| Definition | Exiguobacterium sp. AT1b, complete genome. |
|---|---|
| Accession | NC_012673 |
| Length | 2,999,895 |
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The map label for this gene is ywoG [H]
Identifier: 229917552
GI number: 229917552
Start: 1795378
End: 1796565
Strand: Reverse
Name: ywoG [H]
Synonym: EAT1b_1827
Alternate gene names: 229917552
Gene position: 1796565-1795378 (Counterclockwise)
Preceding gene: 229917553
Following gene: 229917551
Centisome position: 59.89
GC content: 51.35
Gene sequence:
>1188_bases ATGATGCAACAACCTATTCAAAAACTTTGGACGAGAGACTTTTTAATCATCTCGCTCATCAACTTCTTCCTGACGCTCAT CTTTTTCTTATTGATGGTCACCATCGGGGTGCATGCCGTCGAGTCGTACGGGGCGACCACGAGTCAAGCAGGACTCGTCA CCGGCATCTTCATCATCGGGACGCTGACCGGGCGCTTGTTCATCGGTCGACTGATCGATTCAATCGGTCGGAAGAAGACA CTTTATATCGGGCTCGTCTTTTTCACCGCCACGATTTTATTGTACTTCGTCCATTGGGGTGTCGGTTTCTTATTACTGAC ACGGTTCGTACACGGACTCGGGATGGGATTATCGAGTACGGCAACTGGAACCATCGTCGCGCAAGTCATTCCCGCGACTC GAAAAGGTGAAGGGATCGGTTACTACAGCATGAGTTCTACTCTGGCGACAGCCATCGGGCCCTTCGTCGGATTACTCCTC AGCCAACACACGAGCTTCACCGTCATCTTCGGCCTTTGCTTTGTGATCGGGGTCATCAGTTTGGCGAGTACGTTCTTTGT GAATGTACCGGAAGTCGACGCACCGGAAGTCGTGCGTGGATTCTCTTTAAAATCGTTCGTCGAACCAAAAGCGCTCCCGA TTGCCTTGATTATCGGGATGGCCGCACTAAGCTACTCGAGTGTCTTGTCCTACATCAACTTCTACGCGAGTGAACTCGAC TTGATCGAGGCAGCGAGTATCTTCTTCCTCGTCTATTCGGTCGCCGTTCTGTTATCACGACCAATCACAGGAAAATTGAT GGACGCGCGCGGAGCGAACGTCGTCATGTATCCGGCAATCGCCATCTTCGCGATCGGACTGCTCGTGCTCAGCCAGGCGA ATAGCGGTTGGATGCTTCTACTTGCCGGTGCGTTAATCGGATTAGGCTTCGGGAATATCCAATCTGGCACCCAAGCAATC GCCGTCAAGGCGTCTCCACCTCACCGAATGGGGATGGCGACATCGACCTTCTTCATCGCACTTGATGCCGGTCTAGGGTT CGGCCCCTATTTCATCGGGTTGTTGATTCCGTTGACAGGCTTCTCGACCCTTTATTTGATTCTTTCAGGCGTCGTTCTCT TTACCATTTTCTTGTATTACGTCATGAACGGACGGAACGAACAAAAACAACTGAACGAAGCTGCTTGA
Upstream 100 bases:
>100_bases GCATGCAGTGCATCATCTCGGACAATCCTAATTTGATTTGGTATACTCTTTTAGTTATGTTTATTAACTATTCGAATTTG AAGAAAAGGAGGCGTCACGT
Downstream 100 bases:
>100_bases CGGGATGTACGTACATCCCGTCTTTTTTTGAAAGTTCACACATTTGGTCGAATGATGCGGTAAGATAAAAATGACGTGTT AAAAATAGAATGAACGAAAT
Product: major facilitator superfamily MFS_1
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 395; Mature: 395
Protein sequence:
>395_residues MMQQPIQKLWTRDFLIISLINFFLTLIFFLLMVTIGVHAVESYGATTSQAGLVTGIFIIGTLTGRLFIGRLIDSIGRKKT LYIGLVFFTATILLYFVHWGVGFLLLTRFVHGLGMGLSSTATGTIVAQVIPATRKGEGIGYYSMSSTLATAIGPFVGLLL SQHTSFTVIFGLCFVIGVISLASTFFVNVPEVDAPEVVRGFSLKSFVEPKALPIALIIGMAALSYSSVLSYINFYASELD LIEAASIFFLVYSVAVLLSRPITGKLMDARGANVVMYPAIAIFAIGLLVLSQANSGWMLLLAGALIGLGFGNIQSGTQAI AVKASPPHRMGMATSTFFIALDAGLGFGPYFIGLLIPLTGFSTLYLILSGVVLFTIFLYYVMNGRNEQKQLNEAA
Sequences:
>Translated_395_residues MMQQPIQKLWTRDFLIISLINFFLTLIFFLLMVTIGVHAVESYGATTSQAGLVTGIFIIGTLTGRLFIGRLIDSIGRKKT LYIGLVFFTATILLYFVHWGVGFLLLTRFVHGLGMGLSSTATGTIVAQVIPATRKGEGIGYYSMSSTLATAIGPFVGLLL SQHTSFTVIFGLCFVIGVISLASTFFVNVPEVDAPEVVRGFSLKSFVEPKALPIALIIGMAALSYSSVLSYINFYASELD LIEAASIFFLVYSVAVLLSRPITGKLMDARGANVVMYPAIAIFAIGLLVLSQANSGWMLLLAGALIGLGFGNIQSGTQAI AVKASPPHRMGMATSTFFIALDAGLGFGPYFIGLLIPLTGFSTLYLILSGVVLFTIFLYYVMNGRNEQKQLNEAA >Mature_395_residues MMQQPIQKLWTRDFLIISLINFFLTLIFFLLMVTIGVHAVESYGATTSQAGLVTGIFIIGTLTGRLFIGRLIDSIGRKKT LYIGLVFFTATILLYFVHWGVGFLLLTRFVHGLGMGLSSTATGTIVAQVIPATRKGEGIGYYSMSSTLATAIGPFVGLLL SQHTSFTVIFGLCFVIGVISLASTFFVNVPEVDAPEVVRGFSLKSFVEPKALPIALIIGMAALSYSSVLSYINFYASELD LIEAASIFFLVYSVAVLLSRPITGKLMDARGANVVMYPAIAIFAIGLLVLSQANSGWMLLLAGALIGLGFGNIQSGTQAI AVKASPPHRMGMATSTFFIALDAGLGFGPYFIGLLIPLTGFSTLYLILSGVVLFTIFLYYVMNGRNEQKQLNEAA
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the major facilitator superfamily [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR020846 - InterPro: IPR011701 - InterPro: IPR016196 [H]
Pfam domain/function: PF07690 MFS_1 [H]
EC number: NA
Molecular weight: Translated: 42451; Mature: 42451
Theoretical pI: Translated: 9.49; Mature: 9.49
Prosite motif: PS50850 MFS ; PS00216 SUGAR_TRANSPORT_1 ; PS00217 SUGAR_TRANSPORT_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 3.0 %Met (Translated Protein) 3.3 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 3.0 %Met (Mature Protein) 3.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MMQQPIQKLWTRDFLIISLINFFLTLIFFLLMVTIGVHAVESYGATTSQAGLVTGIFIIG CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHH TLTGRLFIGRLIDSIGRKKTLYIGLVFFTATILLYFVHWGVGFLLLTRFVHGLGMGLSST HHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC ATGTIVAQVIPATRKGEGIGYYSMSSTLATAIGPFVGLLLSQHTSFTVIFGLCFVIGVIS CHHHHHHHHCCCCCCCCCCEEEHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHH LASTFFVNVPEVDAPEVVRGFSLKSFVEPKALPIALIIGMAALSYSSVLSYINFYASELD HHHHHEEECCCCCCHHHHHCCCHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LIEAASIFFLVYSVAVLLSRPITGKLMDARGANVVMYPAIAIFAIGLLVLSQANSGWMLL HHHHHHHHHHHHHHHHHHCCCCCCCEECCCCCCEEEHHHHHHHHHHHHHHHCCCCCHHHH LAGALIGLGFGNIQSGTQAIAVKASPPHRMGMATSTFFIALDAGLGFGPYFIGLLIPLTG HHHHHHHCCCCCCCCCCEEEEEECCCCHHHCCHHHEEEEEEECCCCHHHHHHHHHHHHHH FSTLYLILSGVVLFTIFLYYVMNGRNEQKQLNEAA HHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHCCC >Mature Secondary Structure MMQQPIQKLWTRDFLIISLINFFLTLIFFLLMVTIGVHAVESYGATTSQAGLVTGIFIIG CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHH TLTGRLFIGRLIDSIGRKKTLYIGLVFFTATILLYFVHWGVGFLLLTRFVHGLGMGLSST HHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC ATGTIVAQVIPATRKGEGIGYYSMSSTLATAIGPFVGLLLSQHTSFTVIFGLCFVIGVIS CHHHHHHHHCCCCCCCCCCEEEHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHH LASTFFVNVPEVDAPEVVRGFSLKSFVEPKALPIALIIGMAALSYSSVLSYINFYASELD HHHHHEEECCCCCCHHHHHCCCHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LIEAASIFFLVYSVAVLLSRPITGKLMDARGANVVMYPAIAIFAIGLLVLSQANSGWMLL HHHHHHHHHHHHHHHHHHCCCCCCCEECCCCCCEEEHHHHHHHHHHHHHHHCCCCCHHHH LAGALIGLGFGNIQSGTQAIAVKASPPHRMGMATSTFFIALDAGLGFGPYFIGLLIPLTG HHHHHHHCCCCCCCCCCEEEEEECCCCHHHCCHHHEEEEEEECCCCHHHHHHHHHHHHHH FSTLYLILSGVVLFTIFLYYVMNGRNEQKQLNEAA HHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 9353933; 9384377 [H]