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The map label for this gene is yraR [H]

Identifier: 229917701

GI number: 229917701

Start: 1936410

End: 1937057

Strand: Direct

Name: yraR [H]

Synonym: EAT1b_1978

Alternate gene names: 229917701

Gene position: 1936410-1937057 (Clockwise)

Preceding gene: 229917700

Following gene: 229917702

Centisome position: 64.55

GC content: 53.09

Gene sequence:

>648_bases
ATGGGGAAAACTGCACTTGTCGTAGGCGCGACCGGCTTGATTGGCCGCGAATTGGTGGAACAGTTGTTAGAGAGTGACCG
TTATGATGCGGTCTGGATTGTTGTCCGTCGCTCGAAGCGTTGGAGTCATCCGAAGTTACATGAGGTCGTCGGTTTCGAGG
AGATGGATTCGTCCCTTCCGCAGATTGACGACGTGTACTGTGCGCTCGGCACAACGATTGCGGTAGCCGGCTCGCAAGAA
GCGTTCAAACAAGTTGATTTAGAATTACCACTTGAAGTTGCCCGTGTCGCCAAGGCACATGGTGCGACGCGCTATGCGGT
CGTATCGGCACAAGGCGCATCGTTGCGTTCATCTTTCTTTTATAACCGTGTGAAAGGGGAACTTGAGAACGCGTTACGCA
TCTTCAACTTCCATCACTTAATTATCGCGCGTCCTTCTCTGTTACTCGGGGAACGTGATTCATTCCGCCTAGGGGAGAAA
GCGGCCGAGGTCATCAGTCGACCGTTCCAGTCATTCTTGCTTGAGAAGACACCGGAAGTCGCACCGATTCAAGCGCTTCA
TGTCGCGCGTGCCTTGATCATGGCGTCTGAAGAAGGCGAAGGGATCGAAGTGTTGACGTCAGGGATGATGCAGAGGATGA
GCCGATGA

Upstream 100 bases:

>100_bases
TTCTTCCGTATGATGGACCGATTCCGTCCCGGGACAATCATTGCCGAGGAACGGCAAGTCAGCTAGACTGAAGGAAATAG
TAGTCTAGGAGGAGTCACGA

Downstream 100 bases:

>100_bases
ATCCATTGACAAAAAAGCGAACGAAAGCCGTCTTGATTGACAGTGTCATTGCAGGTCTCGTCAGCGTTGGCGTGGAACAG
CTCGTGCGAAAGAAAGTAAA

Product: NAD-dependent epimerase/dehydratase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 215; Mature: 214

Protein sequence:

>215_residues
MGKTALVVGATGLIGRELVEQLLESDRYDAVWIVVRRSKRWSHPKLHEVVGFEEMDSSLPQIDDVYCALGTTIAVAGSQE
AFKQVDLELPLEVARVAKAHGATRYAVVSAQGASLRSSFFYNRVKGELENALRIFNFHHLIIARPSLLLGERDSFRLGEK
AAEVISRPFQSFLLEKTPEVAPIQALHVARALIMASEEGEGIEVLTSGMMQRMSR

Sequences:

>Translated_215_residues
MGKTALVVGATGLIGRELVEQLLESDRYDAVWIVVRRSKRWSHPKLHEVVGFEEMDSSLPQIDDVYCALGTTIAVAGSQE
AFKQVDLELPLEVARVAKAHGATRYAVVSAQGASLRSSFFYNRVKGELENALRIFNFHHLIIARPSLLLGERDSFRLGEK
AAEVISRPFQSFLLEKTPEVAPIQALHVARALIMASEEGEGIEVLTSGMMQRMSR
>Mature_214_residues
GKTALVVGATGLIGRELVEQLLESDRYDAVWIVVRRSKRWSHPKLHEVVGFEEMDSSLPQIDDVYCALGTTIAVAGSQEA
FKQVDLELPLEVARVAKAHGATRYAVVSAQGASLRSSFFYNRVKGELENALRIFNFHHLIIARPSLLLGERDSFRLGEKA
AEVISRPFQSFLLEKTPEVAPIQALHVARALIMASEEGEGIEVLTSGMMQRMSR

Specific function: Unknown

COG id: COG0702

COG function: function code MG; Predicted nucleoside-diphosphate-sugar epimerases

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: To yeast YER004W [H]

Homologues:

Organism=Homo sapiens, GI148728166, Length=164, Percent_Identity=35.9756097560976, Blast_Score=91, Evalue=1e-18,
Organism=Homo sapiens, GI148728172, Length=164, Percent_Identity=35.9756097560976, Blast_Score=91, Evalue=1e-18,
Organism=Homo sapiens, GI148728168, Length=164, Percent_Identity=35.9756097560976, Blast_Score=91, Evalue=1e-18,
Organism=Homo sapiens, GI148728164, Length=164, Percent_Identity=35.9756097560976, Blast_Score=91, Evalue=1e-18,
Organism=Escherichia coli, GI87082218, Length=218, Percent_Identity=36.697247706422, Blast_Score=111, Evalue=3e-26,
Organism=Caenorhabditis elegans, GI71983631, Length=202, Percent_Identity=32.1782178217822, Blast_Score=107, Evalue=4e-24,
Organism=Saccharomyces cerevisiae, GI6320840, Length=161, Percent_Identity=34.7826086956522, Blast_Score=75, Evalue=1e-14,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR016040
- InterPro:   IPR000534 [H]

Pfam domain/function: PF01118 Semialdhyde_dh [H]

EC number: NA

Molecular weight: Translated: 23819; Mature: 23688

Theoretical pI: Translated: 6.80; Mature: 6.80

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
2.8 %Met     (Translated Protein)
3.3 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
2.3 %Met     (Mature Protein)
2.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MGKTALVVGATGLIGRELVEQLLESDRYDAVWIVVRRSKRWSHPKLHEVVGFEEMDSSLP
CCCCEEEEECCHHHHHHHHHHHHHCCCCCEEEEEEECCCCCCCCHHHHHHCHHHHHHCCC
QIDDVYCALGTTIAVAGSQEAFKQVDLELPLEVARVAKAHGATRYAVVSAQGASLRSSFF
CHHHHHHHHCCEEEECCCHHHHHHCCCCCCHHHHHHHHHCCCCEEEEEECCCCHHHHHHH
YNRVKGELENALRIFNFHHLIIARPSLLLGERDSFRLGEKAAEVISRPFQSFLLEKTPEV
HHHHHHHHHHHHHHHHHHHHHHCCCHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCC
APIQALHVARALIMASEEGEGIEVLTSGMMQRMSR
CHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHCC
>Mature Secondary Structure 
GKTALVVGATGLIGRELVEQLLESDRYDAVWIVVRRSKRWSHPKLHEVVGFEEMDSSLP
CCCEEEEECCHHHHHHHHHHHHHCCCCCEEEEEEECCCCCCCCHHHHHHCHHHHHHCCC
QIDDVYCALGTTIAVAGSQEAFKQVDLELPLEVARVAKAHGATRYAVVSAQGASLRSSFF
CHHHHHHHHCCEEEECCCHHHHHHCCCCCCHHHHHHHHHCCCCEEEEEECCCCHHHHHHH
YNRVKGELENALRIFNFHHLIIARPSLLLGERDSFRLGEKAAEVISRPFQSFLLEKTPEV
HHHHHHHHHHHHHHHHHHHHHHCCCHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCC
APIQALHVARALIMASEEGEGIEVLTSGMMQRMSR
CHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9278503 [H]