| Definition | Exiguobacterium sp. AT1b, complete genome. |
|---|---|
| Accession | NC_012673 |
| Length | 2,999,895 |
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The map label for this gene is 229918340
Identifier: 229918340
GI number: 229918340
Start: 2591846
End: 2592622
Strand: Direct
Name: 229918340
Synonym: EAT1b_2625
Alternate gene names: NA
Gene position: 2591846-2592622 (Clockwise)
Preceding gene: 229918339
Following gene: 229918342
Centisome position: 86.4
GC content: 44.79
Gene sequence:
>777_bases ATGAGACAGATTACGACAGACGTGGAGAATACAATCGCTTCATTCGTGAGAGCGATTGATGAATTTCTACCAACCGTTCA GCATATATATATTCATGGATCATTAGCGATGGGTGGTTTTCATCCGAAACGAAGTGATGTAGATTTGTTGCTCGTCGTAT CAAACGCATTGACTCGGGAGGAACGACAAAAACTCATCGACTGCTGTCTCTCGTACTCCAACGAACCATATCCGCTCGAA CTGAGCATCATGACGATGGCGCAGCTAGAAGATTGGTATCATCCAAGTCCTTTTGAGTTTCACTATAGTGAAGGGTGGCG TTCACGTTTTGAAGAAGCTAGTAGGGAAGAAAGAACCGAATTGCAACAAGGATTTACCGATCCTGATTTGGCGGCTCACG TCCTAGTGATTTTAGAGCGTGGTATCACATGGCGAGGGCAACCGCTTCATAAACTCCTTTCTGGATTCGATTCAGCTCAT TTTTCTGATGCGATTCGAGCGGATGCGCTCGATTGTCTTGACTCGATTGAAGAACAGACGGTGTATAGCGTATTGAACTT GATACGTGGCCTGGCCTATGAACAAGAACGTGTTCTGCTCTCAAAACAAGAAGCACTCCATTGGTTAGTGAAGAACGGAC ATTTTCCAGGAAATATTGTCGAAGTTGTTCGTAAGGCGACTCGGAACTATGAAGGGGGAAGTGTGACGTTTCATCGACAA GAACTCAATGAATTCCGTCGCTACATGCGTCAACAACTTCAGCGGAAACAAAAATAA
Upstream 100 bases:
>100_bases AACAGATTCGTCTGGCATCGCTCGAACAATTGAAGGAAGCGGGATTGCCGGAAAAATTAGCGGAGACCGTGCTTCAGTAC GTGCATGAGGAGACGGATGA
Downstream 100 bases:
>100_bases GAGTCGATGCGTTTGGCATCGACTCTTATTCGTAGTCGTCTTTTCGGTCTAGTTGGACGGTGATTTGGACAGCTTTTCGG GTTGGATCGGCATACCCTTC
Product: DNA polymerase beta domain protein region
Products: NA
Alternate protein names: Adenylyl Transferase; Nucleotidyltransferase
Number of amino acids: Translated: 258; Mature: 258
Protein sequence:
>258_residues MRQITTDVENTIASFVRAIDEFLPTVQHIYIHGSLAMGGFHPKRSDVDLLLVVSNALTREERQKLIDCCLSYSNEPYPLE LSIMTMAQLEDWYHPSPFEFHYSEGWRSRFEEASREERTELQQGFTDPDLAAHVLVILERGITWRGQPLHKLLSGFDSAH FSDAIRADALDCLDSIEEQTVYSVLNLIRGLAYEQERVLLSKQEALHWLVKNGHFPGNIVEVVRKATRNYEGGSVTFHRQ ELNEFRRYMRQQLQRKQK
Sequences:
>Translated_258_residues MRQITTDVENTIASFVRAIDEFLPTVQHIYIHGSLAMGGFHPKRSDVDLLLVVSNALTREERQKLIDCCLSYSNEPYPLE LSIMTMAQLEDWYHPSPFEFHYSEGWRSRFEEASREERTELQQGFTDPDLAAHVLVILERGITWRGQPLHKLLSGFDSAH FSDAIRADALDCLDSIEEQTVYSVLNLIRGLAYEQERVLLSKQEALHWLVKNGHFPGNIVEVVRKATRNYEGGSVTFHRQ ELNEFRRYMRQQLQRKQK >Mature_258_residues MRQITTDVENTIASFVRAIDEFLPTVQHIYIHGSLAMGGFHPKRSDVDLLLVVSNALTREERQKLIDCCLSYSNEPYPLE LSIMTMAQLEDWYHPSPFEFHYSEGWRSRFEEASREERTELQQGFTDPDLAAHVLVILERGITWRGQPLHKLLSGFDSAH FSDAIRADALDCLDSIEEQTVYSVLNLIRGLAYEQERVLLSKQEALHWLVKNGHFPGNIVEVVRKATRNYEGGSVTFHRQ ELNEFRRYMRQQLQRKQK
Specific function: Unknown
COG id: COG1708
COG function: function code R; Predicted nucleotidyltransferases
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 30008; Mature: 30008
Theoretical pI: Translated: 6.13; Mature: 6.13
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 1.9 %Met (Translated Protein) 3.1 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 1.9 %Met (Mature Protein) 3.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRQITTDVENTIASFVRAIDEFLPTVQHIYIHGSLAMGGFHPKRSDVDLLLVVSNALTRE CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHEECEEEECCCCCCCCCCCEEEHHHHHHHHH ERQKLIDCCLSYSNEPYPLELSIMTMAQLEDWYHPSPFEFHYSEGWRSRFEEASREERTE HHHHHHHHHHHCCCCCCCEEEHHHHHHHHHHCCCCCCCEECCCHHHHHHHHHHHHHHHHH LQQGFTDPDLAAHVLVILERGITWRGQPLHKLLSGFDSAHFSDAIRADALDCLDSIEEQT HHHCCCCHHHHHHHHHHHHCCCCCCCCHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHH VYSVLNLIRGLAYEQERVLLSKQEALHWLVKNGHFPGNIVEVVRKATRNYEGGSVTFHRQ HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHCCCCCCCEEEEHH ELNEFRRYMRQQLQRKQK HHHHHHHHHHHHHHHHCC >Mature Secondary Structure MRQITTDVENTIASFVRAIDEFLPTVQHIYIHGSLAMGGFHPKRSDVDLLLVVSNALTRE CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHEECEEEECCCCCCCCCCCEEEHHHHHHHHH ERQKLIDCCLSYSNEPYPLELSIMTMAQLEDWYHPSPFEFHYSEGWRSRFEEASREERTE HHHHHHHHHHHCCCCCCCEEEHHHHHHHHHHCCCCCCCEECCCHHHHHHHHHHHHHHHHH LQQGFTDPDLAAHVLVILERGITWRGQPLHKLLSGFDSAHFSDAIRADALDCLDSIEEQT HHHCCCCHHHHHHHHHHHHCCCCCCCCHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHH VYSVLNLIRGLAYEQERVLLSKQEALHWLVKNGHFPGNIVEVVRKATRNYEGGSVTFHRQ HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHCCCCCCCEEEEHH ELNEFRRYMRQQLQRKQK HHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA