| Definition | Exiguobacterium sp. AT1b, complete genome. |
|---|---|
| Accession | NC_012673 |
| Length | 2,999,895 |
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The map label for this gene is 229918075
Identifier: 229918075
GI number: 229918075
Start: 2308573
End: 2309217
Strand: Direct
Name: 229918075
Synonym: EAT1b_2354
Alternate gene names: NA
Gene position: 2308573-2309217 (Clockwise)
Preceding gene: 229918074
Following gene: 229918076
Centisome position: 76.96
GC content: 44.65
Gene sequence:
>645_bases ATGAAGACACCGTTTGATCAGTTTCGTGAATTAGCGAATGAATTGACGAAAGAAATTTCGAAAGAAGTGAAGAAATACCA GGATAAAGAGATGCCACGTTCAAGTGGAGAAGCGGAATTGAACCGTCATATCCGTGGAGCGGAGAAGGAAGCGTTGTCGG TTGAACGACTCGTGGAACGTCAACGTACATTGCTTGCAGAACTTGCTGAAAAACGTGATGATGCCAAGAAGATGGCAGAT AAACGATATGAGCAGACAGAACTGGCGAAACAAGCCGGGGAAGAAAAGTTGGCAGAACGTGCGGCACTCGAATCCAAACA CTACGGGGAACAGTACCGTTACTTTGAAGGATTGATTGACGAGGGTGAGCGCGAGTTGGATACATTAGAGCGTCGTGCGC TCGAGATGAAACTCAAACTCGATGAGATGCAAAATAAACGTTATGAGTTTGCGATGCGCGAAAACCTAGACTTGTTAAAA GGGGCACTCGACCAAATCTTTGGTCAAAATACGTCTCAGTCTCATCCGTTCACTGAGGAAGACAAGAAAGAACAACCTGT TGAAGAGAAGCAAGACACACAGGAAGATGAAGATGATTTTGAAGCAAAATTGAAAGAACTGGAGCGTCGCTTTAAACAAG AGTGA
Upstream 100 bases:
>100_bases GCCGACGGAACGCGTGCTAGCCGTAGCAGCTTCCAACAGTTCGATCAAGTGTGGCAAAAATTTGTTAATCGTCGTTGAGA TTTCATAAGGAGGATTCACC
Downstream 100 bases:
>100_bases GGTGACGGTTCGGCGATGACCTGAACAAGGTCATCGCTTTCTTTGCTTCATACATATGAACAGAAAGGGGGAATGGACAT GGAACGTTGGAACACACGTC
Product: PspA/IM30 family protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 214; Mature: 214
Protein sequence:
>214_residues MKTPFDQFRELANELTKEISKEVKKYQDKEMPRSSGEAELNRHIRGAEKEALSVERLVERQRTLLAELAEKRDDAKKMAD KRYEQTELAKQAGEEKLAERAALESKHYGEQYRYFEGLIDEGERELDTLERRALEMKLKLDEMQNKRYEFAMRENLDLLK GALDQIFGQNTSQSHPFTEEDKKEQPVEEKQDTQEDEDDFEAKLKELERRFKQE
Sequences:
>Translated_214_residues MKTPFDQFRELANELTKEISKEVKKYQDKEMPRSSGEAELNRHIRGAEKEALSVERLVERQRTLLAELAEKRDDAKKMAD KRYEQTELAKQAGEEKLAERAALESKHYGEQYRYFEGLIDEGERELDTLERRALEMKLKLDEMQNKRYEFAMRENLDLLK GALDQIFGQNTSQSHPFTEEDKKEQPVEEKQDTQEDEDDFEAKLKELERRFKQE >Mature_214_residues MKTPFDQFRELANELTKEISKEVKKYQDKEMPRSSGEAELNRHIRGAEKEALSVERLVERQRTLLAELAEKRDDAKKMAD KRYEQTELAKQAGEEKLAERAALESKHYGEQYRYFEGLIDEGERELDTLERRALEMKLKLDEMQNKRYEFAMRENLDLLK GALDQIFGQNTSQSHPFTEEDKKEQPVEEKQDTQEDEDDFEAKLKELERRFKQE
Specific function: Unknown
COG id: COG1842
COG function: function code KT; Phage shock protein A (IM30), suppresses sigma54-dependent transcription
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 25440; Mature: 25440
Theoretical pI: Translated: 4.71; Mature: 4.71
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.8 %Met (Translated Protein) 2.8 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.8 %Met (Mature Protein) 2.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKTPFDQFRELANELTKEISKEVKKYQDKEMPRSSGEAELNRHIRGAEKEALSVERLVER CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHCCHHHHHHHHHHHHHH QRTLLAELAEKRDDAKKMADKRYEQTELAKQAGEEKLAERAALESKHYGEQYRYFEGLID HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH EGERELDTLERRALEMKLKLDEMQNKRYEFAMRENLDLLKGALDQIFGQNTSQSHPFTEE CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCC DKKEQPVEEKQDTQEDEDDFEAKLKELERRFKQE HHHCCCCHHHHCCCCCHHHHHHHHHHHHHHHCCC >Mature Secondary Structure MKTPFDQFRELANELTKEISKEVKKYQDKEMPRSSGEAELNRHIRGAEKEALSVERLVER CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHCCHHHHHHHHHHHHHH QRTLLAELAEKRDDAKKMADKRYEQTELAKQAGEEKLAERAALESKHYGEQYRYFEGLID HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH EGERELDTLERRALEMKLKLDEMQNKRYEFAMRENLDLLKGALDQIFGQNTSQSHPFTEE CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCC DKKEQPVEEKQDTQEDEDDFEAKLKELERRFKQE HHHCCCCHHHHCCCCCHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA