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The map label for this gene is ythA [H]

Identifier: 229918490

GI number: 229918490

Start: 2742370

End: 2743758

Strand: Direct

Name: ythA [H]

Synonym: EAT1b_2777

Alternate gene names: 229918490

Gene position: 2742370-2743758 (Clockwise)

Preceding gene: 229918489

Following gene: 229918491

Centisome position: 91.42

GC content: 49.17

Gene sequence:

>1389_bases
ATGTTTCAAGATCCTGTCCTGATGAGTCGAGCATTGACGGCACTCACATTAGGTTTTCATGTGATTTTTGCCACACTCGG
CGTCGGGGTTCCACTTTTAATTTTATTGGCAGAATTTTTAGGAATTCGTAAAAAAGACCCGAAATACACGCTCATGGCTC
GACGCTGGTCGCGCGGCTATGTCGTGACGGTAGCGGTTGGGGTTGTGACGGGTACGGCCATCGGTCTGCAACTTTCACTC
CTATGGCCGAACTTGATGCGCGTTGCGGGTCAAACGATTGCGCTCCCGCTTTTCATGGAAACGTTCGCCTTCTTCTTTGA
AGCGATTTTCCTTGGTATTTACTTGTACACGTGGGATCGATTTAAAAATCCGTGGCACCACATGCTTCTCGGGATTCCGG
TTGCCGTCGGTGCATTGTTTTCAGGGTTTTTTATCACAACGGTAAACAGTTTTATGAACCAGCCTGTAGGGTTTGATATT
GTCGATGGTCGATTGGCAAATGTCAGCCCGCTCGAAGCGATGTTCAGTCCGGCCATGCCGACGAAAATGGCACACGTGTT
GACTTCGGCTATTTTAACATCCGCGTTCATTCTAGCTGCGATCGCAGCCGTTCAGTTGTTACGTCAACGCCGAAATCAAC
TCGACAAGATGTCAATCGAGTATCATAAGAAAGGTCTTCGTCTGACGATGACGGTCGCTTTGATCTTTGCGATCGCGACA
GCGCTCGTCGGTGACTTCTCAGGTAAATATTTGGCTAAGTATCAACCAGATAAATTAGCAGCTGCAGAATGGCATTTCGA
AACCTCCTCCGAGGCCGAATTGATTTTGGGCGGATGGTTAGAAGATGATGGGCAAGGTGGCTATGAAGTTCGAGGCGCCT
TGAAGATTCCTTACGCCCTCTCTATTCTTGCAGGTGGTGTCCCGAACTATGAAGTGACGGGTCTCAATGAATTTGCGAAA
GAAGATCAACCGCCGCTCTTCGTTCACTATCTATTTGATGCGATGGTCGGAATTGGGATGCTTCTCGCGCTCATTTCCTT
CCTGTTCGTACTCGGACGCTATATTAAACGTTTGAACCAGTTCAGCAAGCCGATGCTCTTTGCGATTGCAGCCGGTGGAC
CTCTTGCCATGGCGGCGATTGAGTTTGGGTGGTTCTTCGCAGAGTTTGGTCGTCAACCTTGGGCGTTATATGAGTTGATG
CGTACGAGTGAGGCAGCTACGACATCAGCGAACGTCGGTTGGATGCTTGTCGCTTTCGCGATCCTCTACGCGGTACTCGG
AACAGTGACTGTGGTTGTCCTATCACGCCTGTTCAAAGAGAATCCGGTAGGAAAAGAACTAAAACAATCCGAGCATCGTG
GTGAAGCGATGTTTGCGGATGAAGTGTGA

Upstream 100 bases:

>100_bases
ATAAAATCATTATGATGTAAGTATCGAAGGGTATTCATCTGTGATTGTCGTTTCATACATGGGTTCGAAGCGATAGAGAG
AGATAGGAGGTAATCAATAG

Downstream 100 bases:

>100_bases
TCGGAGGGTATGACATGCAAATTCAAGAATTAGGGATTGCCGTCTTATGGACGTTTCTATACGGCTACCTCATCGTCGCA
TCGATTGACTTCGGTGCAGG

Product: cytochrome bd ubiquinol oxidase subunit I

Products: ubiquinone-8; H2O [C]

Alternate protein names: NA

Number of amino acids: Translated: 462; Mature: 462

Protein sequence:

>462_residues
MFQDPVLMSRALTALTLGFHVIFATLGVGVPLLILLAEFLGIRKKDPKYTLMARRWSRGYVVTVAVGVVTGTAIGLQLSL
LWPNLMRVAGQTIALPLFMETFAFFFEAIFLGIYLYTWDRFKNPWHHMLLGIPVAVGALFSGFFITTVNSFMNQPVGFDI
VDGRLANVSPLEAMFSPAMPTKMAHVLTSAILTSAFILAAIAAVQLLRQRRNQLDKMSIEYHKKGLRLTMTVALIFAIAT
ALVGDFSGKYLAKYQPDKLAAAEWHFETSSEAELILGGWLEDDGQGGYEVRGALKIPYALSILAGGVPNYEVTGLNEFAK
EDQPPLFVHYLFDAMVGIGMLLALISFLFVLGRYIKRLNQFSKPMLFAIAAGGPLAMAAIEFGWFFAEFGRQPWALYELM
RTSEAATTSANVGWMLVAFAILYAVLGTVTVVVLSRLFKENPVGKELKQSEHRGEAMFADEV

Sequences:

>Translated_462_residues
MFQDPVLMSRALTALTLGFHVIFATLGVGVPLLILLAEFLGIRKKDPKYTLMARRWSRGYVVTVAVGVVTGTAIGLQLSL
LWPNLMRVAGQTIALPLFMETFAFFFEAIFLGIYLYTWDRFKNPWHHMLLGIPVAVGALFSGFFITTVNSFMNQPVGFDI
VDGRLANVSPLEAMFSPAMPTKMAHVLTSAILTSAFILAAIAAVQLLRQRRNQLDKMSIEYHKKGLRLTMTVALIFAIAT
ALVGDFSGKYLAKYQPDKLAAAEWHFETSSEAELILGGWLEDDGQGGYEVRGALKIPYALSILAGGVPNYEVTGLNEFAK
EDQPPLFVHYLFDAMVGIGMLLALISFLFVLGRYIKRLNQFSKPMLFAIAAGGPLAMAAIEFGWFFAEFGRQPWALYELM
RTSEAATTSANVGWMLVAFAILYAVLGTVTVVVLSRLFKENPVGKELKQSEHRGEAMFADEV
>Mature_462_residues
MFQDPVLMSRALTALTLGFHVIFATLGVGVPLLILLAEFLGIRKKDPKYTLMARRWSRGYVVTVAVGVVTGTAIGLQLSL
LWPNLMRVAGQTIALPLFMETFAFFFEAIFLGIYLYTWDRFKNPWHHMLLGIPVAVGALFSGFFITTVNSFMNQPVGFDI
VDGRLANVSPLEAMFSPAMPTKMAHVLTSAILTSAFILAAIAAVQLLRQRRNQLDKMSIEYHKKGLRLTMTVALIFAIAT
ALVGDFSGKYLAKYQPDKLAAAEWHFETSSEAELILGGWLEDDGQGGYEVRGALKIPYALSILAGGVPNYEVTGLNEFAK
EDQPPLFVHYLFDAMVGIGMLLALISFLFVLGRYIKRLNQFSKPMLFAIAAGGPLAMAAIEFGWFFAEFGRQPWALYELM
RTSEAATTSANVGWMLVAFAILYAVLGTVTVVVLSRLFKENPVGKELKQSEHRGEAMFADEV

Specific function: Probable cytochrome [H]

COG id: COG1271

COG function: function code C; Cytochrome bd-type quinol oxidase, subunit 1

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the cytochrome ubiquinol oxidase subunit 1 family [H]

Homologues:

Organism=Escherichia coli, GI1787212, Length=327, Percent_Identity=30.8868501529052, Blast_Score=125, Evalue=7e-30,
Organism=Escherichia coli, GI87081779, Length=324, Percent_Identity=27.4691358024691, Blast_Score=117, Evalue=1e-27,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002585 [H]

Pfam domain/function: PF01654 Bac_Ubq_Cox [H]

EC number: 1.10.3.- [C]

Molecular weight: Translated: 51013; Mature: 51013

Theoretical pI: Translated: 8.61; Mature: 8.61

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
4.1 %Met     (Translated Protein)
4.1 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
4.1 %Met     (Mature Protein)
4.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure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HHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHCCCCCCCCCC
>Mature Secondary Structure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HHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: Fe [C]

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: ubiquinol-8; O2 [C]

Specific reaction: ubiquinol-8 + O2 = ubiquinone-8 + H2O [C]

General reaction: Oxidoreductases; Acting on diphenols and related substances as donors; With oxygen as acceptor [C]

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 9387221; 9384377 [H]