Definition Exiguobacterium sp. AT1b, complete genome.
Accession NC_012673
Length 2,999,895

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The map label for this gene is yceI [C]

Identifier: 229918132

GI number: 229918132

Start: 2363438

End: 2363971

Strand: Direct

Name: yceI [C]

Synonym: EAT1b_2412

Alternate gene names: 229918132

Gene position: 2363438-2363971 (Clockwise)

Preceding gene: 229918128

Following gene: 229918134

Centisome position: 78.78

GC content: 48.88

Gene sequence:

>534_bases
ATGGCTAAGACATATCAAATTGACCCGGCGCATAGTTCGATCACGTTCACGGTCAAGCACATGATGATTTCCAAGGTGAA
AGGCGAGTTCAAAGAATTTGATATTAAGGCGAACGGTGAGCCGAGCGATTTAGCGAATGCGAGTGTGAAAGTGACGATTC
AGGCAGCATCGATCGACACCAACAACACGGATCGGGATAACCACCTCCGTTCAGGCGATTTCTTCAATGCCGAGGAGCAT
CCGCATCTCGTCTTTCATTCAACTTCTTTCCGTTCAAAAGGAGGCGGAGAATTCGAATTGACAGGGGATTTAACGATTCG
AGGAACAACTCGGGAAGAGACGTTTGAAGTGGAGTATGAGGGAAGCGCAAAAGACCCATGGGGCAATACGAAACACGCCT
TCTCCGGAGAAGGGTCGCTCAACCGTGAGGACTATGGATTAACGTGGAACCAAGCGCTTGAGGCGGGTGGTGTCCTCGTC
GATAAGAAAGTCAAATTCGAGTTCGAGCTCCAATTCACTGAATCGGAAGCATAA

Upstream 100 bases:

>100_bases
GACAATAATTTGTCAATCTTTTGTAAAAACGTTTTGAACTCAAGATTTGTGGAAATGACTAGATTGTACACATTAATTCA
TCCATAAGGAGTGAGTCACG

Downstream 100 bases:

>100_bases
GAAAAGTCGCTCATCTGAGCGACTTTTTATTGTTCGTATACCAATTTTTTCTGAAGGCTGTCTTCACTAAACACCCAACC
TGTAAACGATGACAACACGT

Product: YceI family protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 177; Mature: 176

Protein sequence:

>177_residues
MAKTYQIDPAHSSITFTVKHMMISKVKGEFKEFDIKANGEPSDLANASVKVTIQAASIDTNNTDRDNHLRSGDFFNAEEH
PHLVFHSTSFRSKGGGEFELTGDLTIRGTTREETFEVEYEGSAKDPWGNTKHAFSGEGSLNREDYGLTWNQALEAGGVLV
DKKVKFEFELQFTESEA

Sequences:

>Translated_177_residues
MAKTYQIDPAHSSITFTVKHMMISKVKGEFKEFDIKANGEPSDLANASVKVTIQAASIDTNNTDRDNHLRSGDFFNAEEH
PHLVFHSTSFRSKGGGEFELTGDLTIRGTTREETFEVEYEGSAKDPWGNTKHAFSGEGSLNREDYGLTWNQALEAGGVLV
DKKVKFEFELQFTESEA
>Mature_176_residues
AKTYQIDPAHSSITFTVKHMMISKVKGEFKEFDIKANGEPSDLANASVKVTIQAASIDTNNTDRDNHLRSGDFFNAEEHP
HLVFHSTSFRSKGGGEFELTGDLTIRGTTREETFEVEYEGSAKDPWGNTKHAFSGEGSLNREDYGLTWNQALEAGGVLVD
KKVKFEFELQFTESEA

Specific function: Unknown

COG id: COG2353

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Periplasmic Protein [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0312 family [H]

Homologues:

Organism=Escherichia coli, GI1787295, Length=149, Percent_Identity=38.255033557047, Blast_Score=110, Evalue=4e-26,

Paralogues:

None

Copy number: 40 Molecules/Cell In: Stationary Phase, Rich Media (Based on E. coli). [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR007372 [H]

Pfam domain/function: PF04264 YceI [H]

EC number: NA

Molecular weight: Translated: 19729; Mature: 19598

Theoretical pI: Translated: 4.84; Mature: 4.84

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.7 %Met     (Translated Protein)
1.7 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.1 %Met     (Mature Protein)
1.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAKTYQIDPAHSSITFTVKHMMISKVKGEFKEFDIKANGEPSDLANASVKVTIQAASIDT
CCCEEECCCCCCEEEEEEHHHHHHHHCCCCEEEEEECCCCCCCCCCCEEEEEEEEEEECC
NNTDRDNHLRSGDFFNAEEHPHLVFHSTSFRSKGGGEFELTGDLTIRGTTREETFEVEYE
CCCCCCCCCCCCCCCCCCCCCEEEEEECCCCCCCCCEEEEEEEEEEEECCCCEEEEEEEC
GSAKDPWGNTKHAFSGEGSLNREDYGLTWNQALEAGGVLVDKKVKFEFELQFTESEA
CCCCCCCCCCCCEECCCCCCCCCCCCCCHHHHHCCCCEEEEEEEEEEEEEEEECCCC
>Mature Secondary Structure 
AKTYQIDPAHSSITFTVKHMMISKVKGEFKEFDIKANGEPSDLANASVKVTIQAASIDT
CCEEECCCCCCEEEEEEHHHHHHHHCCCCEEEEEECCCCCCCCCCCEEEEEEEEEEECC
NNTDRDNHLRSGDFFNAEEHPHLVFHSTSFRSKGGGEFELTGDLTIRGTTREETFEVEYE
CCCCCCCCCCCCCCCCCCCCCEEEEEECCCCCCCCCEEEEEEEEEEEECCCCEEEEEEEC
GSAKDPWGNTKHAFSGEGSLNREDYGLTWNQALEAGGVLVDKKVKFEFELQFTESEA
CCCCCCCCCCCCEECCCCCCCCCCCCCCHHHHHCCCCEEEEEEEEEEEEEEEECCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA