Definition Exiguobacterium sp. AT1b, complete genome.
Accession NC_012673
Length 2,999,895

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The map label for this gene is yaaQ [H]

Identifier: 229917430

GI number: 229917430

Start: 1654252

End: 1654584

Strand: Reverse

Name: yaaQ [H]

Synonym: EAT1b_1705

Alternate gene names: 229917430

Gene position: 1654584-1654252 (Counterclockwise)

Preceding gene: 229917431

Following gene: 229917429

Centisome position: 55.15

GC content: 46.85

Gene sequence:

>333_bases
ATGATGAAAATGGTAATTGCAATCGTACATGATAAGGATAGCGCACGTTTGTCCGACGCACTCGTCGAGCAAGATTTCCG
CGCGACAAAGTTAGCCACGACGGGCGGATTTTTAAAAGAAGGTAATACAACGTTTATGATGGGGATTCCACAAGAGCGTC
TTGATGATTTGATGGATGTAATTCAATCGAACTGCTCGAGTCGCGACCAAATGATCACGCCGATCTCACCGATGGGAGGA
CATGCGGATTCATATATTCCTTACCCGGTCGAAGTACAAGTCGGAGGGGCGACGGTATTCGTCTTGCCGATCGAAGGATT
CCATCAGTTTTAA

Upstream 100 bases:

>100_bases
AACGCATCGTTCGGATTGATGCCGATCAATCGATTGAATGCATTCAAGATGAGGTACTTGACTATACAATTGAACGACTA
CAACAAGGAGGCGTACAAAA

Downstream 100 bases:

>100_bases
TGGGAGTTGGGCATATGCGTTTTCAAGAATTGAGCGAGTCGCAAACTGTCGTTTCTCGCATCATTCAAAATTCAATCGTT
TCGAATAAAGTGGGGCATGC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 110; Mature: 110

Protein sequence:

>110_residues
MMKMVIAIVHDKDSARLSDALVEQDFRATKLATTGGFLKEGNTTFMMGIPQERLDDLMDVIQSNCSSRDQMITPISPMGG
HADSYIPYPVEVQVGGATVFVLPIEGFHQF

Sequences:

>Translated_110_residues
MMKMVIAIVHDKDSARLSDALVEQDFRATKLATTGGFLKEGNTTFMMGIPQERLDDLMDVIQSNCSSRDQMITPISPMGG
HADSYIPYPVEVQVGGATVFVLPIEGFHQF
>Mature_110_residues
MMKMVIAIVHDKDSARLSDALVEQDFRATKLATTGGFLKEGNTTFMMGIPQERLDDLMDVIQSNCSSRDQMITPISPMGG
HADSYIPYPVEVQVGGATVFVLPIEGFHQF

Specific function: Unknown

COG id: COG3870

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR010375
- InterPro:   IPR011322 [H]

Pfam domain/function: PF06153 DUF970 [H]

EC number: NA

Molecular weight: Translated: 12108; Mature: 12108

Theoretical pI: Translated: 4.55; Mature: 4.55

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
7.3 %Met     (Translated Protein)
8.2 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
7.3 %Met     (Mature Protein)
8.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MMKMVIAIVHDKDSARLSDALVEQDFRATKLATTGGFLKEGNTTFMMGIPQERLDDLMDV
CCEEEEEEEECCCCHHHHHHHHHCCCCHHEEECCCCEEECCCEEEEEECCHHHHHHHHHH
IQSNCSSRDQMITPISPMGGHADSYIPYPVEVQVGGATVFVLPIEGFHQF
HHHCCCCCCCEECCCCCCCCCCCCCCCCCEEEEECCEEEEEEECCCCCCC
>Mature Secondary Structure
MMKMVIAIVHDKDSARLSDALVEQDFRATKLATTGGFLKEGNTTFMMGIPQERLDDLMDV
CCEEEEEEEECCCCHHHHHHHHHCCCCHHEEECCCCEEECCCEEEEEECCHHHHHHHHHH
IQSNCSSRDQMITPISPMGGHADSYIPYPVEVQVGGATVFVLPIEGFHQF
HHHCCCCCCCEECCCCCCCCCCCCCCCCCEEEEECCEEEEEEECCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 7584024; 9384377 [H]