| Definition | Exiguobacterium sp. AT1b, complete genome. |
|---|---|
| Accession | NC_012673 |
| Length | 2,999,895 |
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The map label for this gene is purK [H]
Identifier: 229917945
GI number: 229917945
Start: 2171335
End: 2172429
Strand: Direct
Name: purK [H]
Synonym: EAT1b_2224
Alternate gene names: 229917945
Gene position: 2171335-2172429 (Clockwise)
Preceding gene: 229917944
Following gene: 229917946
Centisome position: 72.38
GC content: 48.4
Gene sequence:
>1095_bases ATGAGAATCGGAATTTTAGGTGGAGGACAACTTGGACGGATGATGTCACTCAGTGCGAGTGCAATGGGATACACGACACT TTGTCTTGACCCGAACCCCAATGCACCGACTGCTCAAGTGGCAGATTCAATTGTTGCCTCATTTGATGATGTCGATGCCG CAAAAGAACTCGCTGCTCGTTCAGACGTTGTGACGTATGAATTTGAGAACATCGATACGGAAATGATTGCAGCCATCGAA GAAAAATGCCCACAAGGTATGGACGTGTTGAAGGCGACGCAACATCGCATCTTAGAGAAACAGATGATTGAATCAGCGGG ACTACGTGTCGCACCATATGTTTCGGTACGTACGGTTCGAGATGTACGGCAGGCATATGAGAAGCTCGGCTACCCATTTG TCATCAAAACGTGTCGTTTCGGCTATGATGGGAAAGGGCAAACGGTCATTCGGTCGGAACATGACCTTCAGACCTTCGCT GAACATTTTGTCGAACAGGAATACGTCGCCGAAGCTTGGTTGCCATTTGAAAAAGAAATTTCAGTCATTGTGACGAGAGG GTATGACGAAACGTCGACATTCCCAATCAGTGAAAACATTCATCACAACAACATCCTACATTTATCGATTGTACCGGCTC GCGTATCAAATGAGATTCAAGAGGATGCAAGACACCTCGCTCTCCAGCTTGCAGACCATATCGGCTTAATGGGAACGCTC GCTGTCGAGCTGTTCGTCATGGCGGATGGCCGTCTATATGTGAATGAGCTTGCGCCGCGTCCGCACAACTCCGGGCACTA CACGATTGACGCTTGTGAAACCTCACAATTTGAACAACACATTCGAGCCGTGACCGGGATGCGCCTCGGACGGACGAGAT TGACATCGCCTGTCGTCATGGTCAACCTTCTCGGCGAGCATATGCCACGACTTCATGTCAAAGCATTGCCATCGAATGTT AAACTACATCTGTATGGAAAAGATGAAGCGAAGACAGGTCGCAAAATGGGACATTTGAACGTCCTTGGTGACACGGTCGA AGAAGCGCTTCATACCATCGAACAACTGGCAATTTGGAAGGAGACCGTTTTATGA
Upstream 100 bases:
>100_bases AGATCCTCAGCATCCACTCCACAGACATAACACATCGACTGGATGCATTTCGTGAGAAGAAACAAGAGATGGCGATGCGA GGAACGGAGGAGTTGGTCTG
Downstream 100 bases:
>100_bases TTTCACGCTACACCCGCCCAGAGATGGCAAACATTTGGACTGATCAAAACAAATTCGAGGCTTGGTTAAAAGTTGAACTT TATGCCTGTGAGGCTTGGAG
Product: phosphoribosylaminoimidazole carboxylase, ATPase
Products: NA
Alternate protein names: N5-CAIR synthase; 5-(carboxyamino)imidazole ribonucleotide synthetase [H]
Number of amino acids: Translated: 364; Mature: 364
Protein sequence:
>364_residues MRIGILGGGQLGRMMSLSASAMGYTTLCLDPNPNAPTAQVADSIVASFDDVDAAKELAARSDVVTYEFENIDTEMIAAIE EKCPQGMDVLKATQHRILEKQMIESAGLRVAPYVSVRTVRDVRQAYEKLGYPFVIKTCRFGYDGKGQTVIRSEHDLQTFA EHFVEQEYVAEAWLPFEKEISVIVTRGYDETSTFPISENIHHNNILHLSIVPARVSNEIQEDARHLALQLADHIGLMGTL AVELFVMADGRLYVNELAPRPHNSGHYTIDACETSQFEQHIRAVTGMRLGRTRLTSPVVMVNLLGEHMPRLHVKALPSNV KLHLYGKDEAKTGRKMGHLNVLGDTVEEALHTIEQLAIWKETVL
Sequences:
>Translated_364_residues MRIGILGGGQLGRMMSLSASAMGYTTLCLDPNPNAPTAQVADSIVASFDDVDAAKELAARSDVVTYEFENIDTEMIAAIE EKCPQGMDVLKATQHRILEKQMIESAGLRVAPYVSVRTVRDVRQAYEKLGYPFVIKTCRFGYDGKGQTVIRSEHDLQTFA EHFVEQEYVAEAWLPFEKEISVIVTRGYDETSTFPISENIHHNNILHLSIVPARVSNEIQEDARHLALQLADHIGLMGTL AVELFVMADGRLYVNELAPRPHNSGHYTIDACETSQFEQHIRAVTGMRLGRTRLTSPVVMVNLLGEHMPRLHVKALPSNV KLHLYGKDEAKTGRKMGHLNVLGDTVEEALHTIEQLAIWKETVL >Mature_364_residues MRIGILGGGQLGRMMSLSASAMGYTTLCLDPNPNAPTAQVADSIVASFDDVDAAKELAARSDVVTYEFENIDTEMIAAIE EKCPQGMDVLKATQHRILEKQMIESAGLRVAPYVSVRTVRDVRQAYEKLGYPFVIKTCRFGYDGKGQTVIRSEHDLQTFA EHFVEQEYVAEAWLPFEKEISVIVTRGYDETSTFPISENIHHNNILHLSIVPARVSNEIQEDARHLALQLADHIGLMGTL AVELFVMADGRLYVNELAPRPHNSGHYTIDACETSQFEQHIRAVTGMRLGRTRLTSPVVMVNLLGEHMPRLHVKALPSNV KLHLYGKDEAKTGRKMGHLNVLGDTVEEALHTIEQLAIWKETVL
Specific function: Catalyzes the ATP-dependent conversion of 5- aminoimidazole ribonucleotide (AIR) and HCO(3)(-) to N5- carboxyaminoimidazole ribonucleotide (N5-CAIR) [H]
COG id: COG0026
COG function: function code F; Phosphoribosylaminoimidazole carboxylase (NCAIR synthetase)
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 ATP-grasp domain [H]
Homologues:
Organism=Escherichia coli, GI1786733, Length=360, Percent_Identity=30.8333333333333, Blast_Score=155, Evalue=5e-39, Organism=Escherichia coli, GI1788155, Length=380, Percent_Identity=25.2631578947368, Blast_Score=107, Evalue=1e-24, Organism=Saccharomyces cerevisiae, GI6324702, Length=374, Percent_Identity=33.1550802139037, Blast_Score=213, Evalue=4e-56,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR006115 - InterPro: IPR005875 - InterPro: IPR011761 - InterPro: IPR003135 - InterPro: IPR013815 - InterPro: IPR013816 - InterPro: IPR013817 - InterPro: IPR016185 - InterPro: IPR011054 [H]
Pfam domain/function: PF02222 ATP-grasp; PF03446 NAD_binding_2 [H]
EC number: =6.3.4.18 [H]
Molecular weight: Translated: 40572; Mature: 40572
Theoretical pI: Translated: 5.96; Mature: 5.96
Prosite motif: PS50975 ATP_GRASP
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 3.6 %Met (Translated Protein) 4.7 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 3.6 %Met (Mature Protein) 4.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRIGILGGGQLGRMMSLSASAMGYTTLCLDPNPNAPTAQVADSIVASFDDVDAAKELAAR CEEEEECCCCHHHHHHHHHHHCCEEEEEECCCCCCCHHHHHHHHHHHHCHHHHHHHHHHC SDVVTYEFENIDTEMIAAIEEKCPQGMDVLKATQHRILEKQMIESAGLRVAPYVSVRTVR CCEEEEEECCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHCCCEEECCHHHHHHH DVRQAYEKLGYPFVIKTCRFGYDGKGQTVIRSEHDLQTFAEHFVEQEYVAEAWLPFEKEI HHHHHHHHCCCCEEEEEECCCCCCCCCEEEECCHHHHHHHHHHHHHHHHHHHCCCCCCCE SVIVTRGYDETSTFPISENIHHNNILHLSIVPARVSNEIQEDARHLALQLADHIGLMGTL EEEEEECCCCCCCCCCCCCCCCCCEEEEEEECHHHHHHHHHHHHHHHHHHHHHHHHHHHH AVELFVMADGRLYVNELAPRPHNSGHYTIDACETSQFEQHIRAVTGMRLGRTRLTSPVVM HHEEEEEECCEEEEECCCCCCCCCCCEEEEECCHHHHHHHHHHHHCCCCCCHHHCCHHHH VNLLGEHMPRLHVKALPSNVKLHLYGKDEAKTGRKMGHLNVLGDTVEEALHTIEQLAIWK HHHHHHHCCCEEEEECCCCCEEEEEECCHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHH ETVL HHCC >Mature Secondary Structure MRIGILGGGQLGRMMSLSASAMGYTTLCLDPNPNAPTAQVADSIVASFDDVDAAKELAAR CEEEEECCCCHHHHHHHHHHHCCEEEEEECCCCCCCHHHHHHHHHHHHCHHHHHHHHHHC SDVVTYEFENIDTEMIAAIEEKCPQGMDVLKATQHRILEKQMIESAGLRVAPYVSVRTVR CCEEEEEECCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHCCCEEECCHHHHHHH DVRQAYEKLGYPFVIKTCRFGYDGKGQTVIRSEHDLQTFAEHFVEQEYVAEAWLPFEKEI HHHHHHHHCCCCEEEEEECCCCCCCCCEEEECCHHHHHHHHHHHHHHHHHHHCCCCCCCE SVIVTRGYDETSTFPISENIHHNNILHLSIVPARVSNEIQEDARHLALQLADHIGLMGTL EEEEEECCCCCCCCCCCCCCCCCCEEEEEEECHHHHHHHHHHHHHHHHHHHHHHHHHHHH AVELFVMADGRLYVNELAPRPHNSGHYTIDACETSQFEQHIRAVTGMRLGRTRLTSPVVM HHEEEEEECCEEEEECCCCCCCCCCCEEEEECCHHHHHHHHHHHHCCCCCCHHHCCHHHH VNLLGEHMPRLHVKALPSNVKLHLYGKDEAKTGRKMGHLNVLGDTVEEALHTIEQLAIWK HHHHHHHCCCEEEEECCCCCEEEEEECCHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHH ETVL HHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 3036807; 9384377 [H]