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The map label for this gene is cadC [H]

Identifier: 229918002

GI number: 229918002

Start: 2236071

End: 2236433

Strand: Direct

Name: cadC [H]

Synonym: EAT1b_2281

Alternate gene names: 229918002

Gene position: 2236071-2236433 (Clockwise)

Preceding gene: 229918000

Following gene: 229918003

Centisome position: 74.54

GC content: 45.18

Gene sequence:

>363_bases
ATGAAAGTGCCACAGTGTGAAACGATTGGAATTCAATCAGAGGACGTTCCAACGCTACAAACCGCCTTGGCGCAATTAGA
TGCGCCTCGAGTCAGTCGTTTGTTTAAAGCGTTCGCTGATCCGACCCGTCTAAAAGTGCTGTATGTGTTGACGCTCGAAC
ATGAACTATGTGTATGCGATGTGGCGGCCGTTATCGGTCACTCTAACGCGACCGCATCTCACCATTTGCGGACATTACTT
GAACAAGGATTGGTAAAGTATCGTAAAGAAGGGAAAGTCGTTTATTATTCATTGGATGATGAGCACGTGAGACAGCTCGT
TGAAATTGCATTGACACACAGTGAAGAACAAAAAGACGTTTAA

Upstream 100 bases:

>100_bases
ATTGTATTATAACAGATGGCGTTAAGTCAACTATAATATATAACAGATATATTCGGGATTTTTTGCTACACTATACACAT
CAAAAGACGAGGTGAAAAAA

Downstream 100 bases:

>100_bases
GTCCAATGACCGTCCCTCGAATGGGGACGGTCATTTTTTTGGTACTTGTCTTCGATTAAAATTCACGTTACGATATATTC
AAATGAACGTTTGAATGTTA

Product: ArsR family transcriptional regulator

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 120; Mature: 120

Protein sequence:

>120_residues
MKVPQCETIGIQSEDVPTLQTALAQLDAPRVSRLFKAFADPTRLKVLYVLTLEHELCVCDVAAVIGHSNATASHHLRTLL
EQGLVKYRKEGKVVYYSLDDEHVRQLVEIALTHSEEQKDV

Sequences:

>Translated_120_residues
MKVPQCETIGIQSEDVPTLQTALAQLDAPRVSRLFKAFADPTRLKVLYVLTLEHELCVCDVAAVIGHSNATASHHLRTLL
EQGLVKYRKEGKVVYYSLDDEHVRQLVEIALTHSEEQKDV
>Mature_120_residues
MKVPQCETIGIQSEDVPTLQTALAQLDAPRVSRLFKAFADPTRLKVLYVLTLEHELCVCDVAAVIGHSNATASHHLRTLL
EQGLVKYRKEGKVVYYSLDDEHVRQLVEIALTHSEEQKDV

Specific function: Transcriptional Repressor For The Arsefg Operon. Arse Is A Trans-Acting Regulatory Protein Which Controls Its Own Expression. The Repressive Effect Of Arse Is Alleviated By Oxyions Of +III Oxidation State Of Arsenic, Antimony, And Bismuth, As Well As Arse

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 HTH arsR-type DNA-binding domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001845
- InterPro:   IPR018334
- InterPro:   IPR011991 [H]

Pfam domain/function: PF01022 HTH_5 [H]

EC number: NA

Molecular weight: Translated: 13481; Mature: 13481

Theoretical pI: Translated: 6.23; Mature: 6.23

Prosite motif: PS00846 HTH_ARSR_1 ; PS50987 HTH_ARSR_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.5 %Cys     (Translated Protein)
0.8 %Met     (Translated Protein)
3.3 %Cys+Met (Translated Protein)
2.5 %Cys     (Mature Protein)
0.8 %Met     (Mature Protein)
3.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKVPQCETIGIQSEDVPTLQTALAQLDAPRVSRLFKAFADPTRLKVLYVLTLEHELCVCD
CCCCCCCCCCCCCCCCHHHHHHHHHCCCHHHHHHHHHHCCCCCEEEEEEEECCCCHHHHH
VAAVIGHSNATASHHLRTLLEQGLVKYRKEGKVVYYSLDDEHVRQLVEIALTHSEEQKDV
HHHHHCCCCCCHHHHHHHHHHHHHHHHHHCCCEEEEECCHHHHHHHHHHHHHCCCCCCCC
>Mature Secondary Structure
MKVPQCETIGIQSEDVPTLQTALAQLDAPRVSRLFKAFADPTRLKVLYVLTLEHELCVCD
CCCCCCCCCCCCCCCCHHHHHHHHHCCCHHHHHHHHHHCCCCCEEEEEEEECCCCHHHHH
VAAVIGHSNATASHHLRTLLEQGLVKYRKEGKVVYYSLDDEHVRQLVEIALTHSEEQKDV
HHHHHCCCCCCHHHHHHHHHHHHHHHHHHCCCEEEEECCHHHHHHHHHHHHHCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: DNA [C]

Specific reaction: Protein + DNA = Protein-DNA [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA