| Definition | Exiguobacterium sp. AT1b, complete genome. |
|---|---|
| Accession | NC_012673 |
| Length | 2,999,895 |
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The map label for this gene is nagA [H]
Identifier: 229917975
GI number: 229917975
Start: 2208270
End: 2209418
Strand: Direct
Name: nagA [H]
Synonym: EAT1b_2254
Alternate gene names: 229917975
Gene position: 2208270-2209418 (Clockwise)
Preceding gene: 229917974
Following gene: 229917976
Centisome position: 73.61
GC content: 51.78
Gene sequence:
>1149_bases ATGGGGACATTGATCAATGCTCGTATCGTGTCAGCAGAACAAACATGGGAACGTGGATATATCAGATGGAATGGTCAAAC GATTGATGAGATTGGATCGATGGAACAGTTTGAACAACAGGATGAGCATGTGATTGATGTCGCTGGAGCACTCGTGACAC CGGGTCTCATCGATGTGCATATCCATGGGGGATATGAAGTCGATACGATGGATGCGGATGAATCAAAACTTCGGCAGTTG AGTAACGACATGCTACAAGAAGGCGTCACTTCTTTTTTTGCGACGACCATCACGCAGTCAAAAGAAGCGATTGAGCATGC CTTGAAGGCGGTCCGAAACGTCATCGAAGCGCAGGATACGACACTCATCGGGATTCACTTGGAAGGTCCTTTCGTCAACG TGGAGATGGCTGGGGCACAGCCGGCGGAATATATTATCGACCCGGACGCCGAGCAGTTCCGAAAATGGCAAGAGCTCGCC GGCGGTCATATCCGCCTCGTTACGTATGCACCGGAACGGCCAGGTGCACGTGCATTTGAAGCGGTACTTCGCGAAACCGG TGCGATCGGTTCAGCGGGCCATACGAGCGCGACATTTGAAGAGAACAAGCAGGCGGGCGTCAAACACGGGACGCATCTTT ATAACCAAATGCGTGGGTTACATCATCGAGAACCCGGAACGGTAGGCTATTGTCTCTTAGAGGGTGGAGTCATCGCGGAA ATCATTCCGGATGGGATCCATAGTCGTCCGGAGATGGTCGACTTCGCGTTTCGCTTAAAAGGAGCAGATGAACTTGTCGT CATCACGGATGCGATGCGAGCAAAAGGACTGCCGGACGGACAATATGAGCTTGGCGGCCAACCGGTCATCGTAGCGGACG GGGCTGCGCGACTTCAAGCCGGGAACCTTGCGGGCAGTGTGTTGACGATGGACGCCGCATTCCGAAACATTCAGGCATAT ACGGGATGTACGGTGGAAGAAGCGGTAAAAATGACCTCGACGAATGCGGCCAAAGAATTCGGGTTGACGACAAAAGGCGA TATCAAATCGGGGTTTGATGCAGACTTTGTCGTTTGGGATGACACGACACATGTTCAGATGACTTTCGTCAAAGGTCGAA TCGTATATAAACGGGAGGAACAAAGATGA
Upstream 100 bases:
>100_bases CAAATGTGAACAATCTTTTATTTATTTAAAATTGGTCTATACAACTATACTTTTATCCGATATGATAACATGGAGGAAAA CAAAAAGGAGTGGTGAACCG
Downstream 100 bases:
>100_bases ATGTACTAGTCGCAAAGACGGCGAACGACGCGGAACGCATCGCCTATACGCTAATCAAAGAACGGATTTCAGGGAAACAT GACTTTGTACTCGGTCTCGC
Product: N-acetylglucosamine-6-phosphate deacetylase
Products: NA
Alternate protein names: GlcNAc 6-P deacetylase [H]
Number of amino acids: Translated: 382; Mature: 381
Protein sequence:
>382_residues MGTLINARIVSAEQTWERGYIRWNGQTIDEIGSMEQFEQQDEHVIDVAGALVTPGLIDVHIHGGYEVDTMDADESKLRQL SNDMLQEGVTSFFATTITQSKEAIEHALKAVRNVIEAQDTTLIGIHLEGPFVNVEMAGAQPAEYIIDPDAEQFRKWQELA GGHIRLVTYAPERPGARAFEAVLRETGAIGSAGHTSATFEENKQAGVKHGTHLYNQMRGLHHREPGTVGYCLLEGGVIAE IIPDGIHSRPEMVDFAFRLKGADELVVITDAMRAKGLPDGQYELGGQPVIVADGAARLQAGNLAGSVLTMDAAFRNIQAY TGCTVEEAVKMTSTNAAKEFGLTTKGDIKSGFDADFVVWDDTTHVQMTFVKGRIVYKREEQR
Sequences:
>Translated_382_residues MGTLINARIVSAEQTWERGYIRWNGQTIDEIGSMEQFEQQDEHVIDVAGALVTPGLIDVHIHGGYEVDTMDADESKLRQL SNDMLQEGVTSFFATTITQSKEAIEHALKAVRNVIEAQDTTLIGIHLEGPFVNVEMAGAQPAEYIIDPDAEQFRKWQELA GGHIRLVTYAPERPGARAFEAVLRETGAIGSAGHTSATFEENKQAGVKHGTHLYNQMRGLHHREPGTVGYCLLEGGVIAE IIPDGIHSRPEMVDFAFRLKGADELVVITDAMRAKGLPDGQYELGGQPVIVADGAARLQAGNLAGSVLTMDAAFRNIQAY TGCTVEEAVKMTSTNAAKEFGLTTKGDIKSGFDADFVVWDDTTHVQMTFVKGRIVYKREEQR >Mature_381_residues GTLINARIVSAEQTWERGYIRWNGQTIDEIGSMEQFEQQDEHVIDVAGALVTPGLIDVHIHGGYEVDTMDADESKLRQLS NDMLQEGVTSFFATTITQSKEAIEHALKAVRNVIEAQDTTLIGIHLEGPFVNVEMAGAQPAEYIIDPDAEQFRKWQELAG GHIRLVTYAPERPGARAFEAVLRETGAIGSAGHTSATFEENKQAGVKHGTHLYNQMRGLHHREPGTVGYCLLEGGVIAEI IPDGIHSRPEMVDFAFRLKGADELVVITDAMRAKGLPDGQYELGGQPVIVADGAARLQAGNLAGSVLTMDAAFRNIQAYT GCTVEEAVKMTSTNAAKEFGLTTKGDIKSGFDADFVVWDDTTHVQMTFVKGRIVYKREEQR
Specific function: N-acetylglucosamine utilization. [C]
COG id: COG1820
COG function: function code G; N-acetylglucosamine-6-phosphate deacetylase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the nagA family [H]
Homologues:
Organism=Homo sapiens, GI21361513, Length=437, Percent_Identity=31.8077803203661, Blast_Score=168, Evalue=9e-42, Organism=Homo sapiens, GI224922791, Length=430, Percent_Identity=31.8604651162791, Blast_Score=163, Evalue=2e-40, Organism=Escherichia coli, GI1786892, Length=335, Percent_Identity=31.3432835820896, Blast_Score=149, Evalue=2e-37, Organism=Caenorhabditis elegans, GI17553768, Length=386, Percent_Identity=31.8652849740933, Blast_Score=171, Evalue=4e-43, Organism=Drosophila melanogaster, GI19920392, Length=350, Percent_Identity=32.2857142857143, Blast_Score=162, Evalue=4e-40, Organism=Drosophila melanogaster, GI281361140, Length=363, Percent_Identity=31.6804407713499, Blast_Score=158, Evalue=5e-39,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR006680 - InterPro: IPR003764 - InterPro: IPR011059 [H]
Pfam domain/function: PF01979 Amidohydro_1 [H]
EC number: =3.5.1.25 [H]
Molecular weight: Translated: 41800; Mature: 41668
Theoretical pI: Translated: 4.73; Mature: 4.73
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 2.9 %Met (Translated Protein) 3.4 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 2.6 %Met (Mature Protein) 3.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGTLINARIVSAEQTWERGYIRWNGQTIDEIGSMEQFEQQDEHVIDVAGALVTPGLIDVH CCCEEEEEEEECHHHHHCCCEEECCCCHHHHCCHHHHHHHHHHHHHHHHHHHCCCEEEEE IHGGYEVDTMDADESKLRQLSNDMLQEGVTSFFATTITQSKEAIEHALKAVRNVIEAQDT EECCEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC TLIGIHLEGPFVNVEMAGAQPAEYIIDPDAEQFRKWQELAGGHIRLVTYAPERPGARAFE EEEEEEECCCEEEEEECCCCCCCEEECCCHHHHHHHHHHCCCEEEEEEECCCCCCHHHHH AVLRETGAIGSAGHTSATFEENKQAGVKHGTHLYNQMRGLHHREPGTVGYCLLEGGVIAE HHHHHHCCCCCCCCCCCCHHCCHHHCCHHHHHHHHHHHCCCCCCCCCEEEEEECCCEEEE IIPDGIHSRPEMVDFAFRLKGADELVVITDAMRAKGLPDGQYELGGQPVIVADGAARLQA ECCCCCCCCCHHEEHEEEECCCCCEEEEECHHHHCCCCCCCEECCCCEEEEECCCHHEEC GNLAGSVLTMDAAFRNIQAYTGCTVEEAVKMTSTNAAKEFGLTTKGDIKSGFDADFVVWD CCCCCCEEEHHHHHHHHHHHCCCCHHHHHHHHCCCHHHHCCCCCCCCCCCCCCCCEEEEC DTTHVQMTFVKGRIVYKREEQR CCCEEEEEEEEEEEEEEECCCC >Mature Secondary Structure GTLINARIVSAEQTWERGYIRWNGQTIDEIGSMEQFEQQDEHVIDVAGALVTPGLIDVH CCEEEEEEEECHHHHHCCCEEECCCCHHHHCCHHHHHHHHHHHHHHHHHHHCCCEEEEE IHGGYEVDTMDADESKLRQLSNDMLQEGVTSFFATTITQSKEAIEHALKAVRNVIEAQDT EECCEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC TLIGIHLEGPFVNVEMAGAQPAEYIIDPDAEQFRKWQELAGGHIRLVTYAPERPGARAFE EEEEEEECCCEEEEEECCCCCCCEEECCCHHHHHHHHHHCCCEEEEEEECCCCCCHHHHH AVLRETGAIGSAGHTSATFEENKQAGVKHGTHLYNQMRGLHHREPGTVGYCLLEGGVIAE HHHHHHCCCCCCCCCCCCHHCCHHHCCHHHHHHHHHHHCCCCCCCCCEEEEEECCCEEEE IIPDGIHSRPEMVDFAFRLKGADELVVITDAMRAKGLPDGQYELGGQPVIVADGAARLQA ECCCCCCCCCHHEEHEEEECCCCCEEEEECHHHHCCCCCCCEECCCCEEEEECCCHHEEC GNLAGSVLTMDAAFRNIQAYTGCTVEEAVKMTSTNAAKEFGLTTKGDIKSGFDADFVVWD CCCCCCEEEHHHHHHHHHHHCCCCHHHHHHHHCCCHHHHCCCCCCCCCCCCCCCCEEEEC DTTHVQMTFVKGRIVYKREEQR CCCEEEEEEEEEEEEEEECCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA