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The map label for this gene is tpn32 [H]

Identifier: 229917528

GI number: 229917528

Start: 1770097

End: 1770909

Strand: Direct

Name: tpn32 [H]

Synonym: EAT1b_1803

Alternate gene names: 229917528

Gene position: 1770097-1770909 (Clockwise)

Preceding gene: 229917527

Following gene: 229917533

Centisome position: 59.01

GC content: 49.2

Gene sequence:

>813_bases
ATGAAAAAATTGATGGCACTTCTTGCCTCGCTCACACTCGTCCTCGCAGCATGTGGGAACGATACAGAAACACAAACGAA
ACAAGCAAATGAACCACAGACATTGAAAGTCGCATCACTCATCCCACCGATGACAGATATGCTTGAAATCGCGAAAGAAC
AGCTCGCAGAAGACAATATCGAACTTGAAATTGTCGTTCTCGGAGACAACGTCCAACCGAACTCGGCACTTGCGGCGAAA
GAAGTCGATGCGAACTTCTTCCAACACGTTCCGTATATGGAGGAGTTCAACCGCAGCAACGATGCGAATCTCGTTCCAAT
CGAACCGATTTATTTTGCCAACTATGGTGTATACGCAAAAAACTATGACAACATGGAAGACCTCCCGGAAGGCGCAACGA
TTGCGATTGCCAACGACGTATCGAATATCGACCGTTCGCTCTCCCTGCTCGCACAACATGATGTGATCGAGCTCGGAGAG
AAGGAAGGCACGTATTATACACAAGCCGATATCACATCGAACCCGAAAAACTTCAAGTTTGAAGAAGTCGACTTGTTGAT
GCTCGCGCGCGCGTACGATGACGTCGATGCGGTCTTGATGACACCGGCTTACGCGGCACCACTCGGTTTGACACCGAAGA
GTGACGCACTCTTAACAGAAGGTGTCGAGAACGATTTCGCCATCACCCTTGTCGCACGTGAAGACAACCAGGATGACGAA
GCGATCCAAAAACTCGGCGAAGCGCTCACAAGTGACGAAGTCCGTGCATTCCTGCAAGAAAACTATGATGAGACGGCCAT
TCCGGCGTTTTAA

Upstream 100 bases:

>100_bases
TGATTCTCATCATGCTCGTCTTCGTCCAGTTGATTCAGTTCACGGGCACGACCGTGGCACGCATCATCGACAAACGCTAA
ATAGAAAGTAGGAAATGAAT

Downstream 100 bases:

>100_bases
TTAATTCCTTAGTCAACGTAAAATATCTTGTTCAAACGAAGCAATGACTTGTTGCGTCACGCGTAGATAGTCTTGGTCAG
ATTGAGCTGACTCGTAAAGG

Product: NLPA lipoprotein

Products: NA

Alternate protein names: 29 kDa protein [H]

Number of amino acids: Translated: 270; Mature: 270

Protein sequence:

>270_residues
MKKLMALLASLTLVLAACGNDTETQTKQANEPQTLKVASLIPPMTDMLEIAKEQLAEDNIELEIVVLGDNVQPNSALAAK
EVDANFFQHVPYMEEFNRSNDANLVPIEPIYFANYGVYAKNYDNMEDLPEGATIAIANDVSNIDRSLSLLAQHDVIELGE
KEGTYYTQADITSNPKNFKFEEVDLLMLARAYDDVDAVLMTPAYAAPLGLTPKSDALLTEGVENDFAITLVAREDNQDDE
AIQKLGEALTSDEVRAFLQENYDETAIPAF

Sequences:

>Translated_270_residues
MKKLMALLASLTLVLAACGNDTETQTKQANEPQTLKVASLIPPMTDMLEIAKEQLAEDNIELEIVVLGDNVQPNSALAAK
EVDANFFQHVPYMEEFNRSNDANLVPIEPIYFANYGVYAKNYDNMEDLPEGATIAIANDVSNIDRSLSLLAQHDVIELGE
KEGTYYTQADITSNPKNFKFEEVDLLMLARAYDDVDAVLMTPAYAAPLGLTPKSDALLTEGVENDFAITLVAREDNQDDE
AIQKLGEALTSDEVRAFLQENYDETAIPAF
>Mature_270_residues
MKKLMALLASLTLVLAACGNDTETQTKQANEPQTLKVASLIPPMTDMLEIAKEQLAEDNIELEIVVLGDNVQPNSALAAK
EVDANFFQHVPYMEEFNRSNDANLVPIEPIYFANYGVYAKNYDNMEDLPEGATIAIANDVSNIDRSLSLLAQHDVIELGE
KEGTYYTQADITSNPKNFKFEEVDLLMLARAYDDVDAVLMTPAYAAPLGLTPKSDALLTEGVENDFAITLVAREDNQDDE
AIQKLGEALTSDEVRAFLQENYDETAIPAF

Specific function: Unknown

COG id: COG1464

COG function: function code P; ABC-type metal ion transport system, periplasmic component/surface antigen

Gene ontology:

Cell location: Cell membrane; Lipid-anchor (Probable) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the nlpA lipoprotein family [H]

Homologues:

Organism=Escherichia coli, GI1786396, Length=269, Percent_Identity=31.9702602230483, Blast_Score=139, Evalue=2e-34,
Organism=Escherichia coli, GI1790093, Length=247, Percent_Identity=30.3643724696356, Blast_Score=125, Evalue=3e-30,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004872 [H]

Pfam domain/function: PF03180 Lipoprotein_9 [H]

EC number: NA

Molecular weight: Translated: 29761; Mature: 29761

Theoretical pI: Translated: 3.82; Mature: 3.82

Prosite motif: PS00013 PROKAR_LIPOPROTEIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
3.0 %Met     (Translated Protein)
3.3 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
3.0 %Met     (Mature Protein)
3.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKKLMALLASLTLVLAACGNDTETQTKQANEPQTLKVASLIPPMTDMLEIAKEQLAEDNI
CHHHHHHHHHHHHHHHHCCCCCHHHHHCCCCCCEEEHHHHCCCHHHHHHHHHHHHHCCCC
ELEIVVLGDNVQPNSALAAKEVDANFFQHVPYMEEFNRSNDANLVPIEPIYFANYGVYAK
EEEEEEECCCCCCCCCHHHHHHHHHHHHHCCCHHHHCCCCCCCEEECCCEEEECCCEEEC
NYDNMEDLPEGATIAIANDVSNIDRSLSLLAQHDVIELGEKEGTYYTQADITSNPKNFKF
CCCCHHHCCCCCEEEEECCHHHHHHHHHHHHHHHHHHCCCCCCCEEEECCCCCCCCCCCH
EEVDLLMLARAYDDVDAVLMTPAYAAPLGLTPKSDALLTEGVENDFAITLVAREDNQDDE
HHHHHHHHHHHHCCCHHEEECCCHHCCCCCCCCCCHHHHCCCCCCEEEEEEEECCCCHHH
AIQKLGEALTSDEVRAFLQENYDETAIPAF
HHHHHHHHHHHHHHHHHHHCCCCCCCCCCC
>Mature Secondary Structure
MKKLMALLASLTLVLAACGNDTETQTKQANEPQTLKVASLIPPMTDMLEIAKEQLAEDNI
CHHHHHHHHHHHHHHHHCCCCCHHHHHCCCCCCEEEHHHHCCCHHHHHHHHHHHHHCCCC
ELEIVVLGDNVQPNSALAAKEVDANFFQHVPYMEEFNRSNDANLVPIEPIYFANYGVYAK
EEEEEEECCCCCCCCCHHHHHHHHHHHHHCCCHHHHCCCCCCCEEECCCEEEECCCEEEC
NYDNMEDLPEGATIAIANDVSNIDRSLSLLAQHDVIELGEKEGTYYTQADITSNPKNFKF
CCCCHHHCCCCCEEEEECCHHHHHHHHHHHHHHHHHHCCCCCCCEEEECCCCCCCCCCCH
EEVDLLMLARAYDDVDAVLMTPAYAAPLGLTPKSDALLTEGVENDFAITLVAREDNQDDE
HHHHHHHHHHHHCCCHHEEECCCHHCCCCCCCCCCHHHHCCCCCCEEEEEEEECCCCHHH
AIQKLGEALTSDEVRAFLQENYDETAIPAF
HHHHHHHHHHHHHHHHHHHCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9665876 [H]