Click here to switch to the map view.

The map label for this gene is pdxT [H]

Identifier: 229917442

GI number: 229917442

Start: 1676586

End: 1677164

Strand: Reverse

Name: pdxT [H]

Synonym: EAT1b_1717

Alternate gene names: 229917442

Gene position: 1677164-1676586 (Counterclockwise)

Preceding gene: 229917443

Following gene: 229917441

Centisome position: 55.91

GC content: 52.16

Gene sequence:

>579_bases
ATGGTGACGATTGGCGTATTAGGGATGCAAGGTGCGATTCGCGAGCATGTTCGCATGCTGGAAACGCTCGGTGCCCAAAC
CGTTGTAGTCCGCTCGCTAGAAGACTTGCAAGCGATTGACGGACTCGTGTTACCAGGGGGAGAGAGCACGGCGATGCGTC
GACTACTCGACCGTTACGGTCTGCTCGAACCACTTCGAGAGATGGAAAAGTTACCGATGTTCGGCACATGTGCCGGCATG
ATTCTTCTCGCGAACGAAGTCGAAGGGTATGACGCCCACTTGAAAAAAATCCCGATGACAGTGAAACGCAATGCGTTCGG
ACGTCAGGTCGACAGTTTTGAGGTCGACCTTCCAGTGAAAGGAATCGATGAGCCAGTCGAAGCGGTCTTCATTCGTGCCC
CACAAGTGGCACGCGTTGAACCAGAAGTAGATGTGCTCGCTGAAGTCGAGGAAGCGATTGTGGCGGTCCGTTACAATCAG
TATCTTGCTTGCTCGTTCCACCCCGAATTGACGGATGACCTCTCGTTACATCGCTATTTTATCGAGATGGTCAAAGCGAA
TCAGAGTCAACATGTATAA

Upstream 100 bases:

>100_bases
CGGATCGCGCACTTGTCAAAAGGATTGGGTGAGGCGATGAAAGGACTTGACGTCCGCACGCTCAAAGAAGAAGAACTCAT
GGCACCACGAGGCTGGTAAG

Downstream 100 bases:

>100_bases
GTTTGAGGGACCTCGCAAAAAGGGGGTCCTTCAAACTTATTTTTTGTTACACTGAACAAAGAAGCGTACAGAAAGGGGAA
ACGATGTGAAGGCCCGTTAT

Product: SNO glutamine amidotransferase

Products: NA

Alternate protein names: Glutamine amidotransferase glutaminase subunit pdxT [H]

Number of amino acids: Translated: 192; Mature: 192

Protein sequence:

>192_residues
MVTIGVLGMQGAIREHVRMLETLGAQTVVVRSLEDLQAIDGLVLPGGESTAMRRLLDRYGLLEPLREMEKLPMFGTCAGM
ILLANEVEGYDAHLKKIPMTVKRNAFGRQVDSFEVDLPVKGIDEPVEAVFIRAPQVARVEPEVDVLAEVEEAIVAVRYNQ
YLACSFHPELTDDLSLHRYFIEMVKANQSQHV

Sequences:

>Translated_192_residues
MVTIGVLGMQGAIREHVRMLETLGAQTVVVRSLEDLQAIDGLVLPGGESTAMRRLLDRYGLLEPLREMEKLPMFGTCAGM
ILLANEVEGYDAHLKKIPMTVKRNAFGRQVDSFEVDLPVKGIDEPVEAVFIRAPQVARVEPEVDVLAEVEEAIVAVRYNQ
YLACSFHPELTDDLSLHRYFIEMVKANQSQHV
>Mature_192_residues
MVTIGVLGMQGAIREHVRMLETLGAQTVVVRSLEDLQAIDGLVLPGGESTAMRRLLDRYGLLEPLREMEKLPMFGTCAGM
ILLANEVEGYDAHLKKIPMTVKRNAFGRQVDSFEVDLPVKGIDEPVEAVFIRAPQVARVEPEVDVLAEVEEAIVAVRYNQ
YLACSFHPELTDDLSLHRYFIEMVKANQSQHV

Specific function: Involved in the hydrolysis of glutamine to glutamate and ammonia. Channels an ammonia molecule to pdxS [H]

COG id: COG0311

COG function: function code H; Predicted glutamine amidotransferase involved in pyridoxine biosynthesis

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the glutamine amidotransferase pdxT/SNO family [H]

Homologues:

Organism=Saccharomyces cerevisiae, GI6323742, Length=213, Percent_Identity=37.0892018779343, Blast_Score=111, Evalue=7e-26,
Organism=Saccharomyces cerevisiae, GI6323995, Length=223, Percent_Identity=37.6681614349776, Blast_Score=105, Evalue=4e-24,
Organism=Saccharomyces cerevisiae, GI6321048, Length=224, Percent_Identity=37.9464285714286, Blast_Score=103, Evalue=1e-23,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002161
- InterPro:   IPR021196 [H]

Pfam domain/function: PF01174 SNO [H]

EC number: NA

Molecular weight: Translated: 21446; Mature: 21446

Theoretical pI: Translated: 4.72; Mature: 4.72

Prosite motif: PS51130 PDXT_SNO_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
4.7 %Met     (Translated Protein)
5.7 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
4.7 %Met     (Mature Protein)
5.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MVTIGVLGMQGAIREHVRMLETLGAQTVVVRSLEDLQAIDGLVLPGGESTAMRRLLDRYG
CEEEEEECCHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCEEECCCCHHHHHHHHHHHC
LLEPLREMEKLPMFGTCAGMILLANEVEGYDAHLKKIPMTVKRNAFGRQVDSFEVDLPVK
HHHHHHHHHHCCCHHHHHHHHHEECCCCCHHHHHHHCCHHHHHCCCCCCCCCEEECCCCC
GIDEPVEAVFIRAPQVARVEPEVDVLAEVEEAIVAVRYNQYLACSFHPELTDDLSLHRYF
CCCCHHHHEEECCCCCEECCCCHHHHHHHHHHHHHHCCCCEEEEEECCCCCCHHHHHHHH
IEMVKANQSQHV
HHHHHCCCCCCC
>Mature Secondary Structure
MVTIGVLGMQGAIREHVRMLETLGAQTVVVRSLEDLQAIDGLVLPGGESTAMRRLLDRYG
CEEEEEECCHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCEEECCCCHHHHHHHHHHHC
LLEPLREMEKLPMFGTCAGMILLANEVEGYDAHLKKIPMTVKRNAFGRQVDSFEVDLPVK
HHHHHHHHHHCCCHHHHHHHHHEECCCCCHHHHHHHCCHHHHHCCCCCCCCCEEECCCCC
GIDEPVEAVFIRAPQVARVEPEVDVLAEVEEAIVAVRYNQYLACSFHPELTDDLSLHRYF
CCCCHHHHEEECCCCCEECCCCHHHHHHHHHHHHHHCCCCEEEEEECCCCCCHHHHHHHH
IEMVKANQSQHV
HHHHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA