| Definition | Exiguobacterium sp. AT1b, complete genome. |
|---|---|
| Accession | NC_012673 |
| Length | 2,999,895 |
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The map label for this gene is metI [H]
Identifier: 229917527
GI number: 229917527
Start: 1769414
End: 1770076
Strand: Direct
Name: metI [H]
Synonym: EAT1b_1802
Alternate gene names: 229917527
Gene position: 1769414-1770076 (Clockwise)
Preceding gene: 229917526
Following gene: 229917528
Centisome position: 58.98
GC content: 52.49
Gene sequence:
>663_bases ATGCCTGACATCTTGGTGCGCTATCAATCAGAGATTTGGCAGTCCATCGCCGAGACGTTCATGATGGTCGGAGTATCGAT TCTCGCCGCGATTCTAGTCGGACTTCCGTTAGGCACGTGGCTTTACCTTTCGCGTAAAGGACAATTGTTAGAGAATCAAA TCGTCTTCTCCGTCCTCAACCTGGTCGTGAACATCGTCCGGTCTTTCCCGTTTTTGTTACTCGTCGTGTTTTTGATTCCA TTTACACGGCTTATCATCGGGACGGCCATCGGAACGGCGGCGGCGACGGTGCCGCTCTCCATCATCGCCATCGCGCATTA TGCGCGCCTCGTCGAGCAGTCGTTGATTGATGTCCCACGCGGGGTCATTGAAGCGGCACTCTCGATGGGAGCGTCGGTTA AAGACATCATCTTTAAGTTTCTATATGTGGAAGCCCGATCTGGTCTCGTCCTTGGCTTGACCACATCCATCATCAGCTTT ATCTCATACTCGACGATCATGGGGGTCGTCGGGGGCGGTGGCATCGGTGACTTTGCCATCCGTTATGGGTATCAGCAGTT CCAGACCGAACTCATGCTCTATATGATTCTCATCATGCTCGTCTTCGTCCAGTTGATTCAGTTCACGGGCACGACCGTGG CACGCATCATCGACAAACGCTAA
Upstream 100 bases:
>100_bases ACCGTTCATGAGACGATTGAACGGGAGCCGACAGGGGTGGTCGCCATCGATCAGAACCCAAGTTGGTTCGTCGAACAGTT GCGAGAGGAAGGTGAATCGA
Downstream 100 bases:
>100_bases ATAGAAAGTAGGAAATGAATATGAAAAAATTGATGGCACTTCTTGCCTCGCTCACACTCGTCCTCGCAGCATGTGGGAAC GATACAGAAACACAAACGAA
Product: binding-protein-dependent transport systems inner membrane component
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 220; Mature: 219
Protein sequence:
>220_residues MPDILVRYQSEIWQSIAETFMMVGVSILAAILVGLPLGTWLYLSRKGQLLENQIVFSVLNLVVNIVRSFPFLLLVVFLIP FTRLIIGTAIGTAAATVPLSIIAIAHYARLVEQSLIDVPRGVIEAALSMGASVKDIIFKFLYVEARSGLVLGLTTSIISF ISYSTIMGVVGGGGIGDFAIRYGYQQFQTELMLYMILIMLVFVQLIQFTGTTVARIIDKR
Sequences:
>Translated_220_residues MPDILVRYQSEIWQSIAETFMMVGVSILAAILVGLPLGTWLYLSRKGQLLENQIVFSVLNLVVNIVRSFPFLLLVVFLIP FTRLIIGTAIGTAAATVPLSIIAIAHYARLVEQSLIDVPRGVIEAALSMGASVKDIIFKFLYVEARSGLVLGLTTSIISF ISYSTIMGVVGGGGIGDFAIRYGYQQFQTELMLYMILIMLVFVQLIQFTGTTVARIIDKR >Mature_219_residues PDILVRYQSEIWQSIAETFMMVGVSILAAILVGLPLGTWLYLSRKGQLLENQIVFSVLNLVVNIVRSFPFLLLVVFLIPF TRLIIGTAIGTAAATVPLSIIAIAHYARLVEQSLIDVPRGVIEAALSMGASVKDIIFKFLYVEARSGLVLGLTTSIISFI SYSTIMGVVGGGGIGDFAIRYGYQQFQTELMLYMILIMLVFVQLIQFTGTTVARIIDKR
Specific function: Part of the binding-protein-dependent transport system for D-methionine. Probably responsible for the translocation of the substrate across the membrane [H]
COG id: COG2011
COG function: function code P; ABC-type metal ion transport system, permease component
Gene ontology:
Cell location: Cell inner membrane; Multi-pass membrane protein [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 ABC transmembrane type-1 domain [H]
Homologues:
Organism=Escherichia coli, GI1786397, Length=209, Percent_Identity=39.7129186602871, Blast_Score=136, Evalue=9e-34,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000515 [H]
Pfam domain/function: PF00528 BPD_transp_1 [H]
EC number: NA
Molecular weight: Translated: 24184; Mature: 24053
Theoretical pI: Translated: 9.28; Mature: 9.28
Prosite motif: PS50928 ABC_TM1
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 3.6 %Met (Translated Protein) 3.6 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 3.2 %Met (Mature Protein) 3.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPDILVRYQSEIWQSIAETFMMVGVSILAAILVGLPLGTWLYLSRKGQLLENQIVFSVLN CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHCCCHHHHHHHHHHHHH LVVNIVRSFPFLLLVVFLIPFTRLIIGTAIGTAAATVPLSIIAIAHYARLVEQSLIDVPR HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCH GVIEAALSMGASVKDIIFKFLYVEARSGLVLGLTTSIISFISYSTIMGVVGGGGIGDFAI HHHHHHHHCCCHHHHHHHHHHHHHHCCCEEHHHHHHHHHHHHHHHHHHHHCCCCHHHHHH RYGYQQFQTELMLYMILIMLVFVQLIQFTGTTVARIIDKR HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHCCC >Mature Secondary Structure PDILVRYQSEIWQSIAETFMMVGVSILAAILVGLPLGTWLYLSRKGQLLENQIVFSVLN CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHCCCHHHHHHHHHHHHH LVVNIVRSFPFLLLVVFLIPFTRLIIGTAIGTAAATVPLSIIAIAHYARLVEQSLIDVPR HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCH GVIEAALSMGASVKDIIFKFLYVEARSGLVLGLTTSIISFISYSTIMGVVGGGGIGDFAI HHHHHHHHCCCHHHHHHHHHHHHHHCCCEEHHHHHHHHHHHHHHHHHHHHCCCCHHHHHH RYGYQQFQTELMLYMILIMLVFVQLIQFTGTTVARIIDKR HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 10952301 [H]