| Definition | Exiguobacterium sp. AT1b, complete genome. |
|---|---|
| Accession | NC_012673 |
| Length | 2,999,895 |
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The map label for this gene is katE [H]
Identifier: 229917553
GI number: 229917553
Start: 1796726
End: 1798735
Strand: Reverse
Name: katE [H]
Synonym: EAT1b_1828
Alternate gene names: 229917553
Gene position: 1798735-1796726 (Counterclockwise)
Preceding gene: 229917554
Following gene: 229917552
Centisome position: 59.96
GC content: 51.89
Gene sequence:
>2010_bases ATGGGGAACAAGAAAGAAGAGCAGTTAAAACAACATACGATTGATAACGAACAACAAGCTGGCTTGACGACAAATCAAGG TCTGAAGATGGCGGAAGACGAATTCTCGCTGAAAGCAGGACGTCGTGGTCCGACATTGATCGAGGATTTCCATTTCCGCG AGAAGATGACCCATTTCGACCATGAGCGGATTCCGGAGCGGATCGTCCATGCTCGCGGCGTAGGAGCACATGGAGAGTTC CAGGTGTATGAACCGCTCGCTGAATTCACAAAAGCGAACTTTTTGAACGACCCTTCGAAGACGACACCCGTATTCGTCCG TTTCTCGACCGTCCAGGGCTCACGTGGATCCGCGGATACGGTCCGTGACGTCCGTGGTTTTGCGACGAAGTTCTACACAG ACGAAGGGAACTACGATTTAGTCGGAAACAACATCCCGGTCTTCTTTATCCAAGATGCCATCAAGTTCCCGGACCTCGTC CACGCTGTGAAGCCTGAGCCACATACGGAAGTGCCGCAAGGAGGAAGCGCGCACGATACGTTCTGGGATTTTGTCGGACA AAACCATGAAACGGCTCACATGGTCATGTGGGCGATGAGTGACCGGGGGATTCCACGTAGTCTACGCATGATGGAAGGGT TCGGGGTGCATACATTCCGTCTTGTAAATGCGGAAGGAAAAGCGCATTTCGTCAAATTCCATTGGAAACCGAAGCTCGGG GTTCATTCACAAGTATGGGACGAAGCCCAAAAGGCAGTCGGGAAAAACGCTGACTTCCACCGTGTCGACTTGTATGAAGC CATCAATAAAGGCGACTATCCGGAATGGGAGCTCGGTCTACAGCTGATCCCGGAAGAAGACGAGTTCAACTACGACTTCG ACATCTTAGACCCGACCAAACTGTGGCCGGAAGAGGAGATTCCAGTGAAACTCGTCGGGAAGATGACACTCAATCGGAAC GTCGACAACTTCTTCGCGGAAACCGAACAAGTCGCCTTCCACCCGGGTCATCTCGTCCCAGGAATCGACTTCTCGAACGA TCCGCTCTTACAAGGTCGTCTGTTCTCGTATACGGACACGCAGCTTTCACGTCTCGGTGGACCAAACTTCCACCAGATCC CAATCAACAAGCCCGTTTGTCCGTTCCACAACAACCAGCGGGACGGGATGCATCAGATGGCCGTCCATAAAGGTCAGACG AGCTATCATAAAAATGCGCTCAATAACAATCAGCCTGAACCCGTACCAGCCGACCAAGGTGGATTTGAGCACTATCAAGA GAAAGTCGATGGACATAAGATTCGGGGACGTAGTGACAGCTTCCTTGATTTCTACTCACAGGCGAAGCTCTTCTACAACA GCATGACCGATGTCGAGAAACAACACATCCAAGATGCCTGCAGTTTTGAGCTCGGAAAATGTGAGTCGGACATGGTGAAA GAGAACGCCGTCGATTTATTGAACCGCATCGATCGTCATCTCGCTGAAGTCGTCGCCGACAACTTAGGAGTACATGTGCC AGAAGAGAATAATGAGGTCCAGTCAGATAAGACGTCCCCTGCCCTCTCGATGGCGAACACGATCAAAAAGCCCGATACGA AGAGCGTCGCCCTTCTCCTTGCAGGTGACGTGGATGCGAACCAGGTGAAACAGTGGGTGCAGACGCTCGCCGATCACAAC GTCAACTACAGCCTCGTCGGCAAGAAGGCGTATATGCTTGGTGACCTGAAGGTGAAGGAGACGTACGATACGGTCGACTC GAGCCTCTTCGATGCTGCCTTCTTAGTGAGTGCCGCGACGACTGTCGAGGATGATGTGCTCGAATTTATCGAGAACACGT ACAAACACTATAAGCCGCTCGCCCTACACGTACACCATAAAGAGGCACTCGCCACATGTCGCGTGAAGCAAGATCAGCCT GGTGTCTTCACGTTTGACGAGCATAACCTCGATGGATTCAATGCGTTCATCGATGGGATTGCGACTGCCCGATTCTGGGA CCGTGCCTAA
Upstream 100 bases:
>100_bases TTTGAAAAAGAGGGATTTTTTTATTGGCGTTAGGGAACACCGATACAGTAGGTCAAATGGTGACTTACGACGGTCAGTCA TACTTAAGGGAGGCAATCAC
Downstream 100 bases:
>100_bases CGACGTCACTTGACTCGACTCGATTCCCGAGTCGAGTTTTTTTCATGTCTGTCATTCACTGCATGCAGTGCATCATCTCG GACAATCCTAATTTGATTTG
Product: Catalase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 669; Mature: 668
Protein sequence:
>669_residues MGNKKEEQLKQHTIDNEQQAGLTTNQGLKMAEDEFSLKAGRRGPTLIEDFHFREKMTHFDHERIPERIVHARGVGAHGEF QVYEPLAEFTKANFLNDPSKTTPVFVRFSTVQGSRGSADTVRDVRGFATKFYTDEGNYDLVGNNIPVFFIQDAIKFPDLV HAVKPEPHTEVPQGGSAHDTFWDFVGQNHETAHMVMWAMSDRGIPRSLRMMEGFGVHTFRLVNAEGKAHFVKFHWKPKLG VHSQVWDEAQKAVGKNADFHRVDLYEAINKGDYPEWELGLQLIPEEDEFNYDFDILDPTKLWPEEEIPVKLVGKMTLNRN VDNFFAETEQVAFHPGHLVPGIDFSNDPLLQGRLFSYTDTQLSRLGGPNFHQIPINKPVCPFHNNQRDGMHQMAVHKGQT SYHKNALNNNQPEPVPADQGGFEHYQEKVDGHKIRGRSDSFLDFYSQAKLFYNSMTDVEKQHIQDACSFELGKCESDMVK ENAVDLLNRIDRHLAEVVADNLGVHVPEENNEVQSDKTSPALSMANTIKKPDTKSVALLLAGDVDANQVKQWVQTLADHN VNYSLVGKKAYMLGDLKVKETYDTVDSSLFDAAFLVSAATTVEDDVLEFIENTYKHYKPLALHVHHKEALATCRVKQDQP GVFTFDEHNLDGFNAFIDGIATARFWDRA
Sequences:
>Translated_669_residues MGNKKEEQLKQHTIDNEQQAGLTTNQGLKMAEDEFSLKAGRRGPTLIEDFHFREKMTHFDHERIPERIVHARGVGAHGEF QVYEPLAEFTKANFLNDPSKTTPVFVRFSTVQGSRGSADTVRDVRGFATKFYTDEGNYDLVGNNIPVFFIQDAIKFPDLV HAVKPEPHTEVPQGGSAHDTFWDFVGQNHETAHMVMWAMSDRGIPRSLRMMEGFGVHTFRLVNAEGKAHFVKFHWKPKLG VHSQVWDEAQKAVGKNADFHRVDLYEAINKGDYPEWELGLQLIPEEDEFNYDFDILDPTKLWPEEEIPVKLVGKMTLNRN VDNFFAETEQVAFHPGHLVPGIDFSNDPLLQGRLFSYTDTQLSRLGGPNFHQIPINKPVCPFHNNQRDGMHQMAVHKGQT SYHKNALNNNQPEPVPADQGGFEHYQEKVDGHKIRGRSDSFLDFYSQAKLFYNSMTDVEKQHIQDACSFELGKCESDMVK ENAVDLLNRIDRHLAEVVADNLGVHVPEENNEVQSDKTSPALSMANTIKKPDTKSVALLLAGDVDANQVKQWVQTLADHN VNYSLVGKKAYMLGDLKVKETYDTVDSSLFDAAFLVSAATTVEDDVLEFIENTYKHYKPLALHVHHKEALATCRVKQDQP GVFTFDEHNLDGFNAFIDGIATARFWDRA >Mature_668_residues GNKKEEQLKQHTIDNEQQAGLTTNQGLKMAEDEFSLKAGRRGPTLIEDFHFREKMTHFDHERIPERIVHARGVGAHGEFQ VYEPLAEFTKANFLNDPSKTTPVFVRFSTVQGSRGSADTVRDVRGFATKFYTDEGNYDLVGNNIPVFFIQDAIKFPDLVH AVKPEPHTEVPQGGSAHDTFWDFVGQNHETAHMVMWAMSDRGIPRSLRMMEGFGVHTFRLVNAEGKAHFVKFHWKPKLGV HSQVWDEAQKAVGKNADFHRVDLYEAINKGDYPEWELGLQLIPEEDEFNYDFDILDPTKLWPEEEIPVKLVGKMTLNRNV DNFFAETEQVAFHPGHLVPGIDFSNDPLLQGRLFSYTDTQLSRLGGPNFHQIPINKPVCPFHNNQRDGMHQMAVHKGQTS YHKNALNNNQPEPVPADQGGFEHYQEKVDGHKIRGRSDSFLDFYSQAKLFYNSMTDVEKQHIQDACSFELGKCESDMVKE NAVDLLNRIDRHLAEVVADNLGVHVPEENNEVQSDKTSPALSMANTIKKPDTKSVALLLAGDVDANQVKQWVQTLADHNV NYSLVGKKAYMLGDLKVKETYDTVDSSLFDAAFLVSAATTVEDDVLEFIENTYKHYKPLALHVHHKEALATCRVKQDQPG VFTFDEHNLDGFNAFIDGIATARFWDRA
Specific function: Decomposes hydrogen peroxide into water and oxygen; serves to protect cells from the toxic effects of hydrogen peroxide [H]
COG id: COG0753
COG function: function code P; Catalase
Gene ontology:
Cell location: Cytoplasm (Probable) [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the catalase family. HPII subfamily [H]
Homologues:
Organism=Homo sapiens, GI4557014, Length=462, Percent_Identity=40.9090909090909, Blast_Score=340, Evalue=4e-93, Organism=Escherichia coli, GI48994891, Length=667, Percent_Identity=55.6221889055472, Blast_Score=730, Evalue=0.0, Organism=Caenorhabditis elegans, GI25151141, Length=494, Percent_Identity=42.1052631578947, Blast_Score=376, Evalue=1e-104, Organism=Caenorhabditis elegans, GI71998444, Length=495, Percent_Identity=40.6060606060606, Blast_Score=375, Evalue=1e-104, Organism=Caenorhabditis elegans, GI25147792, Length=490, Percent_Identity=41.6326530612245, Blast_Score=370, Evalue=1e-102, Organism=Saccharomyces cerevisiae, GI6320462, Length=487, Percent_Identity=37.782340862423, Blast_Score=316, Evalue=1e-86, Organism=Saccharomyces cerevisiae, GI6321525, Length=412, Percent_Identity=38.3495145631068, Blast_Score=289, Evalue=1e-78, Organism=Drosophila melanogaster, GI17981717, Length=400, Percent_Identity=44, Blast_Score=340, Evalue=2e-93, Organism=Drosophila melanogaster, GI19920968, Length=405, Percent_Identity=41.2345679012346, Blast_Score=332, Evalue=5e-91,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR002226 - InterPro: IPR020835 - InterPro: IPR010582 - InterPro: IPR018028 - InterPro: IPR011614 [H]
Pfam domain/function: PF00199 Catalase; PF06628 Catalase-rel [H]
EC number: =1.11.1.6 [H]
Molecular weight: Translated: 75876; Mature: 75744
Theoretical pI: Translated: 5.72; Mature: 5.72
Prosite motif: PS00437 CATALASE_1
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 2.2 %Met (Translated Protein) 2.8 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 2.1 %Met (Mature Protein) 2.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGNKKEEQLKQHTIDNEQQAGLTTNQGLKMAEDEFSLKAGRRGPTLIEDFHFREKMTHFD CCCCHHHHHHHHCCCCCHHCCCCCCCCCEECCHHHHHCCCCCCCCHHHHHHHHHHHHHCC HERIPERIVHARGVGAHGEFQVYEPLAEFTKANFLNDPSKTTPVFVRFSTVQGSRGSADT HHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCEEEEEEEEECCCCCCHHH VRDVRGFATKFYTDEGNYDLVGNNIPVFFIQDAIKFPDLVHAVKPEPHTEVPQGGSAHDT HHHHHHHHHHEEECCCCEEEECCCCCEEEECCHHCCHHHHHHCCCCCCCCCCCCCCCCHH FWDFVGQNHETAHMVMWAMSDRGIPRSLRMMEGFGVHTFRLVNAEGKAHFVKFHWKPKLG HHHHHCCCCCCEEEEEEEECCCCCCHHHHHHHCCCCEEEEEEECCCCEEEEEEEECCCCC VHSQVWDEAQKAVGKNADFHRVDLYEAINKGDYPEWELGLQLIPEEDEFNYDFDILDPTK CCHHHHHHHHHHHCCCCCCEEEHHHHHHCCCCCCCCCCCEEECCCCCCCCCCEECCCHHH LWPEEEIPVKLVGKMTLNRNVDNFFAETEQVAFHPGHLVPGIDFSNDPLLQGRLFSYTDT CCCCCCCCEEEEEEEHHCCCHHHHHHCCHHEEECCCCCCCCCCCCCCCCCCCEEECCCHH QLSRLGGPNFHQIPINKPVCPFHNNQRDGMHQMAVHKGQTSYHKNALNNNQPEPVPADQG HHHHCCCCCEEECCCCCCCCCCCCCCCCCHHHHHHHCCCCHHHHHCCCCCCCCCCCCCCC GFEHYQEKVDGHKIRGRSDSFLDFYSQAKLFYNSMTDVEKQHIQDACSFELGKCESDMVK CHHHHHHHCCCCEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHH ENAVDLLNRIDRHLAEVVADNLGVHVPEENNEVQSDKTSPALSMANTIKKPDTKSVALLL HHHHHHHHHHHHHHHHHHHHHCCEECCCCCCCCCCCCCCHHHHHHHHHCCCCCCCEEEEE AGDVDANQVKQWVQTLADHNVNYSLVGKKAYMLGDLKVKETYDTVDSSLFDAAFLVSAAT ECCCCHHHHHHHHHHHHHCCCCEEEECCEEEEEECEEEHHHHHHHHHHHHHHHHHHHHHH TVEDDVLEFIENTYKHYKPLALHVHHKEALATCRVKQDQPGVFTFDEHNLDGFNAFIDGI HHHHHHHHHHHHHHHHCCCEEEEEEHHHHHHHHEECCCCCCEEEECCCCCCHHHHHHHHH ATARFWDRA HHHHHHCCC >Mature Secondary Structure GNKKEEQLKQHTIDNEQQAGLTTNQGLKMAEDEFSLKAGRRGPTLIEDFHFREKMTHFD CCCHHHHHHHHCCCCCHHCCCCCCCCCEECCHHHHHCCCCCCCCHHHHHHHHHHHHHCC HERIPERIVHARGVGAHGEFQVYEPLAEFTKANFLNDPSKTTPVFVRFSTVQGSRGSADT HHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCEEEEEEEEECCCCCCHHH VRDVRGFATKFYTDEGNYDLVGNNIPVFFIQDAIKFPDLVHAVKPEPHTEVPQGGSAHDT HHHHHHHHHHEEECCCCEEEECCCCCEEEECCHHCCHHHHHHCCCCCCCCCCCCCCCCHH FWDFVGQNHETAHMVMWAMSDRGIPRSLRMMEGFGVHTFRLVNAEGKAHFVKFHWKPKLG HHHHHCCCCCCEEEEEEEECCCCCCHHHHHHHCCCCEEEEEEECCCCEEEEEEEECCCCC VHSQVWDEAQKAVGKNADFHRVDLYEAINKGDYPEWELGLQLIPEEDEFNYDFDILDPTK CCHHHHHHHHHHHCCCCCCEEEHHHHHHCCCCCCCCCCCEEECCCCCCCCCCEECCCHHH LWPEEEIPVKLVGKMTLNRNVDNFFAETEQVAFHPGHLVPGIDFSNDPLLQGRLFSYTDT CCCCCCCCEEEEEEEHHCCCHHHHHHCCHHEEECCCCCCCCCCCCCCCCCCCEEECCCHH QLSRLGGPNFHQIPINKPVCPFHNNQRDGMHQMAVHKGQTSYHKNALNNNQPEPVPADQG HHHHCCCCCEEECCCCCCCCCCCCCCCCCHHHHHHHCCCCHHHHHCCCCCCCCCCCCCCC GFEHYQEKVDGHKIRGRSDSFLDFYSQAKLFYNSMTDVEKQHIQDACSFELGKCESDMVK CHHHHHHHCCCCEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHH ENAVDLLNRIDRHLAEVVADNLGVHVPEENNEVQSDKTSPALSMANTIKKPDTKSVALLL HHHHHHHHHHHHHHHHHHHHHCCEECCCCCCCCCCCCCCHHHHHHHHHCCCCCCCEEEEE AGDVDANQVKQWVQTLADHNVNYSLVGKKAYMLGDLKVKETYDTVDSSLFDAAFLVSAAT ECCCCHHHHHHHHHHHHHCCCCEEEECCEEEEEECEEEHHHHHHHHHHHHHHHHHHHHHH TVEDDVLEFIENTYKHYKPLALHVHHKEALATCRVKQDQPGVFTFDEHNLDGFNAFIDGI HHHHHHHHHHHHHHHHCCCEEEEEEHHHHHHHHEECCCCCCEEEECCCCCCHHHHHHHHH ATARFWDRA HHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA