| Definition | Exiguobacterium sp. AT1b, complete genome. |
|---|---|
| Accession | NC_012673 |
| Length | 2,999,895 |
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The map label for this gene is yqeH [H]
Identifier: 229918235
GI number: 229918235
Start: 2480561
End: 2481673
Strand: Direct
Name: yqeH [H]
Synonym: EAT1b_2516
Alternate gene names: 229918235
Gene position: 2480561-2481673 (Clockwise)
Preceding gene: 229918234
Following gene: 229918236
Centisome position: 82.69
GC content: 49.24
Gene sequence:
>1113_bases ATGGAAGAAACAAAACGATATTGCGCTGGGTGCGGCGTGGCCATCCAAACGGAAGACCCGAACGGGGTCGGCTATGCACC GAAATCGGCACTTGACCGTGAGATTGTCATTTGCCAACGTTGCTTCAAATTGAAGCACTATAACCAAGTTCAAGATGTGG AGTTATCAGATGATGATTTCTTGCGCATCTTGAATGGTATCAGTTCAAAAGAAGCACTCGTCATCAAAATCGTCGACATT TTCGACTTCAATGGCAGTTGGCTTCCGGGTCTTCAGCGCTCAGTCGGGTCGAACCCGGTACTGTTAGTCGGAAACAAGGT CGACTTGTTACCGAAGTCGGTCAACCCGAACCGGATGGCGAACTGGATGAAGGCAGAGGCAAAAGAACTCGGCTTGAACC CGATCGACGTTCATTTGATCAGTGCGAAAAAAGGCCACGGCATCGATGAACTTGCTGAAAAGATTGAGTATTACCGTAAA GGCAAAGACGTCTTCGTCGTCGGTTGTACGAATGTCGGGAAGTCGACACTCATCAACCAGGTGATTAAACGTTTCGGTGA AGAGGATGAAGCCATCATCACCGTCAGTCATTTCCCGGGAACGACGCTTGACTTGATCGACATTCCGCTCGACGATGATG CGAACTTGTACGACACGCCAGGAATCATCAACCGTCATCAAATGGCACACTATGTCGATGCGAAAGATTTGAAGACGATC ACACCGAAGAAAGAAATCAAGCCGCACGTGTTCCAATTGAATCCGCAACAGACACTCTATTTTGGCGGATTGGCACGTTT AGATTATCTTGAAGGGAATAAGCGATCGTTCGTCATTTACATGTCGAATGAATTGAAAGCACACCGTACGAAACTCGAAC GTGCCGATGAGCTCTATGACCAACATATTGGGAAGATGCTCAACCCACCGAATGAGAAGACACTCGAAATCTTGCCACCA CTCGTCCGTCATGAGTTCAGTTTACGGGACGGCGTGAAAACGGATATCGTGTTCAGCGGTCTCGGTTGGGTCGCGATTCA CGGAAAAGGTGGCCGCATCGCAGCATGGGCTCCAAAAGGCGTCGCAGTCACACTTCGCGAGGCGCTCGTATGA
Upstream 100 bases:
>100_bases ATGTACGGCGAGCAAGGCGTCGGAATTAACGCTTCAGGAGTAGCAGCGAGGTGCTACGGTGAATGAAGAAGGGGAAACCT GAACGGCAGTAAGTATAACT
Downstream 100 bases:
>100_bases ATCTGGCCGTCATCGGTCACCCGATTGCTCATTCGCTCTCTCCCCAACTGCACGAGCAGTGGTTGAGGGCGTCTGGGCTT TTCGGGCGTTATGAGGCCAT
Product: GTP-binding protein YqeH
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 370; Mature: 370
Protein sequence:
>370_residues MEETKRYCAGCGVAIQTEDPNGVGYAPKSALDREIVICQRCFKLKHYNQVQDVELSDDDFLRILNGISSKEALVIKIVDI FDFNGSWLPGLQRSVGSNPVLLVGNKVDLLPKSVNPNRMANWMKAEAKELGLNPIDVHLISAKKGHGIDELAEKIEYYRK GKDVFVVGCTNVGKSTLINQVIKRFGEEDEAIITVSHFPGTTLDLIDIPLDDDANLYDTPGIINRHQMAHYVDAKDLKTI TPKKEIKPHVFQLNPQQTLYFGGLARLDYLEGNKRSFVIYMSNELKAHRTKLERADELYDQHIGKMLNPPNEKTLEILPP LVRHEFSLRDGVKTDIVFSGLGWVAIHGKGGRIAAWAPKGVAVTLREALV
Sequences:
>Translated_370_residues MEETKRYCAGCGVAIQTEDPNGVGYAPKSALDREIVICQRCFKLKHYNQVQDVELSDDDFLRILNGISSKEALVIKIVDI FDFNGSWLPGLQRSVGSNPVLLVGNKVDLLPKSVNPNRMANWMKAEAKELGLNPIDVHLISAKKGHGIDELAEKIEYYRK GKDVFVVGCTNVGKSTLINQVIKRFGEEDEAIITVSHFPGTTLDLIDIPLDDDANLYDTPGIINRHQMAHYVDAKDLKTI TPKKEIKPHVFQLNPQQTLYFGGLARLDYLEGNKRSFVIYMSNELKAHRTKLERADELYDQHIGKMLNPPNEKTLEILPP LVRHEFSLRDGVKTDIVFSGLGWVAIHGKGGRIAAWAPKGVAVTLREALV >Mature_370_residues MEETKRYCAGCGVAIQTEDPNGVGYAPKSALDREIVICQRCFKLKHYNQVQDVELSDDDFLRILNGISSKEALVIKIVDI FDFNGSWLPGLQRSVGSNPVLLVGNKVDLLPKSVNPNRMANWMKAEAKELGLNPIDVHLISAKKGHGIDELAEKIEYYRK GKDVFVVGCTNVGKSTLINQVIKRFGEEDEAIITVSHFPGTTLDLIDIPLDDDANLYDTPGIINRHQMAHYVDAKDLKTI TPKKEIKPHVFQLNPQQTLYFGGLARLDYLEGNKRSFVIYMSNELKAHRTKLERADELYDQHIGKMLNPPNEKTLEILPP LVRHEFSLRDGVKTDIVFSGLGWVAIHGKGGRIAAWAPKGVAVTLREALV
Specific function: Binds GTP and GDP [H]
COG id: COG1161
COG function: function code R; Predicted GTPases
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 G (guanine nucleotide-binding) domain [H]
Homologues:
Organism=Homo sapiens, GI14150078, Length=260, Percent_Identity=29.2307692307692, Blast_Score=97, Evalue=3e-20, Organism=Caenorhabditis elegans, GI17537249, Length=233, Percent_Identity=33.9055793991416, Blast_Score=102, Evalue=4e-22, Organism=Drosophila melanogaster, GI28573544, Length=228, Percent_Identity=36.4035087719298, Blast_Score=127, Evalue=1e-29,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR019988 - InterPro: IPR002917 [H]
Pfam domain/function: PF01926 MMR_HSR1 [H]
EC number: NA
Molecular weight: Translated: 41379; Mature: 41379
Theoretical pI: Translated: 7.10; Mature: 7.10
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.4 %Cys (Translated Protein) 1.6 %Met (Translated Protein) 3.0 %Cys+Met (Translated Protein) 1.4 %Cys (Mature Protein) 1.6 %Met (Mature Protein) 3.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MEETKRYCAGCGVAIQTEDPNGVGYAPKSALDREIVICQRCFKLKHYNQVQDVELSDDDF CCHHHHHHHHCCEEEEECCCCCCCCCCHHHCCHHHHHHHHHHHHHHCCCCCCCCCCCHHH LRILNGISSKEALVIKIVDIFDFNGSWLPGLQRSVGSNPVLLVGNKVDLLPKSVNPNRMA HHHHHCCCCCCEEEEEEEEEEECCCCCCCCHHHHCCCCCEEEECCCEEECCCCCCHHHHH NWMKAEAKELGLNPIDVHLISAKKGHGIDELAEKIEYYRKGKDVFVVGCTNVGKSTLINQ HHHHHHHHHHCCCEEEEEEEECCCCCCHHHHHHHHHHHHCCCCEEEEECCCCCHHHHHHH VIKRFGEEDEAIITVSHFPGTTLDLIDIPLDDDANLYDTPGIINRHQMAHYVDAKDLKTI HHHHHCCCCCEEEEEECCCCCEEEEEEECCCCCCCCCCCCCCCCHHHHHHHCCHHHCCCC TPKKEIKPHVFQLNPQQTLYFGGLARLDYLEGNKRSFVIYMSNELKAHRTKLERADELYD CCHHHCCCCEEEECCCCEEEECCEEEEEEECCCCEEEEEEECCCHHHHHHHHHHHHHHHH QHIGKMLNPPNEKTLEILPPLVRHEFSLRDGVKTDIVFSGLGWVAIHGKGGRIAAWAPKG HHHHHHCCCCCCCHHHHCCHHHHHCCHHCCCCCEEEEEECCCEEEEECCCCEEEEECCCC VAVTLREALV EEEEHHHHCC >Mature Secondary Structure MEETKRYCAGCGVAIQTEDPNGVGYAPKSALDREIVICQRCFKLKHYNQVQDVELSDDDF CCHHHHHHHHCCEEEEECCCCCCCCCCHHHCCHHHHHHHHHHHHHHCCCCCCCCCCCHHH LRILNGISSKEALVIKIVDIFDFNGSWLPGLQRSVGSNPVLLVGNKVDLLPKSVNPNRMA HHHHHCCCCCCEEEEEEEEEEECCCCCCCCHHHHCCCCCEEEECCCEEECCCCCCHHHHH NWMKAEAKELGLNPIDVHLISAKKGHGIDELAEKIEYYRKGKDVFVVGCTNVGKSTLINQ HHHHHHHHHHCCCEEEEEEEECCCCCCHHHHHHHHHHHHCCCCEEEEECCCCCHHHHHHH VIKRFGEEDEAIITVSHFPGTTLDLIDIPLDDDANLYDTPGIINRHQMAHYVDAKDLKTI HHHHHCCCCCEEEEEECCCCCEEEEEEECCCCCCCCCCCCCCCCHHHHHHHCCHHHCCCC TPKKEIKPHVFQLNPQQTLYFGGLARLDYLEGNKRSFVIYMSNELKAHRTKLERADELYD CCHHHCCCCEEEECCCCEEEECCEEEEEEECCCCEEEEEEECCCHHHHHHHHHHHHHHHH QHIGKMLNPPNEKTLEILPPLVRHEFSLRDGVKTDIVFSGLGWVAIHGKGGRIAAWAPKG HHHHHHCCCCCCCHHHHCCHHHHHCCHHCCCCCEEEEEECCCEEEEECCCCEEEEECCCC VAVTLREALV EEEEHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 8969508; 9384377 [H]