| Definition | Exiguobacterium sp. AT1b, complete genome. |
|---|---|
| Accession | NC_012673 |
| Length | 2,999,895 |
Click here to switch to the map view.
The map label for this gene is mtlR [H]
Identifier: 229917922
GI number: 229917922
Start: 2133797
End: 2135827
Strand: Direct
Name: mtlR [H]
Synonym: EAT1b_2201
Alternate gene names: 229917922
Gene position: 2133797-2135827 (Clockwise)
Preceding gene: 229917921
Following gene: 229917923
Centisome position: 71.13
GC content: 50.96
Gene sequence:
>2031_bases ATGAGACATGAGTGGACCGCGAGAGAACGGTCGATTTTACTACACTTATTGGCAACTGAGACATCGACACCGCTCGCCGA AATCGCGCAGGCGGTGAATTTGTCTGAGCGTACGATTCAACGAGAAAGACAATTACTTGAAGGCATCTTAAAAGAGTTCG AACTCGAACTCGCTTGGCAACGAGGGCATGGACTGAGTCTGGTCGGCAAACCATCTGCGAAGCAACAGTTACGAGAAGAC CTCATCTTATCCGCAGAAGCGATCCCGACGAGCGAGGACCGCTTATTTGAGCTGGCGTGGCGTCTCTTGTTCGAGAACGA TACACTCAAATTGCAGGCGGTCGCCAAACAGATGCACGTCTCGCCGAGCACGTTGACGCAAGACTTAGAGAAATTGGACA GATGGTTCGAAGAGTACCATTTAGAAGTTGAACGGAAAAAAGGTGTTGGGGCTAGAGTGCTCGGTTATGAGTCCGAGAAG CGTAAGCTACTCATCAACGCTCTGCTTGCCCACTGGGACACGCTCGCATTTTATCGCTTCGTCCGCGGAGAAGACGACTA CATTCCTGCTTTTTTGAAGACGGTACCATGCGAGGAGATGCTTGAAGGTCTTCGAGACGGTTATGATTATTTGAAGTCCC GCGCGTTTGAGCGGATGGATGACCGCACCATCATGCGAGTCACGTTCGCTTACGGCGTGCAACAAGAGCGGTTAGCGTCT GGATTCTTTTTAGAGATGTATACGAAAGGACGGTCCGAGGACTATTTGAAAGTCGCCACCGATATGGAAGCGGCTCTCGG TATCACCTACTCGATGGCGGAACGTGTCTGGTTCGCGGAAGAGGCGAATCGTCTGCGCTCGATTAAAGATCAAATGAAAG AAGATGAAGAAGAACGCTGGATCATGCAGATTCGGGTGCATAAACTGATTCATCACGTCTCGCTCATCTACGGGTTCACC TTTACGGATGACACGGCTCTCGAACGAGGACTGCTTGCTCACATCCTCTCGAGTATGAATACGCAGGTTTTGCCGGAGAC GAGTACGGTCAAGCCTCATATCGACCGCGACTATCCGGGGCTTCGTTCGGCCATTCAACAGGCCGCCGACATCGTCTTTG GAACGAATACGTTCTCCGAAGAAGAGACGGTCTTTTGGGCGATGCACTTTGCGGCAGCACTCGTCAAACCGGTGCGCCGT CGTGAATATCGGGCGCTCGTCGTCTGTTCGGCCGGACTTGGTTCGTCGAAGATGCTCGTCAATCGAGTACGTCAAGAGTT CCCGGAGATGCAAGACGTCGTCAACTCATCACTTTTTGGACTCGAACAGCACCGACTAGAAGAATATGATGTCATCTTGT CGACCGTACCGCTGCCACCCCTTTCGGTGCCGACACTAATCGTCAACCCGCTTTTGACGAGTGAAGAAGTGCAGCGCGTC CGTCATCTCTTACTGTCATTACCGCAATCCTTTCAAACACTCGCGACGAAGCCGCGTTCAACGATGCTTGATTTCACAGA ACTCGGGGAATTGGTCGAGACGTTCGAGCGGATGGATGACAAGTTCGATTTGGTCACGCTCAATAATACGGATCGTTTAG AAGATATCTTGCTTGATATCGGTACACATTTAGAAGAACGTGACCTCGTACAAAGCGGGATTCAGCTCTCTGCCCAACTG CTTCGTCGTCACGAAGTCGCGGGTCTTGGGGTGCCGGGTACGAAACTGGCGTTATTCCACGGGCGACATGCCTCGATTGA GAAGGCGAGTGTGTTTGCGTTTGATTTAACGACATCGATCCCACTCCTGATGATGGATCAGTCGACCGAACCCGTGACAC GTCTGCTTGTCTTGCTTGCACCGGAAGAAGCACGTGACGTCGAACTTCAATTCTTAAGCGCAATCAGCGGGTCGCTCATT GAGAGTGAGGAGCACATGCGTCTTTATAGCACGGGAACGAAAGAAGACCTTCGTTTACTTTTGCACGAATGTATGAAAAA AATGATTCATGAGACATTGTACGAAAAATGA
Upstream 100 bases:
>100_bases GCGACCGTGGTCACCCATCCGACCGCACGTGTCCGGTCAGTCCGACAACTCCTGTCGCTCGAGGAATACCGACTACTTGT CGAAGAATGGATGGATGAGC
Downstream 100 bases:
>100_bases CCGAACCATGGTCATTTTTTTGTTTGGCACAAAATGTTGCCAAAGTGTGAACTGGATTGAATTGAGAAAGCGCTTACTCC GAGCATACAATATGGGTGTA
Product: transcriptional antiterminator, BglG
Products: NA
Alternate protein names: Mannitol operon transcriptional activator; Mtl operon transcriptional activator; Putative phosphotransferase enzyme IIB component; Putative PTS system EIIB component; Putative phosphotransferase enzyme IIA component; Putative PTS system EIIA component [H]
Number of amino acids: Translated: 676; Mature: 676
Protein sequence:
>676_residues MRHEWTARERSILLHLLATETSTPLAEIAQAVNLSERTIQRERQLLEGILKEFELELAWQRGHGLSLVGKPSAKQQLRED LILSAEAIPTSEDRLFELAWRLLFENDTLKLQAVAKQMHVSPSTLTQDLEKLDRWFEEYHLEVERKKGVGARVLGYESEK RKLLINALLAHWDTLAFYRFVRGEDDYIPAFLKTVPCEEMLEGLRDGYDYLKSRAFERMDDRTIMRVTFAYGVQQERLAS GFFLEMYTKGRSEDYLKVATDMEAALGITYSMAERVWFAEEANRLRSIKDQMKEDEEERWIMQIRVHKLIHHVSLIYGFT FTDDTALERGLLAHILSSMNTQVLPETSTVKPHIDRDYPGLRSAIQQAADIVFGTNTFSEEETVFWAMHFAAALVKPVRR REYRALVVCSAGLGSSKMLVNRVRQEFPEMQDVVNSSLFGLEQHRLEEYDVILSTVPLPPLSVPTLIVNPLLTSEEVQRV RHLLLSLPQSFQTLATKPRSTMLDFTELGELVETFERMDDKFDLVTLNNTDRLEDILLDIGTHLEERDLVQSGIQLSAQL LRRHEVAGLGVPGTKLALFHGRHASIEKASVFAFDLTTSIPLLMMDQSTEPVTRLLVLLAPEEARDVELQFLSAISGSLI ESEEHMRLYSTGTKEDLRLLLHECMKKMIHETLYEK
Sequences:
>Translated_676_residues MRHEWTARERSILLHLLATETSTPLAEIAQAVNLSERTIQRERQLLEGILKEFELELAWQRGHGLSLVGKPSAKQQLRED LILSAEAIPTSEDRLFELAWRLLFENDTLKLQAVAKQMHVSPSTLTQDLEKLDRWFEEYHLEVERKKGVGARVLGYESEK RKLLINALLAHWDTLAFYRFVRGEDDYIPAFLKTVPCEEMLEGLRDGYDYLKSRAFERMDDRTIMRVTFAYGVQQERLAS GFFLEMYTKGRSEDYLKVATDMEAALGITYSMAERVWFAEEANRLRSIKDQMKEDEEERWIMQIRVHKLIHHVSLIYGFT FTDDTALERGLLAHILSSMNTQVLPETSTVKPHIDRDYPGLRSAIQQAADIVFGTNTFSEEETVFWAMHFAAALVKPVRR REYRALVVCSAGLGSSKMLVNRVRQEFPEMQDVVNSSLFGLEQHRLEEYDVILSTVPLPPLSVPTLIVNPLLTSEEVQRV RHLLLSLPQSFQTLATKPRSTMLDFTELGELVETFERMDDKFDLVTLNNTDRLEDILLDIGTHLEERDLVQSGIQLSAQL LRRHEVAGLGVPGTKLALFHGRHASIEKASVFAFDLTTSIPLLMMDQSTEPVTRLLVLLAPEEARDVELQFLSAISGSLI ESEEHMRLYSTGTKEDLRLLLHECMKKMIHETLYEK >Mature_676_residues MRHEWTARERSILLHLLATETSTPLAEIAQAVNLSERTIQRERQLLEGILKEFELELAWQRGHGLSLVGKPSAKQQLRED LILSAEAIPTSEDRLFELAWRLLFENDTLKLQAVAKQMHVSPSTLTQDLEKLDRWFEEYHLEVERKKGVGARVLGYESEK RKLLINALLAHWDTLAFYRFVRGEDDYIPAFLKTVPCEEMLEGLRDGYDYLKSRAFERMDDRTIMRVTFAYGVQQERLAS GFFLEMYTKGRSEDYLKVATDMEAALGITYSMAERVWFAEEANRLRSIKDQMKEDEEERWIMQIRVHKLIHHVSLIYGFT FTDDTALERGLLAHILSSMNTQVLPETSTVKPHIDRDYPGLRSAIQQAADIVFGTNTFSEEETVFWAMHFAAALVKPVRR REYRALVVCSAGLGSSKMLVNRVRQEFPEMQDVVNSSLFGLEQHRLEEYDVILSTVPLPPLSVPTLIVNPLLTSEEVQRV RHLLLSLPQSFQTLATKPRSTMLDFTELGELVETFERMDDKFDLVTLNNTDRLEDILLDIGTHLEERDLVQSGIQLSAQL LRRHEVAGLGVPGTKLALFHGRHASIEKASVFAFDLTTSIPLLMMDQSTEPVTRLLVLLAPEEARDVELQFLSAISGSLI ESEEHMRLYSTGTKEDLRLLLHECMKKMIHETLYEK
Specific function: Positively regulates the expression of the mtlAFD operon involved in the uptake and catabolism of mannitol [H]
COG id: COG3711
COG function: function code K; Transcriptional antiterminator
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Contains 1 PTS EIIB type-2 domain [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR013196 - InterPro: IPR007737 - InterPro: IPR011608 - InterPro: IPR016152 - InterPro: IPR002178 - InterPro: IPR013011 - InterPro: IPR003501 - InterPro: IPR011991 [H]
Pfam domain/function: PF08279 HTH_11; PF05043 Mga; PF00874 PRD; PF02302 PTS_IIB [H]
EC number: =2.7.1.69 [H]
Molecular weight: Translated: 77679; Mature: 77679
Theoretical pI: Translated: 5.20; Mature: 5.20
Prosite motif: PS51094 PTS_EIIA_TYPE_2 ; PS51099 PTS_EIIB_TYPE_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 3.1 %Met (Translated Protein) 3.6 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 3.1 %Met (Mature Protein) 3.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRHEWTARERSILLHLLATETSTPLAEIAQAVNLSERTIQRERQLLEGILKEFELELAWQ CCCCCCHHHHHHHHHHHHCCCCCCHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHEE RGHGLSLVGKPSAKQQLREDLILSAEAIPTSEDRLFELAWRLLFENDTLKLQAVAKQMHV CCCCCEEECCCCHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHCC SPSTLTQDLEKLDRWFEEYHLEVERKKGVGARVLGYESEKRKLLINALLAHWDTLAFYRF CHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEECCCHHHHHHHHHHHHHHHHHHHHHHH VRGEDDYIPAFLKTVPCEEMLEGLRDGYDYLKSRAFERMDDRTIMRVTFAYGVQQERLAS HCCCCCHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEHHHHCCCHHHHHC GFFLEMYTKGRSEDYLKVATDMEAALGITYSMAERVWFAEEANRLRSIKDQMKEDEEERW CHHHEEHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHH IMQIRVHKLIHHVSLIYGFTFTDDTALERGLLAHILSSMNTQVLPETSTVKPHIDRDYPG HHHHHHHHHHHHHHHHHEEECCCHHHHHHHHHHHHHHHCCCEECCCCCCCCCCCCCCCCH LRSAIQQAADIVFGTNTFSEEETVFWAMHFAAALVKPVRRREYRALVVCSAGLGSSKMLV HHHHHHHHHHEEECCCCCCCCHHHHHHHHHHHHHHHHHHHCCCEEEEEEECCCCCHHHHH NRVRQEFPEMQDVVNSSLFGLEQHRLEEYDVILSTVPLPPLSVPTLIVNPLLTSEEVQRV HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHCCCCCHHHHHHH RHLLLSLPQSFQTLATKPRSTMLDFTELGELVETFERMDDKFDLVTLNNTDRLEDILLDI HHHHHHCCHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCCCEEEEEECCCHHHHHHHHHH GTHLEERDLVQSGIQLSAQLLRRHEVAGLGVPGTKLALFHGRHASIEKASVFAFDLTTSI HCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEEECCCCCCCHHHEEEEECCCCC PLLMMDQSTEPVTRLLVLLAPEEARDVELQFLSAISGSLIESEEHMRLYSTGTKEDLRLL CEEEECCCCCHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHCCHHHHEEECCCCHHHHHHH LHECMKKMIHETLYEK HHHHHHHHHHHHHCCC >Mature Secondary Structure MRHEWTARERSILLHLLATETSTPLAEIAQAVNLSERTIQRERQLLEGILKEFELELAWQ CCCCCCHHHHHHHHHHHHCCCCCCHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHEE RGHGLSLVGKPSAKQQLREDLILSAEAIPTSEDRLFELAWRLLFENDTLKLQAVAKQMHV CCCCCEEECCCCHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHCC SPSTLTQDLEKLDRWFEEYHLEVERKKGVGARVLGYESEKRKLLINALLAHWDTLAFYRF CHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEECCCHHHHHHHHHHHHHHHHHHHHHHH VRGEDDYIPAFLKTVPCEEMLEGLRDGYDYLKSRAFERMDDRTIMRVTFAYGVQQERLAS HCCCCCHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEHHHHCCCHHHHHC GFFLEMYTKGRSEDYLKVATDMEAALGITYSMAERVWFAEEANRLRSIKDQMKEDEEERW CHHHEEHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHH IMQIRVHKLIHHVSLIYGFTFTDDTALERGLLAHILSSMNTQVLPETSTVKPHIDRDYPG HHHHHHHHHHHHHHHHHEEECCCHHHHHHHHHHHHHHHCCCEECCCCCCCCCCCCCCCCH LRSAIQQAADIVFGTNTFSEEETVFWAMHFAAALVKPVRRREYRALVVCSAGLGSSKMLV HHHHHHHHHHEEECCCCCCCCHHHHHHHHHHHHHHHHHHHCCCEEEEEEECCCCCHHHHH NRVRQEFPEMQDVVNSSLFGLEQHRLEEYDVILSTVPLPPLSVPTLIVNPLLTSEEVQRV HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHCCCCCHHHHHHH RHLLLSLPQSFQTLATKPRSTMLDFTELGELVETFERMDDKFDLVTLNNTDRLEDILLDI HHHHHHCCHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCCCEEEEEECCCHHHHHHHHHH GTHLEERDLVQSGIQLSAQLLRRHEVAGLGVPGTKLALFHGRHASIEKASVFAFDLTTSI HCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEEECCCCCCCHHHEEEEECCCCC PLLMMDQSTEPVTRLLVLLAPEEARDVELQFLSAISGSLIESEEHMRLYSTGTKEDLRLL CEEEECCCCCHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHCCHHHHEEECCCCHHHHHHH LHECMKKMIHETLYEK HHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 9384377 [H]