| Definition | Exiguobacterium sp. AT1b, complete genome. |
|---|---|
| Accession | NC_012673 |
| Length | 2,999,895 |
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The map label for this gene is tenA [H]
Identifier: 229917255
GI number: 229917255
Start: 1496347
End: 1497021
Strand: Reverse
Name: tenA [H]
Synonym: EAT1b_1530
Alternate gene names: 229917255
Gene position: 1497021-1496347 (Counterclockwise)
Preceding gene: 229917257
Following gene: 229917254
Centisome position: 49.9
GC content: 47.85
Gene sequence:
>675_bases ATGAAATTTACAGATCACTTACGTCAAGAAGCGGATGGATTGTTTGAGGCAAGCTTTCATCACCCATTTGTTCGTTCACT CGGAGAAGGGACGCTCGATGAGAAGAAGTTCAGACATTACGTCATGCAAGATTCGTATTACTTGAATCAATTCTCAAAAG TGCAGGCCAAAGGGGCAACCCTCGCTCCGACGATGGAACTATCGAGTCGCTTTTTGACGCATGCCTTACACACGATTGAG GCGGAACTCTCCCTTCATCGAGAGTTCTTTACGATGCTCAACGTGACGGATGTCGAATTGGCGACATTTGAGCCAGCACC GACCGCTTATGCGTATGCGCTCCATATGCAACAGGCAGGACCGACACTCGGTGACGTATTGGCGTCAATCCTTCCGTGTT ATTGGGTATATTACGAAATCGGTGAACGCTTAAAAGATAAACGACCCGACCATCCGATTTATTCAGCTTGGATTGCGACA TACGGTTCGGAGTGGTTCCGTGAGCTGGTGGAAGAACAGATTGATCGGTTGGATGAATTGGCTGGACAAGCGACAGAAGA AGAACGGCTTCGTTACACAAAACTCTTCTTGAAGAGTTGCTATTACGAAGTCGCTTTTTGGGAAATGGCGTGGACGCTTG AGTCGTGGACATTGTCGCAGGAGGTCAACCAATGA
Upstream 100 bases:
>100_bases CGAGACGACTCATATGGCTTCACCTATATATGACTGTTCGAGACGCCGCTTCCGTTATGGGAGGCGGCGTCTTTTTATTA GTTTATAAGGGGGAGTTAGT
Downstream 100 bases:
>100_bases GACATGAGATTTGGAACGAGATTCGACAGCAGGCACCGTTGATTCACAACATCACGAACACGGTTGTGGCGAATTTTTCA GCGAATGGACTGCTCGCAAT
Product: transcriptional activator, TenA family
Products: NA
Alternate protein names: Thiaminase II; Transcriptional activator tenA [H]
Number of amino acids: Translated: 224; Mature: 224
Protein sequence:
>224_residues MKFTDHLRQEADGLFEASFHHPFVRSLGEGTLDEKKFRHYVMQDSYYLNQFSKVQAKGATLAPTMELSSRFLTHALHTIE AELSLHREFFTMLNVTDVELATFEPAPTAYAYALHMQQAGPTLGDVLASILPCYWVYYEIGERLKDKRPDHPIYSAWIAT YGSEWFRELVEEQIDRLDELAGQATEEERLRYTKLFLKSCYYEVAFWEMAWTLESWTLSQEVNQ
Sequences:
>Translated_224_residues MKFTDHLRQEADGLFEASFHHPFVRSLGEGTLDEKKFRHYVMQDSYYLNQFSKVQAKGATLAPTMELSSRFLTHALHTIE AELSLHREFFTMLNVTDVELATFEPAPTAYAYALHMQQAGPTLGDVLASILPCYWVYYEIGERLKDKRPDHPIYSAWIAT YGSEWFRELVEEQIDRLDELAGQATEEERLRYTKLFLKSCYYEVAFWEMAWTLESWTLSQEVNQ >Mature_224_residues MKFTDHLRQEADGLFEASFHHPFVRSLGEGTLDEKKFRHYVMQDSYYLNQFSKVQAKGATLAPTMELSSRFLTHALHTIE AELSLHREFFTMLNVTDVELATFEPAPTAYAYALHMQQAGPTLGDVLASILPCYWVYYEIGERLKDKRPDHPIYSAWIAT YGSEWFRELVEEQIDRLDELAGQATEEERLRYTKLFLKSCYYEVAFWEMAWTLESWTLSQEVNQ
Specific function: Stimulates the production of several extracellular degradative enzymes at the transcriptional level, probably by interfering with degS and degU, which are required for this effect. Is not an essential protein, but affects the sporulation frequency [H]
COG id: COG0819
COG function: function code K; Putative transcription activator
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the thiaminase-2 family [H]
Homologues:
Organism=Saccharomyces cerevisiae, GI6324517, Length=202, Percent_Identity=25.7425742574257, Blast_Score=75, Evalue=1e-14, Organism=Saccharomyces cerevisiae, GI6325378, Length=206, Percent_Identity=25.7281553398058, Blast_Score=62, Evalue=8e-11,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR016084 - InterPro: IPR004305 [H]
Pfam domain/function: PF03070 TENA_THI-4 [H]
EC number: =3.5.99.2 [H]
Molecular weight: Translated: 26217; Mature: 26217
Theoretical pI: Translated: 4.80; Mature: 4.80
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 2.7 %Met (Translated Protein) 3.6 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 2.7 %Met (Mature Protein) 3.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKFTDHLRQEADGLFEASFHHPFVRSLGEGTLDEKKFRHYVMQDSYYLNQFSKVQAKGAT CCCHHHHHHHHHHHHHHHHCCHHHHHHCCCCCHHHHHHHHHHHCHHHHHHHHHHHHCCCC LAPTMELSSRFLTHALHTIEAELSLHREFFTMLNVTDVELATFEPAPTAYAYALHMQQAG CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEECCCCCCHHHHHHHHHHHC PTLGDVLASILPCYWVYYEIGERLKDKRPDHPIYSAWIATYGSEWFRELVEEQIDRLDEL CCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH AGQATEEERLRYTKLFLKSCYYEVAFWEMAWTLESWTLSQEVNQ HCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC >Mature Secondary Structure MKFTDHLRQEADGLFEASFHHPFVRSLGEGTLDEKKFRHYVMQDSYYLNQFSKVQAKGAT CCCHHHHHHHHHHHHHHHHCCHHHHHHCCCCCHHHHHHHHHHHCHHHHHHHHHHHHCCCC LAPTMELSSRFLTHALHTIEAELSLHREFFTMLNVTDVELATFEPAPTAYAYALHMQQAG CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEECCCCCCHHHHHHHHHHHC PTLGDVLASILPCYWVYYEIGERLKDKRPDHPIYSAWIATYGSEWFRELVEEQIDRLDEL CCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH AGQATEEERLRYTKLFLKSCYYEVAFWEMAWTLESWTLSQEVNQ HCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 1898926; 9384377 [H]