Definition Exiguobacterium sp. AT1b, complete genome.
Accession NC_012673
Length 2,999,895

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The map label for this gene is 229918380

Identifier: 229918380

GI number: 229918380

Start: 2635904

End: 2637475

Strand: Direct

Name: 229918380

Synonym: EAT1b_2665

Alternate gene names: NA

Gene position: 2635904-2637475 (Clockwise)

Preceding gene: 229918379

Following gene: 229918381

Centisome position: 87.87

GC content: 52.67

Gene sequence:

>1572_bases
ATGAGTCGTGGGATAGAGAAAGGGACGGTCACGTATTTTTCGTTTGATGCGCTCAGCATCCACGGGGCCGTCATCAAACA
AGGGGTGTTCAAACGAAGCGCCTCGGTTCAGTTAGCAAAAGATGCATACGGAGATGGGAAGATTCTCGATGAGACGGCGT
TCAGTCTCGCTTTCGATGAGCTCTGTCGCAAATTGAAAGTAAGACGTGGAATGACGTGTGCCATCGCATTGGACGAGACC
GAAGTGTTGTCACGAAAAGTCGAGATTCCTTCTTCGATTCCGAAGGACGAGATTCGTGGCTATCTCTTCATGGAAATCGG
GAGCTCGATCATCTTGCCGTTCGATGATGTCTCGTTCGATTATGAAGTGTTAGGAGAAGACGGAGTCAAGACGGACGTCA
TGTTGCATGCCGTTTCGATTGAATTGACGAAATCGCTCCGCGCGTATATGAAGAAACGCGGTCTAGCGTTGAAGAAAATC
ACGCCACGTTCTGTCGCGGTCGCCAATGGGGTCATGCGTTTATCGGAGATTGATCCGCTTCAATCGACACTACTCTGGCA
TATCACGCCGTTTTCGCATCAATTGCTCGTCCTTGAGGAAGGGCAGATCCGTTTCATCCGCTCGATCGAACTAGACCTCC
CGTATCAAGTCGGGACGAAAGATGGTGTCGTGACCTATACATATGATGGGACAGGCGAGATGAAGGCCAATCAGTTGGAT
GACTGGTTGAACGAACTCGCTCGTTTCCTCGACTTCTATCGGTATTCTCTGCGGACGGACGGTCGGGCTATCGATGAGTT
ATACGTTTCGGGAACTGTCCCGGAAGTCGATGACCTCGTCCGTATGATTCAGTCTGAATCCCTCGTCTCTGTGACGCGCG
TCGAGCAACCGCTCGCTATCGCCCATGGGACACCGCTATCGCATCAAATGTTGCCACTCCTCGGGATGGCGATGCTTCAA
CGCGATCGGGACACGAACTTCATCAACTCGACAGACGTGACGCTCCGCTGGCCAATCGTGACGGGTCTCGTCGCCCTTCT
CCTTGGAGGAGGGGCAGCCGGATACTTGTATTATGAGGTCGGCCAACTTGAGGCAGAACAGACGCGAATCGAAGAAGAGT
TACAGCTCGTCCAAATTTATCAAACGGAACAAGTGAATTCGAAAGCGCAACAAGTGCTCTCGCTCGACCAGACCGTGACG
GCGTTGACCGACATGGAAAAGGATGCGGTGCCTGCACTGCGCGCGTTGACTGAGCAGTTGCCGCCGACGGGCTACGTCTT
GACGTATAACTACGCGGACGGCTCCATCATGAGCGTTCGGACCCAGTTCGAGACGTTAGAGGACTTGAACGCATTCCAGC
GCTCGCTTATGACCGATGAGCGATTCCTCGACGTCAAACTCCTCGGTGTGACGACGGAGTTGAAAGCGGATGTGGATTCA
GAGGAAGAGGAGAACTCGTTAGAAGAAGAGCCGCTCCCACGCTATATCGGAGAGTTCACGTTCATGTTCCAAGACGTTGA
GGACGAGTTAACAGAGGAAGAGGAGACGGATGAGGAGGTGGTGAGTCAATGA

Upstream 100 bases:

>100_bases
TCCGTTCGTCCCGTCGATTGCGCTCGGGACGATGTTGACGTTTTGGTTTAGTGAAAGTTTTTTTGATTGGTATTTTGAGT
TGATGTAGGGGGAAACGATC

Downstream 100 bases:

>100_bases
AACGTTCGACAATCTATGCGTTATTTGCGATTTGCCTCCTTGCCGCAATCATCGCACCGGCTTACTTTGGCTATACGTAT
TACGTCAAACAAGGAGAAGT

Product: Fimbrial assembly family protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 523; Mature: 522

Protein sequence:

>523_residues
MSRGIEKGTVTYFSFDALSIHGAVIKQGVFKRSASVQLAKDAYGDGKILDETAFSLAFDELCRKLKVRRGMTCAIALDET
EVLSRKVEIPSSIPKDEIRGYLFMEIGSSIILPFDDVSFDYEVLGEDGVKTDVMLHAVSIELTKSLRAYMKKRGLALKKI
TPRSVAVANGVMRLSEIDPLQSTLLWHITPFSHQLLVLEEGQIRFIRSIELDLPYQVGTKDGVVTYTYDGTGEMKANQLD
DWLNELARFLDFYRYSLRTDGRAIDELYVSGTVPEVDDLVRMIQSESLVSVTRVEQPLAIAHGTPLSHQMLPLLGMAMLQ
RDRDTNFINSTDVTLRWPIVTGLVALLLGGGAAGYLYYEVGQLEAEQTRIEEELQLVQIYQTEQVNSKAQQVLSLDQTVT
ALTDMEKDAVPALRALTEQLPPTGYVLTYNYADGSIMSVRTQFETLEDLNAFQRSLMTDERFLDVKLLGVTTELKADVDS
EEEENSLEEEPLPRYIGEFTFMFQDVEDELTEEEETDEEVVSQ

Sequences:

>Translated_523_residues
MSRGIEKGTVTYFSFDALSIHGAVIKQGVFKRSASVQLAKDAYGDGKILDETAFSLAFDELCRKLKVRRGMTCAIALDET
EVLSRKVEIPSSIPKDEIRGYLFMEIGSSIILPFDDVSFDYEVLGEDGVKTDVMLHAVSIELTKSLRAYMKKRGLALKKI
TPRSVAVANGVMRLSEIDPLQSTLLWHITPFSHQLLVLEEGQIRFIRSIELDLPYQVGTKDGVVTYTYDGTGEMKANQLD
DWLNELARFLDFYRYSLRTDGRAIDELYVSGTVPEVDDLVRMIQSESLVSVTRVEQPLAIAHGTPLSHQMLPLLGMAMLQ
RDRDTNFINSTDVTLRWPIVTGLVALLLGGGAAGYLYYEVGQLEAEQTRIEEELQLVQIYQTEQVNSKAQQVLSLDQTVT
ALTDMEKDAVPALRALTEQLPPTGYVLTYNYADGSIMSVRTQFETLEDLNAFQRSLMTDERFLDVKLLGVTTELKADVDS
EEEENSLEEEPLPRYIGEFTFMFQDVEDELTEEEETDEEVVSQ
>Mature_522_residues
SRGIEKGTVTYFSFDALSIHGAVIKQGVFKRSASVQLAKDAYGDGKILDETAFSLAFDELCRKLKVRRGMTCAIALDETE
VLSRKVEIPSSIPKDEIRGYLFMEIGSSIILPFDDVSFDYEVLGEDGVKTDVMLHAVSIELTKSLRAYMKKRGLALKKIT
PRSVAVANGVMRLSEIDPLQSTLLWHITPFSHQLLVLEEGQIRFIRSIELDLPYQVGTKDGVVTYTYDGTGEMKANQLDD
WLNELARFLDFYRYSLRTDGRAIDELYVSGTVPEVDDLVRMIQSESLVSVTRVEQPLAIAHGTPLSHQMLPLLGMAMLQR
DRDTNFINSTDVTLRWPIVTGLVALLLGGGAAGYLYYEVGQLEAEQTRIEEELQLVQIYQTEQVNSKAQQVLSLDQTVTA
LTDMEKDAVPALRALTEQLPPTGYVLTYNYADGSIMSVRTQFETLEDLNAFQRSLMTDERFLDVKLLGVTTELKADVDSE
EEENSLEEEPLPRYIGEFTFMFQDVEDELTEEEETDEEVVSQ

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 58823; Mature: 58691

Theoretical pI: Translated: 4.24; Mature: 4.24

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
2.9 %Met     (Translated Protein)
3.3 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
2.7 %Met     (Mature Protein)
3.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSRGIEKGTVTYFSFDALSIHGAVIKQGVFKRSASVQLAKDAYGDGKILDETAFSLAFDE
CCCCCCCCEEEEEEECHHHHHHHHHHHHHHHCCCCEEEHHHCCCCCCEEHHHHHHHHHHH
LCRKLKVRRGMTCAIALDETEVLSRKVEIPSSIPKDEIRGYLFMEIGSSIILPFDDVSFD
HHHHHHHHCCCEEEEEECHHHHHHHHCCCCCCCCHHHHCEEEEEECCCEEEEECCCCCCC
YEVLGEDGVKTDVMLHAVSIELTKSLRAYMKKRGLALKKITPRSVAVANGVMRLSEIDPL
CEECCCCCCCHHHEEEEHHHHHHHHHHHHHHHCCCEEECCCCCHHHHHHHHHHHHHCCHH
QSTLLWHITPFSHQLLVLEEGQIRFIRSIELDLPYQVGTKDGVVTYTYDGTGEMKANQLD
HHHHEEEECCCCCEEEEEECCCEEEEEEEEECCCEEECCCCCEEEEEECCCCCCCHHHHH
DWLNELARFLDFYRYSLRTDGRAIDELYVSGTVPEVDDLVRMIQSESLVSVTRVEQPLAI
HHHHHHHHHHHHHHHHHCCCCCCHHHHEECCCCCCHHHHHHHHHCCCHHHHHHHCCCEEE
AHGTPLSHQMLPLLGMAMLQRDRDTNFINSTDVTLRWPIVTGLVALLLGGGAAGYLYYEV
ECCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCEEECHHHHHHHHHHHCCCCCEEEEEEE
GQLEAEQTRIEEELQLVQIYQTEQVNSKAQQVLSLDQTVTALTDMEKDAVPALRALTEQL
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHC
PPTGYVLTYNYADGSIMSVRTQFETLEDLNAFQRSLMTDERFLDVKLLGVTTELKADVDS
CCCCEEEEEECCCCCEEEHHHHHHHHHHHHHHHHHHCCCCCEEEEEEEEEEEEHHCCCCC
EEEENSLEEEPLPRYIGEFTFMFQDVEDELTEEEETDEEVVSQ
CHHHCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHCC
>Mature Secondary Structure 
SRGIEKGTVTYFSFDALSIHGAVIKQGVFKRSASVQLAKDAYGDGKILDETAFSLAFDE
CCCCCCCEEEEEEECHHHHHHHHHHHHHHHCCCCEEEHHHCCCCCCEEHHHHHHHHHHH
LCRKLKVRRGMTCAIALDETEVLSRKVEIPSSIPKDEIRGYLFMEIGSSIILPFDDVSFD
HHHHHHHHCCCEEEEEECHHHHHHHHCCCCCCCCHHHHCEEEEEECCCEEEEECCCCCCC
YEVLGEDGVKTDVMLHAVSIELTKSLRAYMKKRGLALKKITPRSVAVANGVMRLSEIDPL
CEECCCCCCCHHHEEEEHHHHHHHHHHHHHHHCCCEEECCCCCHHHHHHHHHHHHHCCHH
QSTLLWHITPFSHQLLVLEEGQIRFIRSIELDLPYQVGTKDGVVTYTYDGTGEMKANQLD
HHHHEEEECCCCCEEEEEECCCEEEEEEEEECCCEEECCCCCEEEEEECCCCCCCHHHHH
DWLNELARFLDFYRYSLRTDGRAIDELYVSGTVPEVDDLVRMIQSESLVSVTRVEQPLAI
HHHHHHHHHHHHHHHHHCCCCCCHHHHEECCCCCCHHHHHHHHHCCCHHHHHHHCCCEEE
AHGTPLSHQMLPLLGMAMLQRDRDTNFINSTDVTLRWPIVTGLVALLLGGGAAGYLYYEV
ECCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCEEECHHHHHHHHHHHCCCCCEEEEEEE
GQLEAEQTRIEEELQLVQIYQTEQVNSKAQQVLSLDQTVTALTDMEKDAVPALRALTEQL
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHC
PPTGYVLTYNYADGSIMSVRTQFETLEDLNAFQRSLMTDERFLDVKLLGVTTELKADVDS
CCCCEEEEEECCCCCEEEHHHHHHHHHHHHHHHHHHCCCCCEEEEEEEEEEEEHHCCCCC
EEEENSLEEEPLPRYIGEFTFMFQDVEDELTEEEETDEEVVSQ
CHHHCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA