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The map label for this gene is 229918262

Identifier: 229918262

GI number: 229918262

Start: 2506407

End: 2507501

Strand: Direct

Name: 229918262

Synonym: EAT1b_2545

Alternate gene names: NA

Gene position: 2506407-2507501 (Clockwise)

Preceding gene: 229918261

Following gene: 229918263

Centisome position: 83.55

GC content: 53.15

Gene sequence:

>1095_bases
ATGAAAAAGACGATGTTGCTCTCATTGGTTGGAATGGCGGCTGTCACTGGAACGATTCTGACACAGTACAAACCACTCGG
ACGAAAGCCGAAATCGCTTCAATCTCCGAACCGGATCAATGGAAAGTTCCGTAATCAATATGAGACACCGATGAACTTCT
CTGCGCAAGACATGGTGTCGATGGCGCGCGACTATCGTGATGTGACGTCACTGCGTAAGCCTACCGAACGTCTTCCGATC
GTGCCAATCGATTTTGAGGAGAAGACGGGCTCGAGCTTCACAAGAATCTATTGGCTCGGTCATTCGGCGCTCATGGTACA
AATGGACGGGAAGACGATGCTCGTCGATCCGATGTTTGGACGTAGCCCATCCCCACTCCCGTTCGCTAAAAACGAACGCT
TCAGTGAAGACTTGCCGTTCGAACTCGAGGACTTGCCCGAAATCGATGTCGTCTTATTGACGCATGACCATTACGACCAT
CTCGATTATGGAACGATTCTTGCCATCAAAGACAAGGTCGCCATGTTCATCGTACCGCTCGGGGTAGGGAGTCATTTGAA
ACGATGGGGTGTCGGGGCAGAGCGAATCGTGGAGAGAGATTGGAACGAGTCGTATACATTCGGGAATTGGACGTTCGTCT
GTACGCCGGCACGTCACTTCTCCGGTCGTTCGCTGACGGACCGCAACAGCACGTTATGGGCGTCATGGGTCGTCCTCGGC
GAGACAGACCGTCTCTTCTTCAGTGGGGATAGTGGCTACGCGCCGCATTTCAAGATGATTGGCGAACAGTACGGACCGTT
TGATTTCGCCGCACTTGAATGCGGGCAATATGACGTGCGCTGGCCAGACGTCCATATGCAGCCGGAAGAGACAGCGCAAG
CGTTTCGCGATTTAAGCGCCGATCAAATGATGCCGATCCATTGGGGGGCGTTCACGCTGTCGTTCCACGACTGGTTCGAT
CCGGCGGAACAGATGTCATCTCTTTTACCAAAAGAAGTCGTCCTCACTCCAAAAATCGGAGAGCGGATCACGCTCGACGG
TCGGAATGATACGACGACGTGGTGGCGAGAGCTCGAAGACGCAAACAAGCGATGA

Upstream 100 bases:

>100_bases
CATTTTTTTGAAAGATAGGCGAATCGACATACTTTCTCGTATAGAAACGGCGAAGGCACGCTATAATCAATTCAACGAAC
TATTAGAAAAGAGGACCTAC

Downstream 100 bases:

>100_bases
CCTCGGTCACCGCTTGTTTTTTGTTACTAAATTAAGTTGAAATTGTCGAAAATTGTCTTACGATTCTTCAAAATTAAATT
ATTGAAAAAGGATAATTCTT

Product: outer membrane protein RomA

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 364; Mature: 364

Protein sequence:

>364_residues
MKKTMLLSLVGMAAVTGTILTQYKPLGRKPKSLQSPNRINGKFRNQYETPMNFSAQDMVSMARDYRDVTSLRKPTERLPI
VPIDFEEKTGSSFTRIYWLGHSALMVQMDGKTMLVDPMFGRSPSPLPFAKNERFSEDLPFELEDLPEIDVVLLTHDHYDH
LDYGTILAIKDKVAMFIVPLGVGSHLKRWGVGAERIVERDWNESYTFGNWTFVCTPARHFSGRSLTDRNSTLWASWVVLG
ETDRLFFSGDSGYAPHFKMIGEQYGPFDFAALECGQYDVRWPDVHMQPEETAQAFRDLSADQMMPIHWGAFTLSFHDWFD
PAEQMSSLLPKEVVLTPKIGERITLDGRNDTTTWWRELEDANKR

Sequences:

>Translated_364_residues
MKKTMLLSLVGMAAVTGTILTQYKPLGRKPKSLQSPNRINGKFRNQYETPMNFSAQDMVSMARDYRDVTSLRKPTERLPI
VPIDFEEKTGSSFTRIYWLGHSALMVQMDGKTMLVDPMFGRSPSPLPFAKNERFSEDLPFELEDLPEIDVVLLTHDHYDH
LDYGTILAIKDKVAMFIVPLGVGSHLKRWGVGAERIVERDWNESYTFGNWTFVCTPARHFSGRSLTDRNSTLWASWVVLG
ETDRLFFSGDSGYAPHFKMIGEQYGPFDFAALECGQYDVRWPDVHMQPEETAQAFRDLSADQMMPIHWGAFTLSFHDWFD
PAEQMSSLLPKEVVLTPKIGERITLDGRNDTTTWWRELEDANKR
>Mature_364_residues
MKKTMLLSLVGMAAVTGTILTQYKPLGRKPKSLQSPNRINGKFRNQYETPMNFSAQDMVSMARDYRDVTSLRKPTERLPI
VPIDFEEKTGSSFTRIYWLGHSALMVQMDGKTMLVDPMFGRSPSPLPFAKNERFSEDLPFELEDLPEIDVVLLTHDHYDH
LDYGTILAIKDKVAMFIVPLGVGSHLKRWGVGAERIVERDWNESYTFGNWTFVCTPARHFSGRSLTDRNSTLWASWVVLG
ETDRLFFSGDSGYAPHFKMIGEQYGPFDFAALECGQYDVRWPDVHMQPEETAQAFRDLSADQMMPIHWGAFTLSFHDWFD
PAEQMSSLLPKEVVLTPKIGERITLDGRNDTTTWWRELEDANKR

Specific function: Unknown

COG id: COG2220

COG function: function code R; Predicted Zn-dependent hydrolases of the beta-lactamase fold

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: To K.pneumoniae romA [H]

Homologues:

Organism=Homo sapiens, GI170932483, Length=309, Percent_Identity=35.2750809061489, Blast_Score=197, Evalue=2e-50,
Organism=Homo sapiens, GI170932481, Length=309, Percent_Identity=35.2750809061489, Blast_Score=197, Evalue=2e-50,
Organism=Caenorhabditis elegans, GI17543102, Length=246, Percent_Identity=34.9593495934959, Blast_Score=165, Evalue=4e-41,
Organism=Caenorhabditis elegans, GI17543100, Length=246, Percent_Identity=34.9593495934959, Blast_Score=164, Evalue=5e-41,
Organism=Caenorhabditis elegans, GI25148824, Length=246, Percent_Identity=34.9593495934959, Blast_Score=164, Evalue=6e-41,
Organism=Caenorhabditis elegans, GI17543104, Length=263, Percent_Identity=34.6007604562738, Blast_Score=163, Evalue=1e-40,
Organism=Saccharomyces cerevisiae, GI6325154, Length=287, Percent_Identity=30.3135888501742, Blast_Score=125, Evalue=2e-29,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 41778; Mature: 41778

Theoretical pI: Translated: 5.82; Mature: 5.82

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
4.4 %Met     (Translated Protein)
4.9 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
4.4 %Met     (Mature Protein)
4.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKKTMLLSLVGMAAVTGTILTQYKPLGRKPKSLQSPNRINGKFRNQYETPMNFSAQDMVS
CCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHH
MARDYRDVTSLRKPTERLPIVPIDFEEKTGSSFTRIYWLGHSALMVQMDGKTMLVDPMFG
HHHHHHHHHHHCCHHHHCCEEEECCCCCCCCCEEEEEEECCEEEEEEECCCEEEECCCCC
RSPSPLPFAKNERFSEDLPFELEDLPEIDVVLLTHDHYDHLDYGTILAIKDKVAMFIVPL
CCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEEECCCCCCCCCCEEEEEECCEEEEEEEE
GVGSHLKRWGVGAERIVERDWNESYTFGNWTFVCTPARHFSGRSLTDRNSTLWASWVVLG
CCCHHHHHHCCCHHHHHHCCCCCCEECCCEEEEECCHHHCCCCCCCCCCCEEEEEEEEEE
ETDRLFFSGDSGYAPHFKMIGEQYGPFDFAALECGQYDVRWPDVHMQPEETAQAFRDLSA
CCCEEEEECCCCCCCHHHHHHHHCCCCCEEEEECCCCCCCCCCCCCCHHHHHHHHHCCCC
DQMMPIHWGAFTLSFHDWFDPAEQMSSLLPKEVVLTPKIGERITLDGRNDTTTWWRELED
CCCCEEEECEEEEEHHHHCCHHHHHHHHCCCEEEECCCCCCEEEECCCCCCHHHHHHHHH
ANKR
CCCC
>Mature Secondary Structure
MKKTMLLSLVGMAAVTGTILTQYKPLGRKPKSLQSPNRINGKFRNQYETPMNFSAQDMVS
CCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHH
MARDYRDVTSLRKPTERLPIVPIDFEEKTGSSFTRIYWLGHSALMVQMDGKTMLVDPMFG
HHHHHHHHHHHCCHHHHCCEEEECCCCCCCCCEEEEEEECCEEEEEEECCCEEEECCCCC
RSPSPLPFAKNERFSEDLPFELEDLPEIDVVLLTHDHYDHLDYGTILAIKDKVAMFIVPL
CCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEEECCCCCCCCCCEEEEEECCEEEEEEEE
GVGSHLKRWGVGAERIVERDWNESYTFGNWTFVCTPARHFSGRSLTDRNSTLWASWVVLG
CCCHHHHHHCCCHHHHHHCCCCCCEECCCEEEEECCHHHCCCCCCCCCCCEEEEEEEEEE
ETDRLFFSGDSGYAPHFKMIGEQYGPFDFAALECGQYDVRWPDVHMQPEETAQAFRDLSA
CCCEEEEECCCCCCCHHHHHHHHCCCCCEEEEECCCCCCCCCCCCCCHHHHHHHHHCCCC
DQMMPIHWGAFTLSFHDWFDPAEQMSSLLPKEVVLTPKIGERITLDGRNDTTTWWRELED
CCCCEEEECEEEEEHHHHCCHHHHHHHHCCCEEEECCCCCCEEEECCCCCCHHHHHHHHH
ANKR
CCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 9634230; 12218036 [H]