| Definition | Exiguobacterium sp. AT1b, complete genome. |
|---|---|
| Accession | NC_012673 |
| Length | 2,999,895 |
Click here to switch to the map view.
The map label for this gene is 229917702
Identifier: 229917702
GI number: 229917702
Start: 1937054
End: 1937446
Strand: Direct
Name: 229917702
Synonym: EAT1b_1979
Alternate gene names: NA
Gene position: 1937054-1937446 (Clockwise)
Preceding gene: 229917701
Following gene: 229917704
Centisome position: 64.57
GC content: 49.87
Gene sequence:
>393_bases ATGAATCCATTGACAAAAAAGCGAACGAAAGCCGTCTTGATTGACAGTGTCATTGCAGGTCTCGTCAGCGTTGGCGTGGA ACAGCTCGTGCGAAAGAAAGTAAAGAGCGAGTTCGTGCATGCGGTCATCACACCGACACTACTGACATATGCCATGGAAG CGTGGCAAATGAGTCGAGGTGGACAAACCATCGGCTATAAACTGATGGGGCTTGAATTGACAAACGATGACGAAACGCCT GTCACGGCGAAACAAGCACTACAGCGCGCCCTGCACCGTGATACTTCGTCAGTCGTACGTTATTGGAAAGACCGTGCACA TTTCGAACAAGAAGACGGCGCCGTGTTACCACACGATGCCCGTTACCATATGCATGTACGTGAAAAGAACTGA
Upstream 100 bases:
>100_bases CGATTCAAGCGCTTCATGTCGCGCGTGCCTTGATCATGGCGTCTGAAGAAGGCGAAGGGATCGAAGTGTTGACGTCAGGG ATGATGCAGAGGATGAGCCG
Downstream 100 bases:
>100_bases CCAATATGGCCAGTTCTTTTTTTCAATCCTTGATTTTACTTAAGATGGCAGTCGTTAAGGCGACGATTGTTCCGAGAACA AGCCCGTTAGAGAAGACGGT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 130; Mature: 130
Protein sequence:
>130_residues MNPLTKKRTKAVLIDSVIAGLVSVGVEQLVRKKVKSEFVHAVITPTLLTYAMEAWQMSRGGQTIGYKLMGLELTNDDETP VTAKQALQRALHRDTSSVVRYWKDRAHFEQEDGAVLPHDARYHMHVREKN
Sequences:
>Translated_130_residues MNPLTKKRTKAVLIDSVIAGLVSVGVEQLVRKKVKSEFVHAVITPTLLTYAMEAWQMSRGGQTIGYKLMGLELTNDDETP VTAKQALQRALHRDTSSVVRYWKDRAHFEQEDGAVLPHDARYHMHVREKN >Mature_130_residues MNPLTKKRTKAVLIDSVIAGLVSVGVEQLVRKKVKSEFVHAVITPTLLTYAMEAWQMSRGGQTIGYKLMGLELTNDDETP VTAKQALQRALHRDTSSVVRYWKDRAHFEQEDGAVLPHDARYHMHVREKN
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 14755; Mature: 14755
Theoretical pI: Translated: 9.97; Mature: 9.97
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 3.8 %Met (Translated Protein) 3.8 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 3.8 %Met (Mature Protein) 3.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNPLTKKRTKAVLIDSVIAGLVSVGVEQLVRKKVKSEFVHAVITPTLLTYAMEAWQMSRG CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC GQTIGYKLMGLELTNDDETPVTAKQALQRALHRDTSSVVRYWKDRAHFEQEDGAVLPHDA CCEECEEEEEEEECCCCCCCCHHHHHHHHHHHCCHHHHHHHHHHHHCCCCCCCCCCCCCC RYHMHVREKN EEEEEEECCC >Mature Secondary Structure MNPLTKKRTKAVLIDSVIAGLVSVGVEQLVRKKVKSEFVHAVITPTLLTYAMEAWQMSRG CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC GQTIGYKLMGLELTNDDETPVTAKQALQRALHRDTSSVVRYWKDRAHFEQEDGAVLPHDA CCEECEEEEEEEECCCCCCCCHHHHHHHHHHHCCHHHHHHHHHHHHCCCCCCCCCCCCCC RYHMHVREKN EEEEEEECCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA