| Definition | Exiguobacterium sp. AT1b, complete genome. |
|---|---|
| Accession | NC_012673 |
| Length | 2,999,895 |
Click here to switch to the map view.
The map label for this gene is 229918054
Identifier: 229918054
GI number: 229918054
Start: 2286814
End: 2288028
Strand: Direct
Name: 229918054
Synonym: EAT1b_2333
Alternate gene names: NA
Gene position: 2286814-2288028 (Clockwise)
Preceding gene: 229918053
Following gene: 229918055
Centisome position: 76.23
GC content: 45.76
Gene sequence:
>1215_bases ATGAATCATTCAAACTTGGTACATAAACGAGAAAATTTATACTTCTCATTATTAGTCGCAGCAAGCGTACTCGTCTTGAT TTTAGGAATCGTACTGACAATTGCATCATTCGGTCTTTTCTTGTGGATCATCGGGATAATCGTAGCACTTTCAATGTTTA CGCACTGGATTCAGATCGGATATATTCGGACGAACGGTGTCAAGGTGACGCCTCGTCAGTTCGCAGAGCTTCATGAACTG GTTCAACGCGTCGGGGCTGAGATGGGGATTCGGTTGTTGCCGGATGTTTATATCTTACAAGCTGGTGGCGTGTTAAATGC TTTCGCCACGCGATTCTTCCAAAAGAATATGGTCATCTTATATTCTGATGTCGTGGAATTGACACGTACTGGACAGACGA AAGAAGTCGAGTTTGTCATCGCGCATGAATTGGCACATATTCGTCGCAACCACGTTCAAAAACAATGGGTTGTCTTACTT GGTGGCATCATCCCGTTTTTAGGATCTGCTTATTCGCGTGCTTGTGAATATACGTGCGACCGGATGGCGGCGCATTATCT TCAAGATTCAGGAGCAGCGAAACGAGCGTTGACCGTACTTGCGATCGGAGGACCGCTCGCGAAAGAAGTGAATGAGTTTG ACTATCTGTATGAAGCGAGCCGGGAGAACGGATTCATCGCGAAATATAGTGAACTGTTGTCGACGCATCCGACGTTACCG AAACGCATCGCGGCGATTGCGACACATGCGGGCGAAGAAAACGTACCGGTCTTTAAAACAGCGGGATATGTGAAAGCCTC TATCATTTCGATGATTCTATTGACTGTCATCGGAAACGGAGCCATCATCGCCTTACTCGTCATGAACGATGATTTATCTG ATTTTGTCGCATCGGCCATGAGCGAGGATTTCGAAGAGGATTGGGAAATGGATTTAGGAGAACCGATTCAAGAATTGACG TTCATGAATGCGAGTTATGAAGAAATTGAAGCGGAACTGGCAAACGTGACGGATGTGAACATTCAAGACGAATATGGGGA AACACCGCTCCATAACTTGTTCTATAATGACGACGTCGATTCTGAGACGGTCCGTCTCTTACTTGATCACGGTGCAGACG TGACCATTGAGAACGAAGAAGGTATGACACCGATTGATGTGGCGCGAGAAATGGGACACGGTCCACAACTCATTGATTTA ATGGAATCGTATTAA
Upstream 100 bases:
>100_bases TAGAAACTGACGAATCCGTCAGTTTCTATTTTTTTCGTTGTTTCTTCTGGAAGGAACGGTATAATTAAACATGTATTTTG GAAAAAGAAGGAGAAATTAG
Downstream 100 bases:
>100_bases TCGTCGCGTAATCCTTGTTTCGAAAGAAACGAGGATTCTTTTTTAGGATTATTGCAAACGTTTGCATAGTGCGTGATATA CTCATGAGGTAGGGGGGATA
Product: peptidase M48 Ste24p
Products: NA
Alternate protein names: Zn-Dependent Protease With Chaperone Function; Ankyrin Repeat-Containing Protein; Peptidase M; Zn-Dependent Protease; Protease
Number of amino acids: Translated: 404; Mature: 404
Protein sequence:
>404_residues MNHSNLVHKRENLYFSLLVAASVLVLILGIVLTIASFGLFLWIIGIIVALSMFTHWIQIGYIRTNGVKVTPRQFAELHEL VQRVGAEMGIRLLPDVYILQAGGVLNAFATRFFQKNMVILYSDVVELTRTGQTKEVEFVIAHELAHIRRNHVQKQWVVLL GGIIPFLGSAYSRACEYTCDRMAAHYLQDSGAAKRALTVLAIGGPLAKEVNEFDYLYEASRENGFIAKYSELLSTHPTLP KRIAAIATHAGEENVPVFKTAGYVKASIISMILLTVIGNGAIIALLVMNDDLSDFVASAMSEDFEEDWEMDLGEPIQELT FMNASYEEIEAELANVTDVNIQDEYGETPLHNLFYNDDVDSETVRLLLDHGADVTIENEEGMTPIDVAREMGHGPQLIDL MESY
Sequences:
>Translated_404_residues MNHSNLVHKRENLYFSLLVAASVLVLILGIVLTIASFGLFLWIIGIIVALSMFTHWIQIGYIRTNGVKVTPRQFAELHEL VQRVGAEMGIRLLPDVYILQAGGVLNAFATRFFQKNMVILYSDVVELTRTGQTKEVEFVIAHELAHIRRNHVQKQWVVLL GGIIPFLGSAYSRACEYTCDRMAAHYLQDSGAAKRALTVLAIGGPLAKEVNEFDYLYEASRENGFIAKYSELLSTHPTLP KRIAAIATHAGEENVPVFKTAGYVKASIISMILLTVIGNGAIIALLVMNDDLSDFVASAMSEDFEEDWEMDLGEPIQELT FMNASYEEIEAELANVTDVNIQDEYGETPLHNLFYNDDVDSETVRLLLDHGADVTIENEEGMTPIDVAREMGHGPQLIDL MESY >Mature_404_residues MNHSNLVHKRENLYFSLLVAASVLVLILGIVLTIASFGLFLWIIGIIVALSMFTHWIQIGYIRTNGVKVTPRQFAELHEL VQRVGAEMGIRLLPDVYILQAGGVLNAFATRFFQKNMVILYSDVVELTRTGQTKEVEFVIAHELAHIRRNHVQKQWVVLL GGIIPFLGSAYSRACEYTCDRMAAHYLQDSGAAKRALTVLAIGGPLAKEVNEFDYLYEASRENGFIAKYSELLSTHPTLP KRIAAIATHAGEENVPVFKTAGYVKASIISMILLTVIGNGAIIALLVMNDDLSDFVASAMSEDFEEDWEMDLGEPIQELT FMNASYEEIEAELANVTDVNIQDEYGETPLHNLFYNDDVDSETVRLLLDHGADVTIENEEGMTPIDVAREMGHGPQLIDL MESY
Specific function: Unknown
COG id: COG0501
COG function: function code O; Zn-dependent protease with chaperone function
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 45013; Mature: 45013
Theoretical pI: Translated: 4.49; Mature: 4.49
Prosite motif: PS50088 ANK_REPEAT ; PS50297 ANK_REP_REGION
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 3.2 %Met (Translated Protein) 3.7 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 3.2 %Met (Mature Protein) 3.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNHSNLVHKRENLYFSLLVAASVLVLILGIVLTIASFGLFLWIIGIIVALSMFTHWIQIG CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEE YIRTNGVKVTPRQFAELHELVQRVGAEMGIRLLPDVYILQAGGVLNAFATRFFQKNMVIL EEEECCEEECHHHHHHHHHHHHHHHHHCCHHHCCCEEEEECCCHHHHHHHHHHHCCCEEE YSDVVELTRTGQTKEVEFVIAHELAHIRRNHVQKQWVVLLGGIIPFLGSAYSRACEYTCD HHHHHHHHHCCCCCEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH RMAAHYLQDSGAAKRALTVLAIGGPLAKEVNEFDYLYEASRENGFIAKYSELLSTHPTLP HHHHHHHHCCCCHHHEEEEEEECCHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHCCCCHH KRIAAIATHAGEENVPVFKTAGYVKASIISMILLTVIGNGAIIALLVMNDDLSDFVASAM HHHHHHHHHCCCCCCCEEECCCHHHHHHHHHHHHHHHCCCEEEEEEEECCCHHHHHHHHH SEDFEEDWEMDLGEPIQELTFMNASYEEIEAELANVTDVNIQDEYGETPLHNLFYNDDVD HHHHHHHHCCCCCCHHHHHHHCCCCHHHHHHHHHCCEECCCCCCCCCCCHHHCCCCCCCC SETVRLLLDHGADVTIENEEGMTPIDVAREMGHGPQLIDLMESY HHHHHHHHHCCCCEEEECCCCCCHHHHHHHCCCCCHHHHHHHCC >Mature Secondary Structure MNHSNLVHKRENLYFSLLVAASVLVLILGIVLTIASFGLFLWIIGIIVALSMFTHWIQIG CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEE YIRTNGVKVTPRQFAELHELVQRVGAEMGIRLLPDVYILQAGGVLNAFATRFFQKNMVIL EEEECCEEECHHHHHHHHHHHHHHHHHCCHHHCCCEEEEECCCHHHHHHHHHHHCCCEEE YSDVVELTRTGQTKEVEFVIAHELAHIRRNHVQKQWVVLLGGIIPFLGSAYSRACEYTCD HHHHHHHHHCCCCCEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH RMAAHYLQDSGAAKRALTVLAIGGPLAKEVNEFDYLYEASRENGFIAKYSELLSTHPTLP HHHHHHHHCCCCHHHEEEEEEECCHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHCCCCHH KRIAAIATHAGEENVPVFKTAGYVKASIISMILLTVIGNGAIIALLVMNDDLSDFVASAM HHHHHHHHHCCCCCCCEEECCCHHHHHHHHHHHHHHHCCCEEEEEEEECCCHHHHHHHHH SEDFEEDWEMDLGEPIQELTFMNASYEEIEAELANVTDVNIQDEYGETPLHNLFYNDDVD HHHHHHHHCCCCCCHHHHHHHCCCCHHHHHHHHHCCEECCCCCCCCCCCHHHCCCCCCCC SETVRLLLDHGADVTIENEEGMTPIDVAREMGHGPQLIDLMESY HHHHHHHHHCCCCEEEECCCCCCHHHHHHHCCCCCHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA