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The map label for this gene is yfbS [H]

Identifier: 229918165

GI number: 229918165

Start: 2402930

End: 2404705

Strand: Direct

Name: yfbS [H]

Synonym: EAT1b_2445

Alternate gene names: 229918165

Gene position: 2402930-2404705 (Clockwise)

Preceding gene: 229918164

Following gene: 229918166

Centisome position: 80.1

GC content: 50.56

Gene sequence:

>1776_bases
ATGATCACGGTGATAATCCTTTTAGGGATGATTTTCTTTTTTATAGCAGGATGGTTACGGGCGGACGTGGTGGCCTTGAT
TGGACTCGTTTGCCTCGTGCTCACTCAGCAATTGACGCCAGGTGAGGCGATGGCTGGTTTCTCCAATCCGGTCGTCTTGA
TGATTGCCGGACTGTTCGTGGTCGGAGCGGGATTGTTTCATTCTGGTCTGGCGGAACGGTTGGCTTCTTTACTTATTCCA
TACGCGGGCGGGAGTGCGACGCGATTATTCTACCTGTTTATGTTGACGGTGACGCTCTTGTCGAGTGTCATGTCCAATAC
GGGCACCGTCGCCTTGCTCATTCCCGTTGTGATGGTAATGGCACGAAAAATCCAACAGTCTACAGATTCTTATCTCATGC
CACTCGCCTTTTTTTCTAGCATCGGCGGAACGATGACACTGATTGGGACTCCTCCCAATCTCATTGCGGCAGAAGCACTC
CGTGGCATCGTAGATGAACCGCTCGGATTCTTTTCATTGTTTCCAATTGGTCTGGTCGTGATGGTGATCGGACTGATTTA
TTTCCGGCTAATCGGGAACCGCTTACTCGATCAAGGTGGGGCGAAACAGTGGTCGAAAACGGAGGTGAGTGAGCCATTGC
GTCCAAACGTCTATGTGATGTCGATTGCCAAGAGTCATCCGTTAATTGGGAAACATTTACGTGACCTTCCATGGTCTCAT
GAAGGGGTTATAGTCTTGAAGGAACGAGTTCATGGACGACACCATCATGAGACGGCTCATGCGGACACCGTACTACGTCC
GGGGGAATTACTTGTCAGCGGCGAGGAACGGCACGTTCGGAACTTTTCCGAAAAAGAACAGATTCCATTTGAACCGATTG
AGGCCACCCGTGTAGATGATCAAACGGGTGGGGTTCTCCTGTTCACGGTCCCAGGGGTGAGTCGACTAATCGGGAAGCGG
ATCAGTGAGAGTCAGTTACGTAATCAGTTTCATGTCAATATCTTAAAAGTCATCCGACCACAAGAAGAGATTGCACACGT
GCGATTGAAAGACACGCCATTGAAACAAGGGGACATGTTGATGGTACAAGGGACATGGGATGATTTAGAGCGGATGGAGC
GAGAGACACATGACCTGTTATCGAATGAACGGGTGACCGAGGTAGCCAATCGAGTCGTATCCGGGCGTCATCAGCTCGCA
GCAGGCATCATCATGCTCACGTTGTTGCTCCTGTTCATGTTCGAATGGGTCGACCCGACCGTTGCCGTATGGCTGGCTGC
GCTAGCGATGGTGTTGAGTGGAGCTGTCCGACAGATGGACGTCGCCTATCAATCCATTCAATGGTCCTCGCTCGTCTTGA
TTGCGGCCATGATCCCGGTAGGTACTGCGCTTGAAAAGGCGGGAATCATGGCATGGGTCGTTGCATGGATTGAAAGGACG
TTTGCCGACTTTGGTCCCACTTGGGTACTCGTCGTCTTATTCGTCTCCACCATGATTCTTAGTCAAATCATCTCGAATAC
AGCGACCGCTATTTTGTTCGTCCCCCTTGCGATTGCACTCGCCGAATCGATGTCTGTCAGTCCGGTTCCATTCGTCGTTG
CGGTCGCCATCTCGGCGTCACTCGCTTTTATGACCCCGTTCGGATCTCCGACAAATGCGATGGTCTTTAGTATCGGCAAC
TATCGATTTATGGATTTTGTCAAAGTCGGTGTGCCGTTGCAACTCATCACGGGAATTATAGGAATTCTGATGATTCTCAT
CCTCTTCCCATTTTGA

Upstream 100 bases:

>100_bases
ATCCGTTTTTTTGTTGATGAGATTGTCACACGCTTGAAGTAAGCGCTTACATAAAGTGGGTTATAATGAAGTTGTGACAA
TAGTGAAAGGGTGAATCAGC

Downstream 100 bases:

>100_bases
ATAGGATTTTTGGAGACAAGTATCGAAAATAGAGGAATCAGCAGATGAAAGGGGGGACGATGATGAAAAAATGGATGATT
GTATTCTTCTGCCTGTTTCT

Product: Citrate transporter

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 591; Mature: 591

Protein sequence:

>591_residues
MITVIILLGMIFFFIAGWLRADVVALIGLVCLVLTQQLTPGEAMAGFSNPVVLMIAGLFVVGAGLFHSGLAERLASLLIP
YAGGSATRLFYLFMLTVTLLSSVMSNTGTVALLIPVVMVMARKIQQSTDSYLMPLAFFSSIGGTMTLIGTPPNLIAAEAL
RGIVDEPLGFFSLFPIGLVVMVIGLIYFRLIGNRLLDQGGAKQWSKTEVSEPLRPNVYVMSIAKSHPLIGKHLRDLPWSH
EGVIVLKERVHGRHHHETAHADTVLRPGELLVSGEERHVRNFSEKEQIPFEPIEATRVDDQTGGVLLFTVPGVSRLIGKR
ISESQLRNQFHVNILKVIRPQEEIAHVRLKDTPLKQGDMLMVQGTWDDLERMERETHDLLSNERVTEVANRVVSGRHQLA
AGIIMLTLLLLFMFEWVDPTVAVWLAALAMVLSGAVRQMDVAYQSIQWSSLVLIAAMIPVGTALEKAGIMAWVVAWIERT
FADFGPTWVLVVLFVSTMILSQIISNTATAILFVPLAIALAESMSVSPVPFVVAVAISASLAFMTPFGSPTNAMVFSIGN
YRFMDFVKVGVPLQLITGIIGILMILILFPF

Sequences:

>Translated_591_residues
MITVIILLGMIFFFIAGWLRADVVALIGLVCLVLTQQLTPGEAMAGFSNPVVLMIAGLFVVGAGLFHSGLAERLASLLIP
YAGGSATRLFYLFMLTVTLLSSVMSNTGTVALLIPVVMVMARKIQQSTDSYLMPLAFFSSIGGTMTLIGTPPNLIAAEAL
RGIVDEPLGFFSLFPIGLVVMVIGLIYFRLIGNRLLDQGGAKQWSKTEVSEPLRPNVYVMSIAKSHPLIGKHLRDLPWSH
EGVIVLKERVHGRHHHETAHADTVLRPGELLVSGEERHVRNFSEKEQIPFEPIEATRVDDQTGGVLLFTVPGVSRLIGKR
ISESQLRNQFHVNILKVIRPQEEIAHVRLKDTPLKQGDMLMVQGTWDDLERMERETHDLLSNERVTEVANRVVSGRHQLA
AGIIMLTLLLLFMFEWVDPTVAVWLAALAMVLSGAVRQMDVAYQSIQWSSLVLIAAMIPVGTALEKAGIMAWVVAWIERT
FADFGPTWVLVVLFVSTMILSQIISNTATAILFVPLAIALAESMSVSPVPFVVAVAISASLAFMTPFGSPTNAMVFSIGN
YRFMDFVKVGVPLQLITGIIGILMILILFPF
>Mature_591_residues
MITVIILLGMIFFFIAGWLRADVVALIGLVCLVLTQQLTPGEAMAGFSNPVVLMIAGLFVVGAGLFHSGLAERLASLLIP
YAGGSATRLFYLFMLTVTLLSSVMSNTGTVALLIPVVMVMARKIQQSTDSYLMPLAFFSSIGGTMTLIGTPPNLIAAEAL
RGIVDEPLGFFSLFPIGLVVMVIGLIYFRLIGNRLLDQGGAKQWSKTEVSEPLRPNVYVMSIAKSHPLIGKHLRDLPWSH
EGVIVLKERVHGRHHHETAHADTVLRPGELLVSGEERHVRNFSEKEQIPFEPIEATRVDDQTGGVLLFTVPGVSRLIGKR
ISESQLRNQFHVNILKVIRPQEEIAHVRLKDTPLKQGDMLMVQGTWDDLERMERETHDLLSNERVTEVANRVVSGRHQLA
AGIIMLTLLLLFMFEWVDPTVAVWLAALAMVLSGAVRQMDVAYQSIQWSSLVLIAAMIPVGTALEKAGIMAWVVAWIERT
FADFGPTWVLVVLFVSTMILSQIISNTATAILFVPLAIALAESMSVSPVPFVVAVAISASLAFMTPFGSPTNAMVFSIGN
YRFMDFVKVGVPLQLITGIIGILMILILFPF

Specific function: Unknown

COG id: COG0471

COG function: function code P; Di- and tricarboxylate transporters

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein (Probable) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 2 RCK C-terminal domains [H]

Homologues:

Organism=Homo sapiens, GI29171306, Length=148, Percent_Identity=27.7027027027027, Blast_Score=70, Evalue=8e-12,
Organism=Homo sapiens, GI19923838, Length=150, Percent_Identity=30.6666666666667, Blast_Score=69, Evalue=1e-11,
Organism=Homo sapiens, GI31795546, Length=144, Percent_Identity=25, Blast_Score=67, Evalue=5e-11,
Organism=Escherichia coli, GI1788629, Length=604, Percent_Identity=34.2715231788079, Blast_Score=292, Evalue=4e-80,
Organism=Caenorhabditis elegans, GI17551790, Length=149, Percent_Identity=26.8456375838926, Blast_Score=69, Evalue=5e-12,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004680
- InterPro:   IPR001898
- InterPro:   IPR006037 [H]

Pfam domain/function: PF03600 CitMHS; PF02080 TrkA_C [H]

EC number: NA

Molecular weight: Translated: 64772; Mature: 64772

Theoretical pI: Translated: 6.90; Mature: 6.90

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.2 %Cys     (Translated Protein)
4.6 %Met     (Translated Protein)
4.7 %Cys+Met (Translated Protein)
0.2 %Cys     (Mature Protein)
4.6 %Met     (Mature Protein)
4.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure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HHHCCCCCCCCCCEEEECCCCHHHHHHHHCCCHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure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HHHCCCCCCCCCCEEEECCCCHHHHHHHHCCCHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 11206551; 11258796 [H]