Click here to switch to the map view.

The map label for this gene is ytrC [H]

Identifier: 229918324

GI number: 229918324

Start: 2576161

End: 2577291

Strand: Direct

Name: ytrC [H]

Synonym: EAT1b_2609

Alternate gene names: 229918324

Gene position: 2576161-2577291 (Clockwise)

Preceding gene: 229918323

Following gene: 229918325

Centisome position: 85.88

GC content: 44.39

Gene sequence:

>1131_bases
ATGTTGTCTAAGGTTTTGTTAAAGAAAGATTGGAAACAAGTGTCGCTGCTTTGGATGCTGCTCGTCTTCCTAGGCGTCGT
CGCCTTCACAGTGCCAGTTTGGACACAATTCGAACAGTTTGATGAACAGATTAAAGATGCACGAGCGAATTCTGTAGATT
ACGGGATCCCGTTTGAAGAAAGAGATCGCCTTACGGTTGAGTCCTTCTTTGATCTCGATTCAAGCATCGCCTACTATATT
GGGGATATTGGAAGTGTGATTCCTCTCGGTCCCGTTGTATTTTTGTTCGTCGTGTTTAGTGCACTCATGGCCACGTCGCT
CATTGGTGCCGAACGAAACAGTCAAATGTCGGATTTTTCGATGTCGCTTCCGTTCACCCGGACCCAGCAGTACATATCAA
AATGGGTAATGGGGGCAAGTGGAATCATCATGGCCACGCTGTTAGGAAGTATCGCGATGTTTGCATTGGTCGCCACTTCC
CGTTATTCCTTCTTATTAGAAGGGACCGTTTTAAAATCGGTGGTGATTGTCCTGTACATCGCCTTGATTGGCATCTCGTT
ATTCTCGTTGGCTTTATGGATGGGGTCGTTCGGTGGGGAATCGATTTCTCAATCGGTGTGGTCGTTTGTCGCCTTGATTT
TCCCGTTAGGTATTCTCGCATTGATTCAAGGATCGGCTTACTCGTTAACTGGTCGAGGTGATGCGTTGGGTTGGTTAATC
GATTCAGCTTATGAAAGTGTATTTATTCAAGCCATCTCACCACTTGGTAACTTGATGAATTTATCTTTATATGAATACAT
TCAATCCGATCAGTATTGGCAAGAGTTCGTCACGATTAGCATTCCATCGTCTATCGTCTTTATTGCCTTGTCATTCTGGT
TAGGAGCTTGGATGTACAATCGTGCACCACAAGAAAACAACGGTCGTTTCTTCATGTTCAACAACTGGTTATGGCTCGTT
CACATCATCATCGTTGGATGTATCGCGATGTTCACAGGAATTGTGTTCACGACGTTCACGTATGAAGCGAATAGCGTGTT
ATATATGATCGGCTTTTTAATTGGTGCGTTCTTGGCACACTTGCTCGCCAAACGCTTGCTTTACCGCTTTAACTTAAGAC
TCAAATCGTAA

Upstream 100 bases:

>100_bases
GAGCTCGAAGCGTTCATCGATTCATACAATCCGATGCTCATCGAAGAGATTCCGATGTCTCTTGAAGACGTCTTCCGTGT
CCAGTTAGGAGGAGAAGCCC

Downstream 100 bases:

>100_bases
GGAGGGACACCTATGAAACGCTTCTGTCTGTTGCTCGTACTCGTCATCTCACTGGCAGGGTGTATGAACCCCGAACCGGA
CGCCTTTGAATACAAAGGGG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 376; Mature: 376

Protein sequence:

>376_residues
MLSKVLLKKDWKQVSLLWMLLVFLGVVAFTVPVWTQFEQFDEQIKDARANSVDYGIPFEERDRLTVESFFDLDSSIAYYI
GDIGSVIPLGPVVFLFVVFSALMATSLIGAERNSQMSDFSMSLPFTRTQQYISKWVMGASGIIMATLLGSIAMFALVATS
RYSFLLEGTVLKSVVIVLYIALIGISLFSLALWMGSFGGESISQSVWSFVALIFPLGILALIQGSAYSLTGRGDALGWLI
DSAYESVFIQAISPLGNLMNLSLYEYIQSDQYWQEFVTISIPSSIVFIALSFWLGAWMYNRAPQENNGRFFMFNNWLWLV
HIIIVGCIAMFTGIVFTTFTYEANSVLYMIGFLIGAFLAHLLAKRLLYRFNLRLKS

Sequences:

>Translated_376_residues
MLSKVLLKKDWKQVSLLWMLLVFLGVVAFTVPVWTQFEQFDEQIKDARANSVDYGIPFEERDRLTVESFFDLDSSIAYYI
GDIGSVIPLGPVVFLFVVFSALMATSLIGAERNSQMSDFSMSLPFTRTQQYISKWVMGASGIIMATLLGSIAMFALVATS
RYSFLLEGTVLKSVVIVLYIALIGISLFSLALWMGSFGGESISQSVWSFVALIFPLGILALIQGSAYSLTGRGDALGWLI
DSAYESVFIQAISPLGNLMNLSLYEYIQSDQYWQEFVTISIPSSIVFIALSFWLGAWMYNRAPQENNGRFFMFNNWLWLV
HIIIVGCIAMFTGIVFTTFTYEANSVLYMIGFLIGAFLAHLLAKRLLYRFNLRLKS
>Mature_376_residues
MLSKVLLKKDWKQVSLLWMLLVFLGVVAFTVPVWTQFEQFDEQIKDARANSVDYGIPFEERDRLTVESFFDLDSSIAYYI
GDIGSVIPLGPVVFLFVVFSALMATSLIGAERNSQMSDFSMSLPFTRTQQYISKWVMGASGIIMATLLGSIAMFALVATS
RYSFLLEGTVLKSVVIVLYIALIGISLFSLALWMGSFGGESISQSVWSFVALIFPLGILALIQGSAYSLTGRGDALGWLI
DSAYESVFIQAISPLGNLMNLSLYEYIQSDQYWQEFVTISIPSSIVFIALSFWLGAWMYNRAPQENNGRFFMFNNWLWLV
HIIIVGCIAMFTGIVFTTFTYEANSVLYMIGFLIGAFLAHLLAKRLLYRFNLRLKS

Specific function: Part of the ABC transporter complex ytrBCDEF that plays a role in acetoin utilization during stationary phase and sporulation [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the ABC-5 integral membrane protein family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 42254; Mature: 42254

Theoretical pI: Translated: 5.06; Mature: 5.06

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
3.7 %Met     (Translated Protein)
4.0 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
3.7 %Met     (Mature Protein)
4.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLSKVLLKKDWKQVSLLWMLLVFLGVVAFTVPVWTQFEQFDEQIKDARANSVDYGIPFEE
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCC
RDRLTVESFFDLDSSIAYYIGDIGSVIPLGPVVFLFVVFSALMATSLIGAERNSQMSDFS
CCCCHHHHHHCCCCHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCC
MSLPFTRTQQYISKWVMGASGIIMATLLGSIAMFALVATSRYSFLLEGTVLKSVVIVLYI
CCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
ALIGISLFSLALWMGSFGGESISQSVWSFVALIFPLGILALIQGSAYSLTGRGDALGWLI
HHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCEEECCCCCHHHHHH
DSAYESVFIQAISPLGNLMNLSLYEYIQSDQYWQEFVTISIPSSIVFIALSFWLGAWMYN
HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHEECCHHHHHHHHHHHHHHHHHC
RAPQENNGRFFMFNNWLWLVHIIIVGCIAMFTGIVFTTFTYEANSVLYMIGFLIGAFLAH
CCCCCCCCEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHEECCCHHHHHHHHHHHHHHHH
LLAKRLLYRFNLRLKS
HHHHHHHHHHCCCCCC
>Mature Secondary Structure
MLSKVLLKKDWKQVSLLWMLLVFLGVVAFTVPVWTQFEQFDEQIKDARANSVDYGIPFEE
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCC
RDRLTVESFFDLDSSIAYYIGDIGSVIPLGPVVFLFVVFSALMATSLIGAERNSQMSDFS
CCCCHHHHHHCCCCHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCC
MSLPFTRTQQYISKWVMGASGIIMATLLGSIAMFALVATSRYSFLLEGTVLKSVVIVLYI
CCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
ALIGISLFSLALWMGSFGGESISQSVWSFVALIFPLGILALIQGSAYSLTGRGDALGWLI
HHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCEEECCCCCHHHHHH
DSAYESVFIQAISPLGNLMNLSLYEYIQSDQYWQEFVTISIPSSIVFIALSFWLGAWMYN
HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHEECCHHHHHHHHHHHHHHHHHC
RAPQENNGRFFMFNNWLWLVHIIIVGCIAMFTGIVFTTFTYEANSVLYMIGFLIGAFLAH
CCCCCCCCEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHEECCCHHHHHHHHHHHHHHHH
LLAKRLLYRFNLRLKS
HHHHHHHHHHCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 9387221; 9384377 [H]