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The map label for this gene is ybhR [C]

Identifier: 229917894

GI number: 229917894

Start: 2108740

End: 2109753

Strand: Direct

Name: ybhR [C]

Synonym: EAT1b_2172

Alternate gene names: 229917894

Gene position: 2108740-2109753 (Clockwise)

Preceding gene: 229917893

Following gene: 229917896

Centisome position: 70.29

GC content: 49.9

Gene sequence:

>1014_bases
ATGCGTAACTTAGCAAAGCGTGTCATCTTTCAGACGTTGAATGATAAACGAAGCGTCGCCTTGATTTTGATTGCGCCACT
TCTTATTTTGACACTCGTCTACTTCTTACTCGGGGACTCGGATTACGTGCCGACTGTCGTCCTGGACGACAGTGCACCCG
AACAGCTCGTCAATGCGTTTGAAGATGAGACGCTCGAAGTGGAACAGGCATCGTTCGATGATCCAAAAGTATATATCGAA
GACAATGAACATGTCGATGCCGTGTTTGAAATGAATCAAGAAGGAACGACCATCACGTTACGCGAACCTTCGACGAAGTC
GTCGAAGGCGGTTGGTGAGATTCAAGATGCGTTGACGACGCTCAATCCCGCAGCCGAGATCGATACGTCATTCGTCTATG
GGAAAGAAGGACAGTCGACGTTCGATTCGTTCGGGTTTGTCTTCCTATCCCTCTTCTCGTTCTTCTTCGTGTTCATCCTA
TCGGCGATGGCACTCGTCAAAGAACGGAGTGGCGGTACGCTCGAACGACTGTTGATGACTCCGATCAAGCGAGGGCAAGT
CATTTTAGGATATACACTCGGGTACGGGACGTTTGCGGTCGTCCAGTCGATTTTCATCGTGCTCTATTCGATTTATGTGC
TAGGTCTGTCTTCGCTCGGGAATATGGCGTGGGTCATGTTGACGATGCTACTCATGGCGGGTACGGCGGTGCTCTTCGGG
GCGACCATCTCGGTGTTTGCCCGATCGGAACTACAAGTCGTACAGATGATTCCGTTCACTATCATCCCGCAAGTGTTCTT
CTCGGGACTCATCCCGCTCGACTTGATTCCATACGGTCTCGGGAACTTGAGTTACGTCATGCCAATCTTCTACGGAGCGA
CAGCGATCAAGGAAGTCATGATTTACGGAAGTGGCTTCTCAGGCATCTGGATGTATTTACTCGGTTTGATTCTCTATGCA
GGTGTCTTGTACCTCTTGAATATGCGGGCGCTCGGGAAATACAGAGGACACTAA

Upstream 100 bases:

>100_bases
TTGATCGCCTATGACCATGTGCAAGATTTGCTCGACCAGACCGAGAACGGTCGCGTCGAAGAACTGTTCTTGATTGCTGG
GAAAGAGGAGGTGGGTGACC

Downstream 100 bases:

>100_bases
GTTAAAAGGACAACACCCAGTCTTGAAACTGTTGAAACGCCGGGATTTGATTGGCCAGTCCGATGACGAGAAACCAAGCA
CCCGTATAGAAAAATGCAGA

Product: ABC transporter

Products: NA

Alternate protein names: ABC Transporter Permease Protein; ABC-Type Multidrug Transport System Permease Component; ABC Transporter; ABC Transporter Permease; Multidrug ABC Transporter Inner Membrane Protein; Multidrug ABC Transporter Permease; DrrB Family ABC Transporter; ABC Transporter Permease Component; Abc-2 Type Transporter; Abc-2 Type Transporter Integral Membrane Subunit; Multidrug Resistance ABC Transporter Permease; ABC-Type Multidrug Transport System; Export ABC Transporter Permease; ABC Efflux Pump Inner Membrane Subunit; ABC-2 Type Transporter Family; ABC Transporter Efflux Protein DrrB Family Protein; Antibiotic Resistance ABC Transporter Efflux Protein; Antibiotic Transport System Permease; ABC Multidrug Efflux Pump Inner Membrane Subunit; DrrB Family ABC Transporter Efflux Protein; ABC Transporter Subunit; ABC Drug Efflux Pump Inner Membrane Subunit DrrB Family; ABC Transporter ATPase And Permease Components; Integral Membrane Protein; Drug Efflux ABC Transporter Inner Membrane Protein; ABC-Type Transporter Permease Component; Multidrug ABC Transporter Permease Component; Transmembrane Protein; ABC-Type Multidrug Transport System Protein

Number of amino acids: Translated: 337; Mature: 337

Protein sequence:

>337_residues
MRNLAKRVIFQTLNDKRSVALILIAPLLILTLVYFLLGDSDYVPTVVLDDSAPEQLVNAFEDETLEVEQASFDDPKVYIE
DNEHVDAVFEMNQEGTTITLREPSTKSSKAVGEIQDALTTLNPAAEIDTSFVYGKEGQSTFDSFGFVFLSLFSFFFVFIL
SAMALVKERSGGTLERLLMTPIKRGQVILGYTLGYGTFAVVQSIFIVLYSIYVLGLSSLGNMAWVMLTMLLMAGTAVLFG
ATISVFARSELQVVQMIPFTIIPQVFFSGLIPLDLIPYGLGNLSYVMPIFYGATAIKEVMIYGSGFSGIWMYLLGLILYA
GVLYLLNMRALGKYRGH

Sequences:

>Translated_337_residues
MRNLAKRVIFQTLNDKRSVALILIAPLLILTLVYFLLGDSDYVPTVVLDDSAPEQLVNAFEDETLEVEQASFDDPKVYIE
DNEHVDAVFEMNQEGTTITLREPSTKSSKAVGEIQDALTTLNPAAEIDTSFVYGKEGQSTFDSFGFVFLSLFSFFFVFIL
SAMALVKERSGGTLERLLMTPIKRGQVILGYTLGYGTFAVVQSIFIVLYSIYVLGLSSLGNMAWVMLTMLLMAGTAVLFG
ATISVFARSELQVVQMIPFTIIPQVFFSGLIPLDLIPYGLGNLSYVMPIFYGATAIKEVMIYGSGFSGIWMYLLGLILYA
GVLYLLNMRALGKYRGH
>Mature_337_residues
MRNLAKRVIFQTLNDKRSVALILIAPLLILTLVYFLLGDSDYVPTVVLDDSAPEQLVNAFEDETLEVEQASFDDPKVYIE
DNEHVDAVFEMNQEGTTITLREPSTKSSKAVGEIQDALTTLNPAAEIDTSFVYGKEGQSTFDSFGFVFLSLFSFFFVFIL
SAMALVKERSGGTLERLLMTPIKRGQVILGYTLGYGTFAVVQSIFIVLYSIYVLGLSSLGNMAWVMLTMLLMAGTAVLFG
ATISVFARSELQVVQMIPFTIIPQVFFSGLIPLDLIPYGLGNLSYVMPIFYGATAIKEVMIYGSGFSGIWMYLLGLILYA
GVLYLLNMRALGKYRGH

Specific function: Unknown

COG id: COG0842

COG function: function code V; ABC-type multidrug transport system, permease component

Gene ontology:

Cell location: Integral Membrane Protein [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI1787010, Length=163, Percent_Identity=23.9263803680982, Blast_Score=63, Evalue=2e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 37275; Mature: 37275

Theoretical pI: Translated: 4.41; Mature: 4.41

Prosite motif: PS51012 ABC_TM2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
3.9 %Met     (Translated Protein)
3.9 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
3.9 %Met     (Mature Protein)
3.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRNLAKRVIFQTLNDKRSVALILIAPLLILTLVYFLLGDSDYVPTVVLDDSAPEQLVNAF
CCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEECCCCHHHHHHHH
EDETLEVEQASFDDPKVYIEDNEHVDAVFEMNQEGTTITLREPSTKSSKAVGEIQDALTT
CCCCEEEHHCCCCCCEEEECCCCCEEHHEEECCCCCEEEEECCCCCCHHHHHHHHHHHHH
LNPAAEIDTSFVYGKEGQSTFDSFGFVFLSLFSFFFVFILSAMALVKERSGGTLERLLMT
CCCHHHCCCCEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHH
PIKRGQVILGYTLGYGTFAVVQSIFIVLYSIYVLGLSSLGNMAWVMLTMLLMAGTAVLFG
HHCCCCEEEEEEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
ATISVFARSELQVVQMIPFTIIPQVFFSGLIPLDLIPYGLGNLSYVMPIFYGATAIKEVM
HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHCCCCCHHHHHHHHHHHHHHHHHHH
IYGSGFSGIWMYLLGLILYAGVLYLLNMRALGKYRGH
HCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
>Mature Secondary Structure
MRNLAKRVIFQTLNDKRSVALILIAPLLILTLVYFLLGDSDYVPTVVLDDSAPEQLVNAF
CCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEECCCCHHHHHHHH
EDETLEVEQASFDDPKVYIEDNEHVDAVFEMNQEGTTITLREPSTKSSKAVGEIQDALTT
CCCCEEEHHCCCCCCEEEECCCCCEEHHEEECCCCCEEEEECCCCCCHHHHHHHHHHHHH
LNPAAEIDTSFVYGKEGQSTFDSFGFVFLSLFSFFFVFILSAMALVKERSGGTLERLLMT
CCCHHHCCCCEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHH
PIKRGQVILGYTLGYGTFAVVQSIFIVLYSIYVLGLSSLGNMAWVMLTMLLMAGTAVLFG
HHCCCCEEEEEEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
ATISVFARSELQVVQMIPFTIIPQVFFSGLIPLDLIPYGLGNLSYVMPIFYGATAIKEVM
HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHCCCCCHHHHHHHHHHHHHHHHHHH
IYGSGFSGIWMYLLGLILYAGVLYLLNMRALGKYRGH
HCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: NA