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The map label for this gene is yrvM [H]

Identifier: 229918426

GI number: 229918426

Start: 2683784

End: 2684551

Strand: Direct

Name: yrvM [H]

Synonym: EAT1b_2713

Alternate gene names: 229918426

Gene position: 2683784-2684551 (Clockwise)

Preceding gene: 229918425

Following gene: 229918428

Centisome position: 89.46

GC content: 48.96

Gene sequence:

>768_bases
ATGTTACACCAGTTTTCACGTAATGAATTGGCCATCGGCTCTGAAGGCCTTGATGCTTTAAAGAATAAAACGGTCGCGAT
TTTAGGAATCGGTGGCGTCGGCTCGTTCGCGGCAGAGGCACTTGCACGTAGCGGTGTCGGACGCATCGTCCTTGTCGATA
AAGACGACATCGATATCACAAACGTCAACCGTCAAATCCATGCACTGTTGTCGACGGTCGGTCAACCGAAAGTCGAAGCG
ATGGGCAAGCGTCTCCTCGACATCAACCCGGACTTAGACCTCGTCCAATTGAAAATGTTTTATACAGAAGAGACATACGA
AGAGTTCTTCGCTCAAAAGATCGACTACGTCATCGATGCATCAGACACGATCATTTATAAGATTCATTTAATCGTAGAAT
GTAAGCGTCGCGGCATCCCGGTCATCTCGAGTATGGGGATGGCGAACAAAATGGACCCGACACGTATTAAAGTCGTTGAC
ATTAAAGATACGTCATACGATCCAATCGCGAAGATGGTCCGTACCCGTCTACGTAAAGAAAAAATCTACAAAGGCGTCCC
AGTCGTCTTCTCAGATGAGTCTCCCATCGTGACACGCGAAGACGTGAACGAAGTCGTCGGGAAGAAAGACGCGCCGATCC
GCAAAGCGAAGATGCCACCGAGCTCGAACGCGTTCGTTCCATCGGTTGCAGGGCTTGTCGCTGCCGGCTATGTCATTAAC
GACTTGCTTGAAAAAGCGGGCGTCGAAATCAATCGCATCCAAAAATAA

Upstream 100 bases:

>100_bases
CCCATCGATTTTTTTGTAAATACGTCGCGAGACGTCTTTTTTTTGAATATAATTCCGAGTAAAATAGTATGAGAAAATAG
GATTAGTTGGAGGAAGAAAT

Downstream 100 bases:

>100_bases
AACGACGCGGGCTCATTTCGAGTCGCGTCGTTTTTCCCAATAGTCGAGCCGCTTTTGGATTTGTTGCTCGAATCCACGTG
GCGTCGGTTTATAGTAATTT

Product: UBA/THIF-type NAD/FAD binding protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 255; Mature: 255

Protein sequence:

>255_residues
MLHQFSRNELAIGSEGLDALKNKTVAILGIGGVGSFAAEALARSGVGRIVLVDKDDIDITNVNRQIHALLSTVGQPKVEA
MGKRLLDINPDLDLVQLKMFYTEETYEEFFAQKIDYVIDASDTIIYKIHLIVECKRRGIPVISSMGMANKMDPTRIKVVD
IKDTSYDPIAKMVRTRLRKEKIYKGVPVVFSDESPIVTREDVNEVVGKKDAPIRKAKMPPSSNAFVPSVAGLVAAGYVIN
DLLEKAGVEINRIQK

Sequences:

>Translated_255_residues
MLHQFSRNELAIGSEGLDALKNKTVAILGIGGVGSFAAEALARSGVGRIVLVDKDDIDITNVNRQIHALLSTVGQPKVEA
MGKRLLDINPDLDLVQLKMFYTEETYEEFFAQKIDYVIDASDTIIYKIHLIVECKRRGIPVISSMGMANKMDPTRIKVVD
IKDTSYDPIAKMVRTRLRKEKIYKGVPVVFSDESPIVTREDVNEVVGKKDAPIRKAKMPPSSNAFVPSVAGLVAAGYVIN
DLLEKAGVEINRIQK
>Mature_255_residues
MLHQFSRNELAIGSEGLDALKNKTVAILGIGGVGSFAAEALARSGVGRIVLVDKDDIDITNVNRQIHALLSTVGQPKVEA
MGKRLLDINPDLDLVQLKMFYTEETYEEFFAQKIDYVIDASDTIIYKIHLIVECKRRGIPVISSMGMANKMDPTRIKVVD
IKDTSYDPIAKMVRTRLRKEKIYKGVPVVFSDESPIVTREDVNEVVGKKDAPIRKAKMPPSSNAFVPSVAGLVAAGYVIN
DLLEKAGVEINRIQK

Specific function: Unknown

COG id: COG1179

COG function: function code H; Dinucleotide-utilizing enzymes involved in molybdopterin and thiamine biosynthesis family 1

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the hesA/moeB/thiF family [H]

Homologues:

Organism=Escherichia coli, GI1789177, Length=255, Percent_Identity=35.2941176470588, Blast_Score=155, Evalue=2e-39,
Organism=Escherichia coli, GI1787048, Length=149, Percent_Identity=32.8859060402685, Blast_Score=80, Evalue=1e-16,
Organism=Escherichia coli, GI87082356, Length=142, Percent_Identity=32.3943661971831, Blast_Score=80, Evalue=1e-16,
Organism=Saccharomyces cerevisiae, GI6321790, Length=202, Percent_Identity=36.1386138613861, Blast_Score=135, Evalue=5e-33,
Organism=Saccharomyces cerevisiae, GI6322825, Length=263, Percent_Identity=31.9391634980989, Blast_Score=113, Evalue=3e-26,
Organism=Saccharomyces cerevisiae, GI6321903, Length=138, Percent_Identity=28.9855072463768, Blast_Score=64, Evalue=3e-11,
Organism=Drosophila melanogaster, GI24582879, Length=142, Percent_Identity=33.0985915492958, Blast_Score=72, Evalue=2e-13,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR009036
- InterPro:   IPR016040
- InterPro:   IPR000594 [H]

Pfam domain/function: PF00899 ThiF [H]

EC number: NA

Molecular weight: Translated: 28140; Mature: 28140

Theoretical pI: Translated: 8.87; Mature: 8.87

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
3.1 %Met     (Translated Protein)
3.5 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
3.1 %Met     (Mature Protein)
3.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLHQFSRNELAIGSEGLDALKNKTVAILGIGGVGSFAAEALARSGVGRIVLVDKDDIDIT
CCCCCCCCCEEECCCCHHHHCCCEEEEEEECCCHHHHHHHHHHCCCCEEEEEECCCCCEE
NVNRQIHALLSTVGQPKVEAMGKRLLDINPDLDLVQLKMFYTEETYEEFFAQKIDYVIDA
HHHHHHHHHHHHCCCCHHHHHCCHHEECCCCCCEEEEEEHHHHHHHHHHHHHHHHEEECC
SDTIIYKIHLIVECKRRGIPVISSMGMANKMDPTRIKVVDIKDTSYDPIAKMVRTRLRKE
CCEEEEEEEEEEEEHHCCCCEEECCCCCCCCCCCEEEEEEECCCCCCHHHHHHHHHHHHH
KIYKGVPVVFSDESPIVTREDVNEVVGKKDAPIRKAKMPPSSNAFVPSVAGLVAAGYVIN
HHHCCCCEEECCCCCCEEHHHHHHHHCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHH
DLLEKAGVEINRIQK
HHHHHHCCCHHHCCC
>Mature Secondary Structure
MLHQFSRNELAIGSEGLDALKNKTVAILGIGGVGSFAAEALARSGVGRIVLVDKDDIDIT
CCCCCCCCCEEECCCCHHHHCCCEEEEEEECCCHHHHHHHHHHCCCCEEEEEECCCCCEE
NVNRQIHALLSTVGQPKVEAMGKRLLDINPDLDLVQLKMFYTEETYEEFFAQKIDYVIDA
HHHHHHHHHHHHCCCCHHHHHCCHHEECCCCCCEEEEEEHHHHHHHHHHHHHHHHEEECC
SDTIIYKIHLIVECKRRGIPVISSMGMANKMDPTRIKVVDIKDTSYDPIAKMVRTRLRKE
CCEEEEEEEEEEEEHHCCCCEEECCCCCCCCCCCEEEEEEECCCCCCHHHHHHHHHHHHH
KIYKGVPVVFSDESPIVTREDVNEVVGKKDAPIRKAKMPPSSNAFVPSVAGLVAAGYVIN
HHHCCCCEEECCCCCCEEHHHHHHHHCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHH
DLLEKAGVEINRIQK
HHHHHHCCCHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]