Definition Exiguobacterium sp. AT1b, complete genome.
Accession NC_012673
Length 2,999,895

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The map label for this gene is ylbN [H]

Identifier: 229918539

GI number: 229918539

Start: 2789611

End: 2790138

Strand: Direct

Name: ylbN [H]

Synonym: EAT1b_2826

Alternate gene names: 229918539

Gene position: 2789611-2790138 (Clockwise)

Preceding gene: 229918537

Following gene: 229918540

Centisome position: 92.99

GC content: 46.59

Gene sequence:

>528_bases
ATGAAATGGTCTATTGCACAGCTACTTAAGCTCCGAAACCAGGGTGACGGTTTTACAATCGATGAGATGGTAGAACTACC
AGAGCTGACTCAGCTCCATCCGGATATCCGTTCGATTCGCCCGGTGCATGTGCACGGGGATGCATCGTTCACATCTAATC
AAGTTACATTCAATCTGAAGATTCAAGGTGACCTGACGTTGCCAGATGCGCGAACGTTAGAAGATGTCACTTATGAATTC
GATATTGAATCGCTCGAGCCTTTCTTTTTGGAGAATGGGCGTTATACGGAGCAATTCGATGACGTGAATTTGCCAGAAGG
AAATACGATCAGTCTTGTACCGATTGTAAAAGAGCTCATCATGTTAGACGTCCCGATGCAAGTTTACGGGAACGAAACAG
ACAAAACTCAGGTTGAAGGAGAAGGCTGGACGCTTACTGACGAACAGCCCGAAGCCCAACCAAAAATTGACCCGCGTTTC
GCGGGACTAGCCGACCTGTTTTCGAAAAAAGAGAACGAGGAAGGTTAA

Upstream 100 bases:

>100_bases
GCAAAGCGCCGTCGTCAACTGATTTTAGTGTAAAGAAAAAACATTGACAAAACAAGTTGGCCTATCTATAATTCATATTG
TTGCAATTGAGGTGATTCGG

Downstream 100 bases:

>100_bases
CTTATCAAGGAGGTGGACAACGATGGCAGTACCATTCCGTAGAACGTCGAAAACTCGCAAACGTCTTCGTCGTACTCACT
TCAAACTCAACGTACCTGGT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 175; Mature: 175

Protein sequence:

>175_residues
MKWSIAQLLKLRNQGDGFTIDEMVELPELTQLHPDIRSIRPVHVHGDASFTSNQVTFNLKIQGDLTLPDARTLEDVTYEF
DIESLEPFFLENGRYTEQFDDVNLPEGNTISLVPIVKELIMLDVPMQVYGNETDKTQVEGEGWTLTDEQPEAQPKIDPRF
AGLADLFSKKENEEG

Sequences:

>Translated_175_residues
MKWSIAQLLKLRNQGDGFTIDEMVELPELTQLHPDIRSIRPVHVHGDASFTSNQVTFNLKIQGDLTLPDARTLEDVTYEF
DIESLEPFFLENGRYTEQFDDVNLPEGNTISLVPIVKELIMLDVPMQVYGNETDKTQVEGEGWTLTDEQPEAQPKIDPRF
AGLADLFSKKENEEG
>Mature_175_residues
MKWSIAQLLKLRNQGDGFTIDEMVELPELTQLHPDIRSIRPVHVHGDASFTSNQVTFNLKIQGDLTLPDARTLEDVTYEF
DIESLEPFFLENGRYTEQFDDVNLPEGNTISLVPIVKELIMLDVPMQVYGNETDKTQVEGEGWTLTDEQPEAQPKIDPRF
AGLADLFSKKENEEG

Specific function: Unknown

COG id: COG1399

COG function: function code R; Predicted metal-binding, possibly nucleic acid-binding protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003772 [H]

Pfam domain/function: PF02620 DUF177 [H]

EC number: NA

Molecular weight: Translated: 19895; Mature: 19895

Theoretical pI: Translated: 4.03; Mature: 4.03

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
2.3 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.3 %Met     (Mature Protein)
2.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKWSIAQLLKLRNQGDGFTIDEMVELPELTQLHPDIRSIRPVHVHGDASFTSNQVTFNLK
CCCHHHHHHHHHCCCCCCCHHHHHCCCHHHHCCCHHHHCCEEEEECCCCCCCCEEEEEEE
IQGDLTLPDARTLEDVTYEFDIESLEPFFLENGRYTEQFDDVNLPEGNTISLVPIVKELI
EECCEECCCCCCHHHEEEEECCCCCCCEEECCCCCCCCCCCCCCCCCCEEEHHHHHHHHH
MLDVPMQVYGNETDKTQVEGEGWTLTDEQPEAQPKIDPRFAGLADLFSKKENEEG
HHCCCHHHHCCCCCCEEECCCCEEECCCCCCCCCCCCCCHHHHHHHHHCCCCCCC
>Mature Secondary Structure
MKWSIAQLLKLRNQGDGFTIDEMVELPELTQLHPDIRSIRPVHVHGDASFTSNQVTFNLK
CCCHHHHHHHHHCCCCCCCHHHHHCCCHHHHCCCHHHHCCEEEEECCCCCCCCEEEEEEE
IQGDLTLPDARTLEDVTYEFDIESLEPFFLENGRYTEQFDDVNLPEGNTISLVPIVKELI
EECCEECCCCCCHHHEEEEECCCCCCCEEECCCCCCCCCCCCCCCCCCEEEHHHHHHHHH
MLDVPMQVYGNETDKTQVEGEGWTLTDEQPEAQPKIDPRFAGLADLFSKKENEEG
HHCCCHHHHCCCCCCEEECCCCEEECCCCCCCCCCCCCCHHHHHHHHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]