| Definition | Exiguobacterium sp. AT1b, complete genome. |
|---|---|
| Accession | NC_012673 |
| Length | 2,999,895 |
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The map label for this gene is sugE [H]
Identifier: 229918012
GI number: 229918012
Start: 2248432
End: 2248776
Strand: Direct
Name: sugE [H]
Synonym: EAT1b_2291
Alternate gene names: 229918012
Gene position: 2248432-2248776 (Clockwise)
Preceding gene: 229918011
Following gene: 229918013
Centisome position: 74.95
GC content: 50.43
Gene sequence:
>345_bases ATGAGTAAAGAGAAGGGTGCATGGATTTCCCTCCTGTTTGCAGGACTACTCGAAATCGTCTGGGCGACGACGATGAAGCT GTCTGAAGGCTTCACGGTTTTAGGTCCGACATTGTGGACGATCGTGTTATTGATTCTTAGTTTCGGATTATTGGCGAAAG CGTTTCGGACGCTCCCTGCCGGTACGGGGTACGCCGTATTCACAGGAATCGGAGCGGTCGGCACAGTCATAGTTGGTGCC TTCTTATTTGACGAGGGGCTTAATGGATGGAAACTGATCCTTGTGACGACGTTGATTGTCGGTATCATCGGATTGAAGCA AGTGACAGGAGGGGAAGAGGCATGA
Upstream 100 bases:
>100_bases TTTTTAGATGGCGCCTTACTGTCGTTATTCACATTTGAAGAGGACCGGGAGATGCGACAACAAGCTGCGTTTCGAATTTT CAAGAAAGGGGTGGGTTGGG
Downstream 100 bases:
>100_bases GTTGGGTTTATCTGATTGGAGCGGGAATTGCTGAAATGACAGCCGTTTTCTTTATGGGGAAATCGAAAGGATACCAGATT TTGAAATGGTCGATTGCATC
Product: small multidrug resistance protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 114; Mature: 113
Protein sequence:
>114_residues MSKEKGAWISLLFAGLLEIVWATTMKLSEGFTVLGPTLWTIVLLILSFGLLAKAFRTLPAGTGYAVFTGIGAVGTVIVGA FLFDEGLNGWKLILVTTLIVGIIGLKQVTGGEEA
Sequences:
>Translated_114_residues MSKEKGAWISLLFAGLLEIVWATTMKLSEGFTVLGPTLWTIVLLILSFGLLAKAFRTLPAGTGYAVFTGIGAVGTVIVGA FLFDEGLNGWKLILVTTLIVGIIGLKQVTGGEEA >Mature_113_residues SKEKGAWISLLFAGLLEIVWATTMKLSEGFTVLGPTLWTIVLLILSFGLLAKAFRTLPAGTGYAVFTGIGAVGTVIVGAF LFDEGLNGWKLILVTTLIVGIIGLKQVTGGEEA
Specific function: Quaternary ammonium compound efflux pump. Confers resistance to cetylpyridinium, cetyldimethylethyl ammonium and cetrimide cations [H]
COG id: COG2076
COG function: function code P; Membrane transporters of cations and cationic drugs
Gene ontology:
Cell location: Cell inner membrane; Multi-pass membrane protein [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the small multidrug resistance (SMR) protein family. SugE (TC 2.A.7.1.4) subfamily [H]
Homologues:
Organism=Escherichia coli, GI87082378, Length=103, Percent_Identity=48.5436893203884, Blast_Score=91, Evalue=2e-20,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000390 [H]
Pfam domain/function: PF00893 Multi_Drug_Res [H]
EC number: NA
Molecular weight: Translated: 11986; Mature: 11854
Theoretical pI: Translated: 6.75; Mature: 6.75
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.8 %Met (Translated Protein) 1.8 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 0.9 %Met (Mature Protein) 0.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSKEKGAWISLLFAGLLEIVWATTMKLSEGFTVLGPTLWTIVLLILSFGLLAKAFRTLPA CCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCEEECHHHHHHHHHHHHHHHHHHHHHHCCC GTGYAVFTGIGAVGTVIVGAFLFDEGLNGWKLILVTTLIVGIIGLKQVTGGEEA CCCHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHCCCCCCC >Mature Secondary Structure SKEKGAWISLLFAGLLEIVWATTMKLSEGFTVLGPTLWTIVLLILSFGLLAKAFRTLPA CCCCHHHHHHHHHHHHHHHHHHHHHHHCCCEEECHHHHHHHHHHHHHHHHHHHHHHCCC GTGYAVFTGIGAVGTVIVGAFLFDEGLNGWKLILVTTLIVGIIGLKQVTGGEEA CCCHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 3308458 [H]