| Definition | Exiguobacterium sp. AT1b, complete genome. |
|---|---|
| Accession | NC_012673 |
| Length | 2,999,895 |
Click here to switch to the map view.
The map label for this gene is 229917847
Identifier: 229917847
GI number: 229917847
Start: 2074420
End: 2076312
Strand: Direct
Name: 229917847
Synonym: EAT1b_2125
Alternate gene names: NA
Gene position: 2074420-2076312 (Clockwise)
Preceding gene: 229917846
Following gene: 229917849
Centisome position: 69.15
GC content: 38.03
Gene sequence:
>1893_bases ATGATTATTTATAACGAACCCAAGTACATGTTTGTAGAGCACATCTTAGAAAAAGAAATTAGTTATATCCTTAGTAAAAA CATCGAAGAAAAAATGAATCGGCGCGTTAGTGCTTCCGAGATGATTTCATGGGAAAACTCACTTTCAGAGATGATGCGGG TCATTCGAGGAGAATCGATACCTGATGACGTAAATATTCTTCTTGAGTTTAATTTACCATCAACTCAAAAACGAATTGAT TTCATTATTGCGGGGAAAGATAAGGATGGTCAAAAGAATGCAATTATTATCGAACTAAAGCAATGGACGAAAGCTGATCT CGCTGACGGAGATGGTATCGTCCAAACCGCATTTTACGGAAGAACCCAATCGACAGTTCATCCTTCTTATCAAGCCTTAT CGTACCGCCGATACTTGGAAAATTATCTTGAATCGGTAGATCCAATCGAGTCTGATATAACACTTGATTCATGCGCTTAT TTACATAATTATATTCGATCAAGGAAACATGAAAATGAACCTTTATTGAATGATCGATACAGCCATTATTACAAGGAAGC ACCGATTTATTTCAAAATGGACGACCTTCATTTAGCGGATTATGTAACGAAACGAGTCGGTGCCGGTCAAGGGTCAGAAA TCGCTTCAGAAATTGAGACAGGAAAATTGAGACCTTCCAAAAAATTGGTAGAAACATTAAATCTAATGTTTGAGGGGAAC GAAGAGTTCATTTTGTTAGATGAACAGAAAGTTGCCTATGAACAGATTTTAACGATTTATACTGAGCATGTGTTACATAG GGACGAGAAGCATGTTGTATTAATTAAAGGTGGACCGGGGACTGGGAAATCCGTAATCGGTTTGAATGCTCTAAAGGCAC TCATGAATGAGCAGGCATTAGTCGAGTATATTACGCCGAATGCAGCTTTCCGAGAAGTCTTACGAAAAAAGCTGGCAAGA CAAAAGAGCATGATTGAAATTCGAGATATGTTTAAAGGTTCCGGTTCTTACGTAGATACTCAAATGAATAAAATTGACGT ATTAGTTTGTGATGAGGCGCACCGATTAAAAAATCATGGACATATGCAACGAAAAATTGAAGGAGAGAATCAAGCGACTC AAATTATTCGGAGTGCGAAAATGAGTGTTTTCTTTATTGATGATGAGCAAATGATTTCGAAGAAAGATATTGGGTCCTAT TCATTGATTAAAGAGGAAGCCAATAAGCAAAATGCTATTATTCACGAATTAACATTGGATTCTCAATTTCGATGTGGTGG ATCAGGTAACTATATTGAATGGATAAATAGATTTTTTAATAATGAAGAGGAAATTGAATTAGACGGATCATATGACATTC AAGTATTAGACTCACCACAGCAATTGATTGACGAAGTTGTGTCAAAACGTGACGGTCGCGTTACGGCTGGGTATGCATGG AGTTGGACGAAAGAACGATTAAACGGACAGCTTGTTGCAGATGTACAGATTCCTGAGCATGATTTCGCAATGCCTTGGAA TGATTCAAAACGTTTAGACTGGGCTATTCATCAAGATGGACGTGAACAGATTGGATGCATCCATACAGTACAAGGCTTAG AAATGACTTATGCAGGTGTAATCATCGGTCCTGATTTAGGTTATGATCCACAATCAAGACAATTGATTGTACGGCGGGAA GAATTCAAAGATAGTGGGGCTAGACCGGCAAAACCGAAGAAGAATGAAGTGGACGCTCTTGAGCGTCTCGTGAAAAATAC GTATCGCACATTAATGACTCGGGGGATGAAGGGGTGTTATGTGTATTGTTGTAATCCTGAACTTCAAAAGTATTTTAAGC AGCGGATAGCTTTTACGAGTAATGAATATGAAAATGTAACTAGAGAAGTTTGA
Upstream 100 bases:
>100_bases TGTCCAAATTGCCATGCGATGCTACATCGAAAAGAAGGTGGCGAGTACTTAACGATTGAACAGTTGAAAAATAGAATAAA ATCTAACCCTGGAGGAAATC
Downstream 100 bases:
>100_bases CTCTAGTTACATTTTTCTTTCGGTTAAAAAGTTAGAATGAGCAATCAAGTAGACGTGGACAGGTTTTGATAATGACTCAA ACGTCTCACTATCAATATTA
Product: ATPase AAA
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 630; Mature: 630
Protein sequence:
>630_residues MIIYNEPKYMFVEHILEKEISYILSKNIEEKMNRRVSASEMISWENSLSEMMRVIRGESIPDDVNILLEFNLPSTQKRID FIIAGKDKDGQKNAIIIELKQWTKADLADGDGIVQTAFYGRTQSTVHPSYQALSYRRYLENYLESVDPIESDITLDSCAY LHNYIRSRKHENEPLLNDRYSHYYKEAPIYFKMDDLHLADYVTKRVGAGQGSEIASEIETGKLRPSKKLVETLNLMFEGN EEFILLDEQKVAYEQILTIYTEHVLHRDEKHVVLIKGGPGTGKSVIGLNALKALMNEQALVEYITPNAAFREVLRKKLAR QKSMIEIRDMFKGSGSYVDTQMNKIDVLVCDEAHRLKNHGHMQRKIEGENQATQIIRSAKMSVFFIDDEQMISKKDIGSY SLIKEEANKQNAIIHELTLDSQFRCGGSGNYIEWINRFFNNEEEIELDGSYDIQVLDSPQQLIDEVVSKRDGRVTAGYAW SWTKERLNGQLVADVQIPEHDFAMPWNDSKRLDWAIHQDGREQIGCIHTVQGLEMTYAGVIIGPDLGYDPQSRQLIVRRE EFKDSGARPAKPKKNEVDALERLVKNTYRTLMTRGMKGCYVYCCNPELQKYFKQRIAFTSNEYENVTREV
Sequences:
>Translated_630_residues MIIYNEPKYMFVEHILEKEISYILSKNIEEKMNRRVSASEMISWENSLSEMMRVIRGESIPDDVNILLEFNLPSTQKRID FIIAGKDKDGQKNAIIIELKQWTKADLADGDGIVQTAFYGRTQSTVHPSYQALSYRRYLENYLESVDPIESDITLDSCAY LHNYIRSRKHENEPLLNDRYSHYYKEAPIYFKMDDLHLADYVTKRVGAGQGSEIASEIETGKLRPSKKLVETLNLMFEGN EEFILLDEQKVAYEQILTIYTEHVLHRDEKHVVLIKGGPGTGKSVIGLNALKALMNEQALVEYITPNAAFREVLRKKLAR QKSMIEIRDMFKGSGSYVDTQMNKIDVLVCDEAHRLKNHGHMQRKIEGENQATQIIRSAKMSVFFIDDEQMISKKDIGSY SLIKEEANKQNAIIHELTLDSQFRCGGSGNYIEWINRFFNNEEEIELDGSYDIQVLDSPQQLIDEVVSKRDGRVTAGYAW SWTKERLNGQLVADVQIPEHDFAMPWNDSKRLDWAIHQDGREQIGCIHTVQGLEMTYAGVIIGPDLGYDPQSRQLIVRRE EFKDSGARPAKPKKNEVDALERLVKNTYRTLMTRGMKGCYVYCCNPELQKYFKQRIAFTSNEYENVTREV >Mature_630_residues MIIYNEPKYMFVEHILEKEISYILSKNIEEKMNRRVSASEMISWENSLSEMMRVIRGESIPDDVNILLEFNLPSTQKRID FIIAGKDKDGQKNAIIIELKQWTKADLADGDGIVQTAFYGRTQSTVHPSYQALSYRRYLENYLESVDPIESDITLDSCAY LHNYIRSRKHENEPLLNDRYSHYYKEAPIYFKMDDLHLADYVTKRVGAGQGSEIASEIETGKLRPSKKLVETLNLMFEGN EEFILLDEQKVAYEQILTIYTEHVLHRDEKHVVLIKGGPGTGKSVIGLNALKALMNEQALVEYITPNAAFREVLRKKLAR QKSMIEIRDMFKGSGSYVDTQMNKIDVLVCDEAHRLKNHGHMQRKIEGENQATQIIRSAKMSVFFIDDEQMISKKDIGSY SLIKEEANKQNAIIHELTLDSQFRCGGSGNYIEWINRFFNNEEEIELDGSYDIQVLDSPQQLIDEVVSKRDGRVTAGYAW SWTKERLNGQLVADVQIPEHDFAMPWNDSKRLDWAIHQDGREQIGCIHTVQGLEMTYAGVIIGPDLGYDPQSRQLIVRRE EFKDSGARPAKPKKNEVDALERLVKNTYRTLMTRGMKGCYVYCCNPELQKYFKQRIAFTSNEYENVTREV
Specific function: Unknown
COG id: COG3410
COG function: function code S; Uncharacterized conserved protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
Organism=Saccharomyces cerevisiae, GI6325011, Length=432, Percent_Identity=24.537037037037, Blast_Score=102, Evalue=2e-22,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 72733; Mature: 72733
Theoretical pI: Translated: 5.79; Mature: 5.79
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 3.0 %Met (Translated Protein) 4.1 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 3.0 %Met (Mature Protein) 4.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MIIYNEPKYMFVEHILEKEISYILSKNIEEKMNRRVSASEMISWENSLSEMMRVIRGESI CEEECCCHHHHHHHHHHHHHHHHHHCCHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCCCC PDDVNILLEFNLPSTQKRIDFIIAGKDKDGQKNAIIIELKQWTKADLADGDGIVQTAFYG CCCEEEEEEECCCCCCCEEEEEEECCCCCCCCCEEEEEECCCCCCCCCCCCCEEEEEECC RTQSTVHPSYQALSYRRYLENYLESVDPIESDITLDSCAYLHNYIRSRKHENEPLLNDRY CCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCHH SHYYKEAPIYFKMDDLHLADYVTKRVGAGQGSEIASEIETGKLRPSKKLVETLNLMFEGN HHHHHCCCEEEEECCCHHHHHHHHHHCCCCCHHHHHHHHHCCCCCHHHHHHHHHHHEECC EEFILLDEQKVAYEQILTIYTEHVLHRDEKHVVLIKGGPGTGKSVIGLNALKALMNEQAL CCEEEECCHHHHHHHHHHHHHHHHHCCCCCEEEEEECCCCCCCCHHHHHHHHHHHCCHHH VEYITPNAAFREVLRKKLARQKSMIEIRDMFKGSGSYVDTQMNKIDVLVCDEAHRLKNHG HHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEECCCCEEEEEEECCHHHHHHCC HMQRKIEGENQATQIIRSAKMSVFFIDDEQMISKKDIGSYSLIKEEANKQNAIIHELTLD CHHHHCCCCHHHHHHHHHCCCEEEEECCHHHHHHHCCCCHHHHHHHCCCCCCEEEEEECC SQFRCGGSGNYIEWINRFFNNEEEIELDGSYDIQVLDSPQQLIDEVVSKRDGRVTAGYAW CCCCCCCCCCHHHHHHHHHCCCCEEEECCCEEEEEECCHHHHHHHHHHCCCCCEEEEEEE SWTKERLNGQLVADVQIPEHDFAMPWNDSKRLDWAIHQDGREQIGCIHTVQGLEMTYAGV CCHHHHCCCEEEEEEECCCCCCCCCCCCCCCEEEEECCCCHHHHCHHHHHCCCEEEEEEE IIGPDLGYDPQSRQLIVRREEFKDSGARPAKPKKNEVDALERLVKNTYRTLMTRGMKGCY EECCCCCCCCCCCCEEEEHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCEE VYCCNPELQKYFKQRIAFTSNEYENVTREV EEECCHHHHHHHHHHHCCCCCHHHHHHCCC >Mature Secondary Structure MIIYNEPKYMFVEHILEKEISYILSKNIEEKMNRRVSASEMISWENSLSEMMRVIRGESI CEEECCCHHHHHHHHHHHHHHHHHHCCHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCCCC PDDVNILLEFNLPSTQKRIDFIIAGKDKDGQKNAIIIELKQWTKADLADGDGIVQTAFYG CCCEEEEEEECCCCCCCEEEEEEECCCCCCCCCEEEEEECCCCCCCCCCCCCEEEEEECC RTQSTVHPSYQALSYRRYLENYLESVDPIESDITLDSCAYLHNYIRSRKHENEPLLNDRY CCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCHH SHYYKEAPIYFKMDDLHLADYVTKRVGAGQGSEIASEIETGKLRPSKKLVETLNLMFEGN HHHHHCCCEEEEECCCHHHHHHHHHHCCCCCHHHHHHHHHCCCCCHHHHHHHHHHHEECC EEFILLDEQKVAYEQILTIYTEHVLHRDEKHVVLIKGGPGTGKSVIGLNALKALMNEQAL CCEEEECCHHHHHHHHHHHHHHHHHCCCCCEEEEEECCCCCCCCHHHHHHHHHHHCCHHH VEYITPNAAFREVLRKKLARQKSMIEIRDMFKGSGSYVDTQMNKIDVLVCDEAHRLKNHG HHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEECCCCEEEEEEECCHHHHHHCC HMQRKIEGENQATQIIRSAKMSVFFIDDEQMISKKDIGSYSLIKEEANKQNAIIHELTLD CHHHHCCCCHHHHHHHHHCCCEEEEECCHHHHHHHCCCCHHHHHHHCCCCCCEEEEEECC SQFRCGGSGNYIEWINRFFNNEEEIELDGSYDIQVLDSPQQLIDEVVSKRDGRVTAGYAW CCCCCCCCCCHHHHHHHHHCCCCEEEECCCEEEEEECCHHHHHHHHHHCCCCCEEEEEEE SWTKERLNGQLVADVQIPEHDFAMPWNDSKRLDWAIHQDGREQIGCIHTVQGLEMTYAGV CCHHHHCCCEEEEEEECCCCCCCCCCCCCCCEEEEECCCCHHHHCHHHHHCCCEEEEEEE IIGPDLGYDPQSRQLIVRREEFKDSGARPAKPKKNEVDALERLVKNTYRTLMTRGMKGCY EECCCCCCCCCCCCEEEEHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCEE VYCCNPELQKYFKQRIAFTSNEYENVTREV EEECCHHHHHHHHHHHCCCCCHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA