| Definition | Exiguobacterium sp. AT1b, complete genome. |
|---|---|
| Accession | NC_012673 |
| Length | 2,999,895 |
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The map label for this gene is 229918063
Identifier: 229918063
GI number: 229918063
Start: 2297518
End: 2298108
Strand: Direct
Name: 229918063
Synonym: EAT1b_2342
Alternate gene names: NA
Gene position: 2297518-2298108 (Clockwise)
Preceding gene: 229918062
Following gene: 229918064
Centisome position: 76.59
GC content: 48.56
Gene sequence:
>591_bases ATGGACATAGTAGACGTCATCCGTGCGGCGAGTTCGATGCACTCAGAGAATCGACCGTTTGTCGTGGCGATTGATGGACT GAGCGGAGCGGGCAAGACGACGCTCGTTTCATATTTGAACAATGACCCTAGCATTTACGTTCTTCACATCGATGACTATA TCGTCGAACGTGACAGACGCTATCAGACCGGACAGCTTGAATCGACTGAGTATTACGCACTTCAATGGGACGTGTCACGC TTAGAACGTGAACTGTTTCGTCCATTGAGGAATGGGATAACGGTATTGACGTTACCTCGTTACGTGTATGAACGAGATGT CATCGCAGAAGAGATCGTGGACATATCATGCGCACATACAGTTGTCGTAGAAGGGATTTTTCTACAACGTCCGGAATGGC GTTCTTATTTCGACTATGTGATTTATCTCGACTGTCCCCGAAAAGTTCGGTACGAGCGAGTACTGAACCGGGATACATAC CTCGGCGATCCAACAGCACGGCTTGAAAAATACAAGCGTAGGTATTGGCCCGGGGAAGATTTGTATCTTCAGCACGTCGA CCCGAAAAGAGGAGCAGACATCGTGCTCTGA
Upstream 100 bases:
>100_bases TTGATTGAGAGTGCGCCTCCAGGAGCGCGTGGTTGGGTACTCTGGTAAACTGAAGTCAGCTCATTCGTGAGCTGACTTCT TTTGTGTGAGGAGGAACGAT
Downstream 100 bases:
>100_bases CTGAACGTTTCAACATCTGACGTACGTGTCAGATGTTTTTTGTTTGGAGAAAATTTGAAAAAATGATTGACGTCTTAGTG TATTACGCTAATAATACAGT
Product: uridine kinase
Products: NA
Alternate protein names: Phosphoribulokinase / Uridine Kinase Family; Pantothenate Kinase Protein
Number of amino acids: Translated: 196; Mature: 196
Protein sequence:
>196_residues MDIVDVIRAASSMHSENRPFVVAIDGLSGAGKTTLVSYLNNDPSIYVLHIDDYIVERDRRYQTGQLESTEYYALQWDVSR LERELFRPLRNGITVLTLPRYVYERDVIAEEIVDISCAHTVVVEGIFLQRPEWRSYFDYVIYLDCPRKVRYERVLNRDTY LGDPTARLEKYKRRYWPGEDLYLQHVDPKRGADIVL
Sequences:
>Translated_196_residues MDIVDVIRAASSMHSENRPFVVAIDGLSGAGKTTLVSYLNNDPSIYVLHIDDYIVERDRRYQTGQLESTEYYALQWDVSR LERELFRPLRNGITVLTLPRYVYERDVIAEEIVDISCAHTVVVEGIFLQRPEWRSYFDYVIYLDCPRKVRYERVLNRDTY LGDPTARLEKYKRRYWPGEDLYLQHVDPKRGADIVL >Mature_196_residues MDIVDVIRAASSMHSENRPFVVAIDGLSGAGKTTLVSYLNNDPSIYVLHIDDYIVERDRRYQTGQLESTEYYALQWDVSR LERELFRPLRNGITVLTLPRYVYERDVIAEEIVDISCAHTVVVEGIFLQRPEWRSYFDYVIYLDCPRKVRYERVLNRDTY LGDPTARLEKYKRRYWPGEDLYLQHVDPKRGADIVL
Specific function: Unknown
COG id: COG0572
COG function: function code F; Uridine kinase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 23101; Mature: 23101
Theoretical pI: Translated: 5.37; Mature: 5.37
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 1.0 %Met (Translated Protein) 2.0 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 1.0 %Met (Mature Protein) 2.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MDIVDVIRAASSMHSENRPFVVAIDGLSGAGKTTLVSYLNNDPSIYVLHIDDYIVERDRR CCHHHHHHHHHHHCCCCCCEEEEEECCCCCCHHHHHHHHCCCCCEEEEEECHHHHHCCCC YQTGQLESTEYYALQWDVSRLERELFRPLRNGITVLTLPRYVYERDVIAEEIVDISCAHT CCCCCCCCCEEEEEEECHHHHHHHHHHHHHCCCEEEEECHHHHHHHHHHHHHHHHHHHHH VVVEGIFLQRPEWRSYFDYVIYLDCPRKVRYERVLNRDTYLGDPTARLEKYKRRYWPGED HHHHHHHCCCCCCCCCEEEEEEEECCCHHHHHHHHCCCCCCCCCHHHHHHHHHHCCCCCC LYLQHVDPKRGADIVL EEEEECCCCCCCCCCC >Mature Secondary Structure MDIVDVIRAASSMHSENRPFVVAIDGLSGAGKTTLVSYLNNDPSIYVLHIDDYIVERDRR CCHHHHHHHHHHHCCCCCCEEEEEECCCCCCHHHHHHHHCCCCCEEEEEECHHHHHCCCC YQTGQLESTEYYALQWDVSRLERELFRPLRNGITVLTLPRYVYERDVIAEEIVDISCAHT CCCCCCCCCEEEEEEECHHHHHHHHHHHHHCCCEEEEECHHHHHHHHHHHHHHHHHHHHH VVVEGIFLQRPEWRSYFDYVIYLDCPRKVRYERVLNRDTYLGDPTARLEKYKRRYWPGED HHHHHHHCCCCCCCCCEEEEEEEECCCHHHHHHHHCCCCCCCCCHHHHHHHHHHCCCCCC LYLQHVDPKRGADIVL EEEEECCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA