| Definition | Exiguobacterium sp. AT1b, complete genome. |
|---|---|
| Accession | NC_012673 |
| Length | 2,999,895 |
Click here to switch to the map view.
The map label for this gene is 229918263
Identifier: 229918263
GI number: 229918263
Start: 2507652
End: 2509169
Strand: Direct
Name: 229918263
Synonym: EAT1b_2546
Alternate gene names: NA
Gene position: 2507652-2509169 (Clockwise)
Preceding gene: 229918262
Following gene: 229918264
Centisome position: 83.59
GC content: 28.79
Gene sequence:
>1518_bases ATGAAAACTACGTCAAAAATAAATATCAATAATGCGGTTCTGAACTTAATACAAATTGACAGCTTGGAAGAAATTATTGA AGGCATGGTAAATGAAAAAGCAGATTTTTTTGAAAAAAAATACAAGCAAAAAATAGAAGAAGTTCGGAAAACCCGTTTCG TAAAAAGAGGAAATGTCGGTGCTGAAGTACTTTTCATCTTAAAAAAGAAACATAAAGTAGAGGGTAAGACGGTAGGGATG TACAGAAACATTCTTATTAAAGAATTGTTCATTGAAGGTGAACAGTTTATAAAGTATTTTCAAGAAAAATTTTTAATGGT ATTAAACTATCATTTTAATGTTAGAAGAGTATATGGCATTACGCTAGAAAGTAGCGTTGAAGAAATTAAGTACGAAGCTA TCGAGAAATTTACTGGGATAAAACCTGTACTATTTAAAAATACACTAATTGGAAGTATCGACCTAAACAATAATGACTAT ATTGCAATTTATAATTCTGAAAATGAAGTGAAGATTGTAGAAAAGTTAGGTATTACTTCTGTACACAACAAAGGTAGTGA AAAAGCTGTATTTGTTCAGTACGTCATTGATACTAAAAATGACTTTTTTGAAATATCGTACAATGATTCAGTTATATCTG ATTTCTGCAAACAAGAAAAACATGAAAAGATTATTTCTATTCAATCAAATGATGAAGTATCAATAGAAAAGAAATTTGCA ACTGAGGCAACTGCTCTAATGAATCTGTACAACCGGGTTAAAAATATAATGAAAGATGTTGTTTTAATCCATTCGATATC GAAGGGTTTGTCGTCATCACAAGTAAATCAGATGGTATCATCAATCAAAGAAAATGAAAATGTATCGGATAATGATATAG AAATCATAGCTAATTCCGAGCAAGAAGCTTTCAATAAATCCCCTTTTGAAGCTGCGATGTATCAATACTTTAAAGAAGAC CGCGAAAAATTACTTAAACAAGTATTAGAAGAAGAAACGTTAAATGACAACGAAAAATTCAAAGAAATATTAGCAAAGGA TTTTCCCGAGATTGATTCTTCCAACTTAATAACTAGCGTCAAATTTTTAAAGAATATGATTGCTTTTTCTAAATTAAAAC AAAACAAACACGTTGTTAATAACTTTGAAGATTTCATTTTTTATTTTACCGTTAGAGATTTCGCGGTCACAAAATCAACA ACAAAAAATAATGAACGTAAACCAGTTTACACATCAGATTTCTACTGGCATCTTCAAGAGGTAATTGACTCAATAAAATT ATTAACAGAATTAGGTCTAAGAAAATCCGTTGAAATTTATGATAAGAAAATCTCACAAGAAGTTAAAATTTCGCATTATA ATGATCACCTTAATTTTGTATATTTTCAATTTGCTAAAAAGAATAGTACAGCATCTAAAGAAAAAAATATTCTTAAACTG GCAGAAAGCAGGTTGTTAATTCATGAACTTATTAAAACTAAATTTAGAGAAATTGTATCTAGAGAATCCGGAATTTGA
Upstream 100 bases:
>100_bases AATTGTCTTACGATTCTTCAAAATTAAATTATTGAAAAAGGATAATTCTTTACATAAATAGTAACATAAAACTATGCGTT GTTATGTGGAGGTTGAGGAA
Downstream 100 bases:
>100_bases AAAATTTTTCCCTTTCAATGAATATTACGAAAAAATTGAAGTTTTTATGTTTGCAGAAATAGCTGCTGGACATGATTTTT TAAATCCATACAAATTTGCA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 505; Mature: 505
Protein sequence:
>505_residues MKTTSKININNAVLNLIQIDSLEEIIEGMVNEKADFFEKKYKQKIEEVRKTRFVKRGNVGAEVLFILKKKHKVEGKTVGM YRNILIKELFIEGEQFIKYFQEKFLMVLNYHFNVRRVYGITLESSVEEIKYEAIEKFTGIKPVLFKNTLIGSIDLNNNDY IAIYNSENEVKIVEKLGITSVHNKGSEKAVFVQYVIDTKNDFFEISYNDSVISDFCKQEKHEKIISIQSNDEVSIEKKFA TEATALMNLYNRVKNIMKDVVLIHSISKGLSSSQVNQMVSSIKENENVSDNDIEIIANSEQEAFNKSPFEAAMYQYFKED REKLLKQVLEEETLNDNEKFKEILAKDFPEIDSSNLITSVKFLKNMIAFSKLKQNKHVVNNFEDFIFYFTVRDFAVTKST TKNNERKPVYTSDFYWHLQEVIDSIKLLTELGLRKSVEIYDKKISQEVKISHYNDHLNFVYFQFAKKNSTASKEKNILKL AESRLLIHELIKTKFREIVSRESGI
Sequences:
>Translated_505_residues MKTTSKININNAVLNLIQIDSLEEIIEGMVNEKADFFEKKYKQKIEEVRKTRFVKRGNVGAEVLFILKKKHKVEGKTVGM YRNILIKELFIEGEQFIKYFQEKFLMVLNYHFNVRRVYGITLESSVEEIKYEAIEKFTGIKPVLFKNTLIGSIDLNNNDY IAIYNSENEVKIVEKLGITSVHNKGSEKAVFVQYVIDTKNDFFEISYNDSVISDFCKQEKHEKIISIQSNDEVSIEKKFA TEATALMNLYNRVKNIMKDVVLIHSISKGLSSSQVNQMVSSIKENENVSDNDIEIIANSEQEAFNKSPFEAAMYQYFKED REKLLKQVLEEETLNDNEKFKEILAKDFPEIDSSNLITSVKFLKNMIAFSKLKQNKHVVNNFEDFIFYFTVRDFAVTKST TKNNERKPVYTSDFYWHLQEVIDSIKLLTELGLRKSVEIYDKKISQEVKISHYNDHLNFVYFQFAKKNSTASKEKNILKL AESRLLIHELIKTKFREIVSRESGI >Mature_505_residues MKTTSKININNAVLNLIQIDSLEEIIEGMVNEKADFFEKKYKQKIEEVRKTRFVKRGNVGAEVLFILKKKHKVEGKTVGM YRNILIKELFIEGEQFIKYFQEKFLMVLNYHFNVRRVYGITLESSVEEIKYEAIEKFTGIKPVLFKNTLIGSIDLNNNDY IAIYNSENEVKIVEKLGITSVHNKGSEKAVFVQYVIDTKNDFFEISYNDSVISDFCKQEKHEKIISIQSNDEVSIEKKFA TEATALMNLYNRVKNIMKDVVLIHSISKGLSSSQVNQMVSSIKENENVSDNDIEIIANSEQEAFNKSPFEAAMYQYFKED REKLLKQVLEEETLNDNEKFKEILAKDFPEIDSSNLITSVKFLKNMIAFSKLKQNKHVVNNFEDFIFYFTVRDFAVTKST TKNNERKPVYTSDFYWHLQEVIDSIKLLTELGLRKSVEIYDKKISQEVKISHYNDHLNFVYFQFAKKNSTASKEKNILKL AESRLLIHELIKTKFREIVSRESGI
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 58935; Mature: 58935
Theoretical pI: Translated: 8.28; Mature: 8.28
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.2 %Cys (Translated Protein) 1.8 %Met (Translated Protein) 2.0 %Cys+Met (Translated Protein) 0.2 %Cys (Mature Protein) 1.8 %Met (Mature Protein) 2.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKTTSKININNAVLNLIQIDSLEEIIEGMVNEKADFFEKKYKQKIEEVRKTRFVKRGNVG CCCCCEEECHHHHHHHHHHCCHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHCCCCC AEVLFILKKKHKVEGKTVGMYRNILIKELFIEGEQFIKYFQEKFLMVLNYHFNVRRVYGI HHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEE TLESSVEEIKYEAIEKFTGIKPVLFKNTLIGSIDLNNNDYIAIYNSENEVKIVEKLGITS EHHHHHHHHHHHHHHHHCCCCCEEECCCEEEEEEECCCCEEEEECCCCCEEHHHHHCCHH VHNKGSEKAVFVQYVIDTKNDFFEISYNDSVISDFCKQEKHEKIISIQSNDEVSIEKKFA HCCCCCCCEEEEEEEEECCCCEEEEECCCHHHHHHHHHHHHCCEEEECCCCCCCHHHHHH TEATALMNLYNRVKNIMKDVVLIHSISKGLSSSQVNQMVSSIKENENVSDNDIEIIANSE HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCCCCCCEEEEECCC QEAFNKSPFEAAMYQYFKEDREKLLKQVLEEETLNDNEKFKEILAKDFPEIDSSNLITSV HHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCCCCCCHHHHHH KFLKNMIAFSKLKQNKHVVNNFEDFIFYFTVRDFAVTKSTTKNNERKPVYTSDFYWHLQE HHHHHHHHHHHHHCCHHHHHCHHHHEEEEEEHHHHEECCCCCCCCCCCEECCHHHHHHHH VIDSIKLLTELGLRKSVEIYDKKISQEVKISHYNDHLNFVYFQFAKKNSTASKEKNILKL HHHHHHHHHHHCCCCHHHHHHHHHCCCEEEEEECCCCEEEEEEEECCCCCCHHHHHHHHH AESRLLIHELIKTKFREIVSRESGI HHHHHHHHHHHHHHHHHHHHHCCCC >Mature Secondary Structure MKTTSKININNAVLNLIQIDSLEEIIEGMVNEKADFFEKKYKQKIEEVRKTRFVKRGNVG CCCCCEEECHHHHHHHHHHCCHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHCCCCC AEVLFILKKKHKVEGKTVGMYRNILIKELFIEGEQFIKYFQEKFLMVLNYHFNVRRVYGI HHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEE TLESSVEEIKYEAIEKFTGIKPVLFKNTLIGSIDLNNNDYIAIYNSENEVKIVEKLGITS EHHHHHHHHHHHHHHHHCCCCCEEECCCEEEEEEECCCCEEEEECCCCCEEHHHHHCCHH VHNKGSEKAVFVQYVIDTKNDFFEISYNDSVISDFCKQEKHEKIISIQSNDEVSIEKKFA HCCCCCCCEEEEEEEEECCCCEEEEECCCHHHHHHHHHHHHCCEEEECCCCCCCHHHHHH TEATALMNLYNRVKNIMKDVVLIHSISKGLSSSQVNQMVSSIKENENVSDNDIEIIANSE HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCCCCCCEEEEECCC QEAFNKSPFEAAMYQYFKEDREKLLKQVLEEETLNDNEKFKEILAKDFPEIDSSNLITSV HHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCCCCCCHHHHHH KFLKNMIAFSKLKQNKHVVNNFEDFIFYFTVRDFAVTKSTTKNNERKPVYTSDFYWHLQE HHHHHHHHHHHHHCCHHHHHCHHHHEEEEEEHHHHEECCCCCCCCCCCEECCHHHHHHHH VIDSIKLLTELGLRKSVEIYDKKISQEVKISHYNDHLNFVYFQFAKKNSTASKEKNILKL HHHHHHHHHHHCCCCHHHHHHHHHCCCEEEEEECCCCEEEEEEEECCCCCCHHHHHHHHH AESRLLIHELIKTKFREIVSRESGI HHHHHHHHHHHHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA