWMATEDHDFAEINHVFTTQAFSRTLKKDALSSLPLAGKASVGDLEFERVKLEL CCCCCEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHH VQMAQRLLLNETETPYTSHLYHELIDLIQASRSFAHFFGGMMRRFVGSDFLLFDPHAKDV HHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEECCCHHHH RALERPMFRRLIEHHEALHEALGHAYEEGMPSVELNKDAAHLFYHDGTRELLTKVDGVFT HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEECCCHHHHEEECCHHHHHHHHHCCEE TKRGHRFTEGELLTEIEAHPERFSNNVVSRPLMQDFLFPTLGYVAGPGEIAYWLQLRPLF CCCCCCCCCCHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHCCCCCCEEHHHHHHHHH HEMGWMMPLLLPRLGALIVSRNDEKKLRQESVTLEEYMKQPLPDHAFDDEAFEEKLYAYR HHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHCCHHHHHCCCCCCCCCCHHHHHHHHHHHH ALTEAVSHEAGKQGRRFEAKSRHVLERLADEMRAESKREQYRLNARRIHLSTRLFPMDAP HHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEECCCCC QERILSMVPMLNRHGLDVFQRLKQAYEQSDAERCLFYV HHHHHHHHHHHCCCCHHHHHHHHHHHHHCCHHHHEECC >Mature Secondary Structure MKVEAFDALYASTSPMIQIDHGYGRWLDYRGMDEIEKRAEEVSGRTYEHLPELVEIIKGQ CCCCHHHHHHHCCCCCEEEECCCCCCCCCCCHHHHHHHHHHHCCCCHHHHHHHHHHHCCC QEQFGELSEELEANLELLAQRKAYVMVTGQQVGVYGGPLFAVYKLLAVIKRAKQAEAKLG HHHHHHHHHHHHHHHHHHHCCCEEEEEECCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHC KPVLPVFWMATEDHDFAEINHVFTTQAFSRTLKKDALSSLPLAGKASVGDLEFERVKLEL CCCCCEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHH VQMAQRLLLNETETPYTSHLYHELIDLIQASRSFAHFFGGMMRRFVGSDFLLFDPHAKDV HHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEECCCHHHH RALERPMFRRLIEHHEALHEALGHAYEEGMPSVELNKDAAHLFYHDGTRELLTKVDGVFT HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEECCCHHHHEEECCHHHHHHHHHCCEE TKRGHRFTEGELLTEIEAHPERFSNNVVSRPLMQDFLFPTLGYVAGPGEIAYWLQLRPLF CCCCCCCCCCHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHCCCCCCEEHHHHHHHHH HEMGWMMPLLLPRLGALIVSRNDEKKLRQESVTLEEYMKQPLPDHAFDDEAFEEKLYAYR HHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHCCHHHHHCCCCCCCCCCHHHHHHHHHHHH ALTEAVSHEAGKQGRRFEAKSRHVLERLADEMRAESKREQYRLNARRIHLSTRLFPMDAP HHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEECCCCC QERILSMVPMLNRHGLDVFQRLKQAYEQSDAERCLFYV HHHHHHHHHHHCCCCHHHHHHHHHHHHHCCHHHHEECC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA