| Definition | Exiguobacterium sp. AT1b, complete genome. |
|---|---|
| Accession | NC_012673 |
| Length | 2,999,895 |
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The map label for this gene is 229918188
Identifier: 229918188
GI number: 229918188
Start: 2423437
End: 2423910
Strand: Direct
Name: 229918188
Synonym: EAT1b_2468
Alternate gene names: NA
Gene position: 2423437-2423910 (Clockwise)
Preceding gene: 229918187
Following gene: 229918189
Centisome position: 80.78
GC content: 45.78
Gene sequence:
>474_bases ATGTATCGAAGGCTCAGTGAATGGATGGACCCGAGTCGGATGTGGGTGACGGAACAATCAACGTTTGAACGTGCGATGAT GGCGGTAGGTCTTGAATTGGAACGAAAAGGCGTGGTCAGTTCTTCATTTACGCGAGTTGTTCTCGATCAAGAATCGATTA TTCCTTCCGGGGTAAGTGATGTCGCTGTGCCAGTTGCGGTCATTGATGTTCCCATCTCTATAGCGAAACGAGACGGTATT TCCCTGCTTCACCTGTTGAATCCGTGTGAAGTAAAAACCATCACGGGAGAAACGATTCAAGCGAAAGCGATTTTATTCAT TACGGCTACGAATGAATCGAAAAAACAGGGCTATCATAAACTGATTGATGATTTGCTCATGGATGATGAATCCCTTCAAG CGCTCGTCCACGTGAAAAGTCGCGCCGGATTGTTCCACTTGCAGACGAACTTTTTGGAAGCGTTTTCTTATTGA
Upstream 100 bases:
>100_bases GTGAACGTTGATCATACGGATTGCGCCTCGATGGGAGAAGGCGTATCATAATTTGTGCAAGCGCTTTCGTAGCGGCTGAT TAAAAATAGGAGGAATCACT
Downstream 100 bases:
>100_bases AACATTTCATGTACAATAGAAGTAATTGAAAAGAGCGCGGACGACGTGCTCTTTTTTATGGCTCAAAAGTGAATCATCAT TCATTTAAAGGGGGATTACC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 157; Mature: 157
Protein sequence:
>157_residues MYRRLSEWMDPSRMWVTEQSTFERAMMAVGLELERKGVVSSSFTRVVLDQESIIPSGVSDVAVPVAVIDVPISIAKRDGI SLLHLLNPCEVKTITGETIQAKAILFITATNESKKQGYHKLIDDLLMDDESLQALVHVKSRAGLFHLQTNFLEAFSY
Sequences:
>Translated_157_residues MYRRLSEWMDPSRMWVTEQSTFERAMMAVGLELERKGVVSSSFTRVVLDQESIIPSGVSDVAVPVAVIDVPISIAKRDGI SLLHLLNPCEVKTITGETIQAKAILFITATNESKKQGYHKLIDDLLMDDESLQALVHVKSRAGLFHLQTNFLEAFSY >Mature_157_residues MYRRLSEWMDPSRMWVTEQSTFERAMMAVGLELERKGVVSSSFTRVVLDQESIIPSGVSDVAVPVAVIDVPISIAKRDGI SLLHLLNPCEVKTITGETIQAKAILFITATNESKKQGYHKLIDDLLMDDESLQALVHVKSRAGLFHLQTNFLEAFSY
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 17583; Mature: 17583
Theoretical pI: Translated: 5.63; Mature: 5.63
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 3.8 %Met (Translated Protein) 4.5 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 3.8 %Met (Mature Protein) 4.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MYRRLSEWMDPSRMWVTEQSTFERAMMAVGLELERKGVVSSSFTRVVLDQESIIPSGVSD CCCCHHHHCCCCCEEEECHHHHHHHHHHHCCHHHCCCCCCCCCEEEEECCCCCCCCCCCH VAVPVAVIDVPISIAKRDGISLLHLLNPCEVKTITGETIQAKAILFITATNESKKQGYHK HHHEEEEEECCCEEECCCCCEEEECCCCCEEEEECCCEEEEEEEEEEEECCCHHHHHHHH LIDDLLMDDESLQALVHVKSRAGLFHLQTNFLEAFSY HHHHHHCCCHHHHHHHHHHHHCCEEEEHHHHHHHHCC >Mature Secondary Structure MYRRLSEWMDPSRMWVTEQSTFERAMMAVGLELERKGVVSSSFTRVVLDQESIIPSGVSD CCCCHHHHCCCCCEEEECHHHHHHHHHHHCCHHHCCCCCCCCCEEEEECCCCCCCCCCCH VAVPVAVIDVPISIAKRDGISLLHLLNPCEVKTITGETIQAKAILFITATNESKKQGYHK HHHEEEEEECCCEEECCCCCEEEECCCCCEEEEECCCEEEEEEEEEEEECCCHHHHHHHH LIDDLLMDDESLQALVHVKSRAGLFHLQTNFLEAFSY HHHHHHCCCHHHHHHHHHHHHCCEEEEHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA