Definition Exiguobacterium sp. AT1b, complete genome.
Accession NC_012673
Length 2,999,895

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The map label for this gene is ydcZ [C]

Identifier: 229917585

GI number: 229917585

Start: 1828148

End: 1828573

Strand: Direct

Name: ydcZ [C]

Synonym: EAT1b_1860

Alternate gene names: 229917585

Gene position: 1828148-1828573 (Clockwise)

Preceding gene: 229917584

Following gene: 229917586

Centisome position: 60.94

GC content: 46.48

Gene sequence:

>426_bases
ATGGGAATTTTATTTGCCATCTTATCAGGGACGTTCATCGCCCTTCAAGGAATCTTTAATGCAAAACTAGGAGACGCGGT
AGGCGCATGGATGTCCGTCACAATCGTTCATTTTGTCGGACTTCTGTTAGCACTCGCGATTTACTTCTTCAAGCGAGATG
CGGACATGACAGCCTTCAAGCGTGTGCCTTGGTATTATAGTTTGGGAGGATTGTTCGGGGTATTCGTTGTCTTCGGCGAA
CTGACGGCGATTCAACAACTCGGGGTTACATGGGCAATTTGTGTATTGCTTGTGGCACAATTAGTAGGAGCCTTCATCAT
CGATTTGAATGGTTGGTTTGGTGTCAAACGGAAACCGATGAACACGGGACAGGTCATGGGACTCGTCTTGATGGTCGTCG
GCATCGGAATCTATACATTTTCTTAA

Upstream 100 bases:

>100_bases
CAACTTCGAATGTTGAAGTTGCTTTTTTATTTTTTGGACATATGTCCTATTCAAGTCATCTCTCTTTTCGTAAAGTCAGA
CGAAGAGAAAGGGGAATGAC

Downstream 100 bases:

>100_bases
GGAGTTCATTTTACATGATGAATATTATGGATGCACTGACACGATTGCAGTGGAATCATCTGTTTTCGAATGAAACGCTT
GAGTCCTCATCCGTGGTGAC

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 141; Mature: 140

Protein sequence:

>141_residues
MGILFAILSGTFIALQGIFNAKLGDAVGAWMSVTIVHFVGLLLALAIYFFKRDADMTAFKRVPWYYSLGGLFGVFVVFGE
LTAIQQLGVTWAICVLLVAQLVGAFIIDLNGWFGVKRKPMNTGQVMGLVLMVVGIGIYTFS

Sequences:

>Translated_141_residues
MGILFAILSGTFIALQGIFNAKLGDAVGAWMSVTIVHFVGLLLALAIYFFKRDADMTAFKRVPWYYSLGGLFGVFVVFGE
LTAIQQLGVTWAICVLLVAQLVGAFIIDLNGWFGVKRKPMNTGQVMGLVLMVVGIGIYTFS
>Mature_140_residues
GILFAILSGTFIALQGIFNAKLGDAVGAWMSVTIVHFVGLLLALAIYFFKRDADMTAFKRVPWYYSLGGLFGVFVVFGEL
TAIQQLGVTWAICVLLVAQLVGAFIIDLNGWFGVKRKPMNTGQVMGLVLMVVGIGIYTFS

Specific function: Unknown

COG id: COG3238

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Integral Membrane Protein [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 15320; Mature: 15188

Theoretical pI: Translated: 9.56; Mature: 9.56

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
4.3 %Met     (Translated Protein)
5.0 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
3.6 %Met     (Mature Protein)
4.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MGILFAILSGTFIALQGIFNAKLGDAVGAWMSVTIVHFVGLLLALAIYFFKRDADMTAFK
CHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHH
RVPWYYSLGGLFGVFVVFGELTAIQQLGVTWAICVLLVAQLVGAFIIDLNGWFGVKRKPM
HCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCC
NTGQVMGLVLMVVGIGIYTFS
CHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure 
GILFAILSGTFIALQGIFNAKLGDAVGAWMSVTIVHFVGLLLALAIYFFKRDADMTAFK
HHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHH
RVPWYYSLGGLFGVFVVFGELTAIQQLGVTWAICVLLVAQLVGAFIIDLNGWFGVKRKPM
HCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCC
NTGQVMGLVLMVVGIGIYTFS
CHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: NA