Definition Exiguobacterium sp. AT1b, complete genome.
Accession NC_012673
Length 2,999,895

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The map label for this gene is 229917287

Identifier: 229917287

GI number: 229917287

Start: 1517946

End: 1519013

Strand: Reverse

Name: 229917287

Synonym: EAT1b_1562

Alternate gene names: NA

Gene position: 1519013-1517946 (Counterclockwise)

Preceding gene: 229917288

Following gene: 229917286

Centisome position: 50.64

GC content: 52.15

Gene sequence:

>1068_bases
ATGAGATGGATGATTTATGGGGCGAATGGCTATACGGGTGAGCTGGTTGCCCGACAAGCCGTTCGTGACGGAATGCGTCC
GGTTCTTGCCGGACGAAACGCAAGAGCGATTCATCGCCTAGGAGATGAACTGGGTTGCGAGACATCGATTTTTGCATTGA
GTCGTGAAGCCGCAATCGAGGCGCTTCACGATGTGGATTTAGTCCTTCATTGTGCAGGTCCTTTCACGGATACGAGCCAA
ATGATGATCGAGGCATGTCTAGAGACAGGTACGCATTACTTAGATATTACCGGGGAAATCGACGTGTTCGAATATGTCCA
TTCTAAACAGCGAGCGACTCAAGCCAAAGAACGTGGTGTGATTTTATGCTCGGGTGTCGGATTTGATGTCATTCCGACTG
ACTGTGTCGCGCGGAAATTAAAAGAGTTGATACCGGATGCGACAACACTCGCTCTTGGCTTTTCGGCGGCAGCCGGCATC
TCACCAGGAACCATGAAGACGGCCGTTCGTGGACTAGGGTCGAGTAGTGTGGAACGTGTGAACGGCAAATTATCACCATT
TCCAATTGGGGCAAAGCGGAGAACGATTGATTTTGGTCGCGGAAGCCGTACCGCGATTGCGATTCCGTGGGGAGATGTTT
CGACCGCCTACTACACGACGGACATTCCGAATATTACGACATGGGTACCAGTGCCGACAGCGGCCGCCTATGCTGCTCGC
GCTTTGTCATGGTTCAGCCCGATTCTCGGAAAAGAGGCCGTGCAGGAACGATTGCTCCGTTATGTCGACGAAAACGTATC
GGGACCAGACGAGGCTGTACGTGAAAAATCATCGACGTACGTATGGGGCGAAGCAACGAATGAGGAAGGACGAAAAGTAG
TCGTCCGTATTCAAACGGCAAGTACGTATGCCTTCACCGTGTACGGGGCGCTCGCCGTCGTCAAGCGGTTGCTCGGTTCG
GGTGGGATGCTTGCCGGAAGCTTCACACCAGCCATGCTATTCGGATCTCACTTTATCGAAGAGATTCAAGGTTCCTCTTC
GTTCGTGATTGATGAGATTCGTCCATGA

Upstream 100 bases:

>100_bases
GGAAGTGTGTATATCATCGATGTCATCCAAGAATTTTTCGTTCGATTCAACTTCTTTTAGGGAAACGAACAAGGACACAT
TGACATAAGGAGGAGTAAAA

Downstream 100 bases:

>100_bases
ATCGAGAAGTATGGGATTTACTCGACGAAAATCGGCAACCGCTCGGTCGAACGCACTTTCGTGGGGATGAACTAGAGCCA
CATACGTTTCATACGGTCAT

Product: saccharopine dehydrogenase

Products: NA

Alternate protein names: Integral Membrane Protein; Saccharopine Dehydrogenase Family Protein; UbiD Family Decarboxylase

Number of amino acids: Translated: 355; Mature: 355

Protein sequence:

>355_residues
MRWMIYGANGYTGELVARQAVRDGMRPVLAGRNARAIHRLGDELGCETSIFALSREAAIEALHDVDLVLHCAGPFTDTSQ
MMIEACLETGTHYLDITGEIDVFEYVHSKQRATQAKERGVILCSGVGFDVIPTDCVARKLKELIPDATTLALGFSAAAGI
SPGTMKTAVRGLGSSSVERVNGKLSPFPIGAKRRTIDFGRGSRTAIAIPWGDVSTAYYTTDIPNITTWVPVPTAAAYAAR
ALSWFSPILGKEAVQERLLRYVDENVSGPDEAVREKSSTYVWGEATNEEGRKVVVRIQTASTYAFTVYGALAVVKRLLGS
GGMLAGSFTPAMLFGSHFIEEIQGSSSFVIDEIRP

Sequences:

>Translated_355_residues
MRWMIYGANGYTGELVARQAVRDGMRPVLAGRNARAIHRLGDELGCETSIFALSREAAIEALHDVDLVLHCAGPFTDTSQ
MMIEACLETGTHYLDITGEIDVFEYVHSKQRATQAKERGVILCSGVGFDVIPTDCVARKLKELIPDATTLALGFSAAAGI
SPGTMKTAVRGLGSSSVERVNGKLSPFPIGAKRRTIDFGRGSRTAIAIPWGDVSTAYYTTDIPNITTWVPVPTAAAYAAR
ALSWFSPILGKEAVQERLLRYVDENVSGPDEAVREKSSTYVWGEATNEEGRKVVVRIQTASTYAFTVYGALAVVKRLLGS
GGMLAGSFTPAMLFGSHFIEEIQGSSSFVIDEIRP
>Mature_355_residues
MRWMIYGANGYTGELVARQAVRDGMRPVLAGRNARAIHRLGDELGCETSIFALSREAAIEALHDVDLVLHCAGPFTDTSQ
MMIEACLETGTHYLDITGEIDVFEYVHSKQRATQAKERGVILCSGVGFDVIPTDCVARKLKELIPDATTLALGFSAAAGI
SPGTMKTAVRGLGSSSVERVNGKLSPFPIGAKRRTIDFGRGSRTAIAIPWGDVSTAYYTTDIPNITTWVPVPTAAAYAAR
ALSWFSPILGKEAVQERLLRYVDENVSGPDEAVREKSSTYVWGEATNEEGRKVVVRIQTASTYAFTVYGALAVVKRLLGS
GGMLAGSFTPAMLFGSHFIEEIQGSSSFVIDEIRP

Specific function: Unknown

COG id: COG3268

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Homo sapiens, GI55770836, Length=221, Percent_Identity=27.1493212669683, Blast_Score=74, Evalue=2e-13,
Organism=Caenorhabditis elegans, GI17560066, Length=226, Percent_Identity=24.7787610619469, Blast_Score=66, Evalue=3e-11,
Organism=Caenorhabditis elegans, GI32567112, Length=226, Percent_Identity=24.7787610619469, Blast_Score=65, Evalue=4e-11,
Organism=Drosophila melanogaster, GI24646278, Length=143, Percent_Identity=31.4685314685315, Blast_Score=75, Evalue=5e-14,
Organism=Drosophila melanogaster, GI24644140, Length=145, Percent_Identity=31.7241379310345, Blast_Score=72, Evalue=6e-13,
Organism=Drosophila melanogaster, GI24644142, Length=145, Percent_Identity=31.7241379310345, Blast_Score=72, Evalue=6e-13,
Organism=Drosophila melanogaster, GI21356081, Length=145, Percent_Identity=31.7241379310345, Blast_Score=72, Evalue=6e-13,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 38319; Mature: 38319

Theoretical pI: Translated: 6.52; Mature: 6.52

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.4 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
3.7 %Cys+Met (Translated Protein)
1.4 %Cys     (Mature Protein)
2.3 %Met     (Mature Protein)
3.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRWMIYGANGYTGELVARQAVRDGMRPVLAGRNARAIHRLGDELGCETSIFALSREAAIE
CEEEEECCCCCCHHHHHHHHHHCCCCHHHCCCCHHHHHHHHHHHCCCHHHHHHHHHHHHH
ALHDVDLVLHCAGPFTDTSQMMIEACLETGTHYLDITGEIDVFEYVHSKQRATQAKERGV
HHHHHEEEEEECCCCCCHHHHHHHHHHHCCCEEEEECCCCHHHHHHHHHHHHHHHHHCCE
ILCSGVGFDVIPTDCVARKLKELIPDATTLALGFSAAAGISPGTMKTAVRGLGSSSVERV
EEECCCCCCCCCHHHHHHHHHHHCCCHHHHHHHHHHHCCCCCHHHHHHHHHCCCHHHHHH
NGKLSPFPIGAKRRTIDFGRGSRTAIAIPWGDVSTAYYTTDIPNITTWVPVPTAAAYAAR
CCCCCCCCCCCCCEEEECCCCCCEEEEEECCCCCCEEEECCCCCCEEEECCCHHHHHHHH
ALSWFSPILGKEAVQERLLRYVDENVSGPDEAVREKSSTYVWGEATNEEGRKVVVRIQTA
HHHHHHHHHCHHHHHHHHHHHHHCCCCCHHHHHHCCCCEEEEECCCCCCCCEEEEEEEEC
STYAFTVYGALAVVKRLLGSGGMLAGSFTPAMLFGSHFIEEIQGSSSFVIDEIRP
CEEHHHHHHHHHHHHHHHCCCCEEECCCCHHHHHHHHHHHHHCCCCCEEECCCCC
>Mature Secondary Structure
MRWMIYGANGYTGELVARQAVRDGMRPVLAGRNARAIHRLGDELGCETSIFALSREAAIE
CEEEEECCCCCCHHHHHHHHHHCCCCHHHCCCCHHHHHHHHHHHCCCHHHHHHHHHHHHH
ALHDVDLVLHCAGPFTDTSQMMIEACLETGTHYLDITGEIDVFEYVHSKQRATQAKERGV
HHHHHEEEEEECCCCCCHHHHHHHHHHHCCCEEEEECCCCHHHHHHHHHHHHHHHHHCCE
ILCSGVGFDVIPTDCVARKLKELIPDATTLALGFSAAAGISPGTMKTAVRGLGSSSVERV
EEECCCCCCCCCHHHHHHHHHHHCCCHHHHHHHHHHHCCCCCHHHHHHHHHCCCHHHHHH
NGKLSPFPIGAKRRTIDFGRGSRTAIAIPWGDVSTAYYTTDIPNITTWVPVPTAAAYAAR
CCCCCCCCCCCCCEEEECCCCCCEEEEEECCCCCCEEEECCCCCCEEEECCCHHHHHHHH
ALSWFSPILGKEAVQERLLRYVDENVSGPDEAVREKSSTYVWGEATNEEGRKVVVRIQTA
HHHHHHHHHCHHHHHHHHHHHHHCCCCCHHHHHHCCCCEEEEECCCCCCCCEEEEEEEEC
STYAFTVYGALAVVKRLLGSGGMLAGSFTPAMLFGSHFIEEIQGSSSFVIDEIRP
CEEHHHHHHHHHHHHHHHCCCCEEECCCCHHHHHHHHHHHHHCCCCCEEECCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA