| Definition | Exiguobacterium sp. AT1b, complete genome. |
|---|---|
| Accession | NC_012673 |
| Length | 2,999,895 |
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The map label for this gene is 229918464
Identifier: 229918464
GI number: 229918464
Start: 2723664
End: 2724437
Strand: Reverse
Name: 229918464
Synonym: EAT1b_2751
Alternate gene names: NA
Gene position: 2724437-2723664 (Counterclockwise)
Preceding gene: 229918465
Following gene: 229918460
Centisome position: 90.82
GC content: 45.22
Gene sequence:
>774_bases ATGGAACTTGAACAATGTAATGGGTCATCCTGTTCACTGGAAGAAACTCCTATTCAAGTAACGTATAAGCCATTGGAGTT ATTCTATTTCATGGACATCTCAAGTCCTGAGAACTTTCATGTGATGACACTGATCAAAAAGTTAGAGATTGAATACGGAC ACGTGATTCGTTTTCGAATGGTCTCTACCGTTCCTAGCTGTGTTGGCGGATGTCAGGAAGAAGTTCGCCTTCTCACCATG ATCAAAGCGCTGGAATTACAAGGGAAACGTCATGCGATGCGCTTCTTGCGTCATTTGCATGTGAATGATCTATTCTCTGG TGAACAACTTGGTTCAATCGATTTATGGGAAATCGCACGTTCTTTCGAAGAGTATGGCCTTGATTTAAGTGAACTCGAAG CCGATCTTCAATCGAACCAGCTCTTGAATGCATTGGCTGTCGACCATCAAGTGTTGAAAGATTGGGAGATTGAGTCATTG CCCGCACTCACATTCGTGACGCGCGATGAAGCATTGAAGATTGAAGGGGTTTATCCGTACGACGTCTATCAATCGGTCAT GACTGAATTGTTAGGTTATGCACCGAGCCGTTCGACCGATTGGGATGTAGCCAAAGTGTTGGCACGCTATGATGCTTCGA CCATCACAGAGCTATCGTACATTCTAGACTTGGAGAAGACAGTGATTGAACGCGAATTGAAGAAGCTCTCCCTACAACAG CGTTGCCGTCCTGTGCCAGGATGTAGCGGTGAAGCGTGGGCTCAAACGAAATAA
Upstream 100 bases:
>100_bases GGTTGGAAGGTTGAGCAGATACATTGCCAACCTTTTTTTTTCGTTGCTACAATGAGTTTACAAAGTTAAATGAGTTTTTT GACGAGAGGAGGCGACACAA
Downstream 100 bases:
>100_bases AAAAGAACCCCATGGCCGGGGAGCCATGGGGTTTTTGACGTCTCAAGCGGGGACAAGAGACATCGAACCTTGAGGCCCGG GGAAGGCCTACAAGATGGGA
Product: polyketide biosynthesis dithiol-disulfide isomerase-like protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 257; Mature: 257
Protein sequence:
>257_residues MELEQCNGSSCSLEETPIQVTYKPLELFYFMDISSPENFHVMTLIKKLEIEYGHVIRFRMVSTVPSCVGGCQEEVRLLTM IKALELQGKRHAMRFLRHLHVNDLFSGEQLGSIDLWEIARSFEEYGLDLSELEADLQSNQLLNALAVDHQVLKDWEIESL PALTFVTRDEALKIEGVYPYDVYQSVMTELLGYAPSRSTDWDVAKVLARYDASTITELSYILDLEKTVIERELKKLSLQQ RCRPVPGCSGEAWAQTK
Sequences:
>Translated_257_residues MELEQCNGSSCSLEETPIQVTYKPLELFYFMDISSPENFHVMTLIKKLEIEYGHVIRFRMVSTVPSCVGGCQEEVRLLTM IKALELQGKRHAMRFLRHLHVNDLFSGEQLGSIDLWEIARSFEEYGLDLSELEADLQSNQLLNALAVDHQVLKDWEIESL PALTFVTRDEALKIEGVYPYDVYQSVMTELLGYAPSRSTDWDVAKVLARYDASTITELSYILDLEKTVIERELKKLSLQQ RCRPVPGCSGEAWAQTK >Mature_257_residues MELEQCNGSSCSLEETPIQVTYKPLELFYFMDISSPENFHVMTLIKKLEIEYGHVIRFRMVSTVPSCVGGCQEEVRLLTM IKALELQGKRHAMRFLRHLHVNDLFSGEQLGSIDLWEIARSFEEYGLDLSELEADLQSNQLLNALAVDHQVLKDWEIESL PALTFVTRDEALKIEGVYPYDVYQSVMTELLGYAPSRSTDWDVAKVLARYDASTITELSYILDLEKTVIERELKKLSLQQ RCRPVPGCSGEAWAQTK
Specific function: Unknown
COG id: COG2761
COG function: function code Q; Predicted dithiol-disulfide isomerase involved in polyketide biosynthesis
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the UPF0413 family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR023169 - InterPro: IPR012336 - InterPro: IPR012335 [H]
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 29417; Mature: 29417
Theoretical pI: Translated: 4.58; Mature: 4.58
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.3 %Cys (Translated Protein) 2.7 %Met (Translated Protein) 5.1 %Cys+Met (Translated Protein) 2.3 %Cys (Mature Protein) 2.7 %Met (Mature Protein) 5.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MELEQCNGSSCSLEETPIQVTYKPLELFYFMDISSPENFHVMTLIKKLEIEYGHVIRFRM CCCCCCCCCCCCCCCCCEEEEEEEEEEEEEEECCCCCCCHHHHHHHHHHHCCCHHHHHHH VSTVPSCVGGCQEEVRLLTMIKALELQGKRHAMRFLRHLHVNDLFSGEQLGSIDLWEIAR HHHHHHHHHCHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHH SFEEYGLDLSELEADLQSNQLLNALAVDHQVLKDWEIESLPALTFVTRDEALKIEGVYPY HHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEECCCCEEECCCCCH DVYQSVMTELLGYAPSRSTDWDVAKVLARYDASTITELSYILDLEKTVIERELKKLSLQQ HHHHHHHHHHHCCCCCCCCCHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH RCRPVPGCSGEAWAQTK HCCCCCCCCCCCCCCCC >Mature Secondary Structure MELEQCNGSSCSLEETPIQVTYKPLELFYFMDISSPENFHVMTLIKKLEIEYGHVIRFRM CCCCCCCCCCCCCCCCCEEEEEEEEEEEEEEECCCCCCCHHHHHHHHHHHCCCHHHHHHH VSTVPSCVGGCQEEVRLLTMIKALELQGKRHAMRFLRHLHVNDLFSGEQLGSIDLWEIAR HHHHHHHHHCHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHH SFEEYGLDLSELEADLQSNQLLNALAVDHQVLKDWEIESLPALTFVTRDEALKIEGVYPY HHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEECCCCEEECCCCCH DVYQSVMTELLGYAPSRSTDWDVAKVLARYDASTITELSYILDLEKTVIERELKKLSLQQ HHHHHHHHHHHCCCCCCCCCHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH RCRPVPGCSGEAWAQTK HCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA