| Definition | Exiguobacterium sp. AT1b, complete genome. |
|---|---|
| Accession | NC_012673 |
| Length | 2,999,895 |
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The map label for this gene is 229917720
Identifier: 229917720
GI number: 229917720
Start: 1952011
End: 1953081
Strand: Direct
Name: 229917720
Synonym: EAT1b_1997
Alternate gene names: NA
Gene position: 1952011-1953081 (Clockwise)
Preceding gene: 229917719
Following gene: 229917721
Centisome position: 65.07
GC content: 50.42
Gene sequence:
>1071_bases GTGATTGAACGGTTGTTTTGGGAGTCGCGAGGCATCACCATTCAAGAAGTCGTCTACTTGGAGATGATCTATGCGCTCAT CATCGTCTTGTTCGAGGTGCCGACCGGCGTGTGGGCGGACCGAACGACACGGCGTCGGCTGATCCAGGCAGGTGTAGCCT TAGAGTGGTTATCGTTTTGGATCTTGTTATACTCGTTCACCTTCAGCGGATTTTTTGTCGCCATCAGCTGTTCGGCCGTT GGGTCGGTCATTCGAAGTGGGGCGGAGAATGCGCTGCTATACGAGTCCTTACAAGAAAGTCATGAAGCGTCGTCGTTCGA ACGGGTTCTTGGAAAACTGAACGCGATTGGGATTATGGCCGCTGTGACGGCGGCATGGAGTGGCAGTATGTTGGCTCAGT ACCTTCCATTGGAGTGGAACTACAGACTTTCCATTCTCAGTTTATTGATGGCGACCGTGTGTAGCTTATTTCTCGTTGAA CCCGTTCATGGCGAAGGAGAAGACCGATTGACGTGGCGGCACTTGTTGAAAGGATTTCAATTTGTGTGGTCGCACACATC CCTTCGTAACGTCACCATCGGATTTTTGGCAGCCGTGTCCGCATTCAATTTCATCGATGAGTTCTGGCAACTGTATGCAC GTGATGTATCCATCCCAATCTATTGGTTCGGTGCCATTTCAAGCGTCCTGCTTTTGATTCAGTTACCTGGTCAACTTTTT GCGGGGACGCTTATACGATTTGCGTCATCCAAGCGTTGGTTAAACGGGTTCGGTTGGTTAATGGGCGGTGGATTTCTCAT CGTCGGGTTGTTCCCGAGTCCGATTGGAATCGGGGTGATGGGACTCCTAGCTCTATTGTATGGTGCGATGGAGCCACTCT ATTTTGGGCTCTTGCATCATCAGGTGCCTTCCGATATCCGAGCGACGACCGAATCATCTGTCTCGATGCTATGGCATCTC GGTATCCTTGTGTTGGGGTTTGTCTTTATTGTAGGAACGACAGCGTCGCTATTTTTGGCGTTCATCTTAATCGGGCTTGT CGTTTGGTTCGTTCATGCGACTATCCGCTAA
Upstream 100 bases:
>100_bases GATTTAAATGAAAAAACGAGCACGTTCACCGAGTTAAGTTCGTCGAAACATTGTTTGGTTAGGGTGGATTCGTTGGTTTG AAGGGCTGATTCCCGCATAC
Downstream 100 bases:
>100_bases TCTTTACAGACATGGGTCATAAGCCATGTCTGTTTTTACGTCTTAAGACGGACGAAAGATTGTGTCGAGAAGTGTATGAT GAGAACAATCTTGATGAATC
Product: major facilitator superfamily MFS_1
Products: NA
Alternate protein names: Multidrug Efflux Protein Variant; MFS Transporter; MFS Family Transporter; Transporter Facilitator Family; Facilitator Superfamily Permease; Permease Of Facilitator Superfamily
Number of amino acids: Translated: 356; Mature: 356
Protein sequence:
>356_residues MIERLFWESRGITIQEVVYLEMIYALIIVLFEVPTGVWADRTTRRRLIQAGVALEWLSFWILLYSFTFSGFFVAISCSAV GSVIRSGAENALLYESLQESHEASSFERVLGKLNAIGIMAAVTAAWSGSMLAQYLPLEWNYRLSILSLLMATVCSLFLVE PVHGEGEDRLTWRHLLKGFQFVWSHTSLRNVTIGFLAAVSAFNFIDEFWQLYARDVSIPIYWFGAISSVLLLIQLPGQLF AGTLIRFASSKRWLNGFGWLMGGGFLIVGLFPSPIGIGVMGLLALLYGAMEPLYFGLLHHQVPSDIRATTESSVSMLWHL GILVLGFVFIVGTTASLFLAFILIGLVVWFVHATIR
Sequences:
>Translated_356_residues MIERLFWESRGITIQEVVYLEMIYALIIVLFEVPTGVWADRTTRRRLIQAGVALEWLSFWILLYSFTFSGFFVAISCSAV GSVIRSGAENALLYESLQESHEASSFERVLGKLNAIGIMAAVTAAWSGSMLAQYLPLEWNYRLSILSLLMATVCSLFLVE PVHGEGEDRLTWRHLLKGFQFVWSHTSLRNVTIGFLAAVSAFNFIDEFWQLYARDVSIPIYWFGAISSVLLLIQLPGQLF AGTLIRFASSKRWLNGFGWLMGGGFLIVGLFPSPIGIGVMGLLALLYGAMEPLYFGLLHHQVPSDIRATTESSVSMLWHL GILVLGFVFIVGTTASLFLAFILIGLVVWFVHATIR >Mature_356_residues MIERLFWESRGITIQEVVYLEMIYALIIVLFEVPTGVWADRTTRRRLIQAGVALEWLSFWILLYSFTFSGFFVAISCSAV GSVIRSGAENALLYESLQESHEASSFERVLGKLNAIGIMAAVTAAWSGSMLAQYLPLEWNYRLSILSLLMATVCSLFLVE PVHGEGEDRLTWRHLLKGFQFVWSHTSLRNVTIGFLAAVSAFNFIDEFWQLYARDVSIPIYWFGAISSVLLLIQLPGQLF AGTLIRFASSKRWLNGFGWLMGGGFLIVGLFPSPIGIGVMGLLALLYGAMEPLYFGLLHHQVPSDIRATTESSVSMLWHL GILVLGFVFIVGTTASLFLAFILIGLVVWFVHATIR
Specific function: Unknown
COG id: COG0477
COG function: function code GEPR; Permeases of the major facilitator superfamily
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 39780; Mature: 39780
Theoretical pI: Translated: 6.72; Mature: 6.72
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 2.5 %Met (Translated Protein) 3.1 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 2.5 %Met (Mature Protein) 3.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MIERLFWESRGITIQEVVYLEMIYALIIVLFEVPTGVWADRTTRRRLIQAGVALEWLSFW CCCHHHHCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHH ILLYSFTFSGFFVAISCSAVGSVIRSGAENALLYESLQESHEASSFERVLGKLNAIGIMA HHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH AVTAAWSGSMLAQYLPLEWNYRLSILSLLMATVCSLFLVEPVHGEGEDRLTWRHLLKGFQ HHHHHHCHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHH FVWSHTSLRNVTIGFLAAVSAFNFIDEFWQLYARDVSIPIYWFGAISSVLLLIQLPGQLF HHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCHHHH AGTLIRFASSKRWLNGFGWLMGGGFLIVGLFPSPIGIGVMGLLALLYGAMEPLYFGLLHH HHHHHHHHHCCHHHHHHHHHHCCCEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHH QVPSDIRATTESSVSMLWHLGILVLGFVFIVGTTASLFLAFILIGLVVWFVHATIR HCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC >Mature Secondary Structure MIERLFWESRGITIQEVVYLEMIYALIIVLFEVPTGVWADRTTRRRLIQAGVALEWLSFW CCCHHHHCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHH ILLYSFTFSGFFVAISCSAVGSVIRSGAENALLYESLQESHEASSFERVLGKLNAIGIMA HHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH AVTAAWSGSMLAQYLPLEWNYRLSILSLLMATVCSLFLVEPVHGEGEDRLTWRHLLKGFQ HHHHHHCHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHH FVWSHTSLRNVTIGFLAAVSAFNFIDEFWQLYARDVSIPIYWFGAISSVLLLIQLPGQLF HHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCHHHH AGTLIRFASSKRWLNGFGWLMGGGFLIVGLFPSPIGIGVMGLLALLYGAMEPLYFGLLHH HHHHHHHHHCCHHHHHHHHHHCCCEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHH QVPSDIRATTESSVSMLWHLGILVLGFVFIVGTTASLFLAFILIGLVVWFVHATIR HCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA