| Definition | Exiguobacterium sp. AT1b, complete genome. |
|---|---|
| Accession | NC_012673 |
| Length | 2,999,895 |
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The map label for this gene is manA [H]
Identifier: 229917239
GI number: 229917239
Start: 1482752
End: 1483792
Strand: Reverse
Name: manA [H]
Synonym: EAT1b_1514
Alternate gene names: 229917239
Gene position: 1483792-1482752 (Counterclockwise)
Preceding gene: 229917240
Following gene: 229917237
Centisome position: 49.46
GC content: 46.49
Gene sequence:
>1041_bases ATGTATAAACTCAAACCGGTATTTAAAGAACGTATTTGGGGTGGCCGTCATCTAGAAACGTTATTTCATTTTAAGTTACC GGAAGGGAAAATCGGTGAATGTTGGGCGGCATCCGCACATCCAAATGGTATGACCGTATTTGAAAATGGACCGTATGAAG GGCAGACGCTAGCAGATTTATGGGATGCCCACCGATTGGAGTTATTCGGTCCTTACCCATTCGCTACGTTCCCCCTACAC GTCAAGTTACTCGACGCGCGTGCCTATTTATCGGTACAGGTTCATCCGAACGACGAGCAAGCACAGCGTCTGGAGCAAGA GGAATTTGGAAAAGAAGAGTGCTGGTATGTGTTAGATGCGGAACCGAATGCGGAAATCATTGTCGGTCATACATTCCGAG CCAAACAAGAAGTGTATACATGTGTGCAGCAAAAAGAATGGGCGACTCGTCTAAAAACACAACCCGTGAAAAAAGGAGAC TTTATCTATATTCCGAGCGGAACGGTTCACGCACTCGGTCCCGGTGTCGTCTTGCTTGAGATTCAACAGACGAGCGACCG GACATATCGACTGTACGATTTTGATCGCGTAGACGATACTGGGAATTTGCGAGAACTTCATATCGAGAAAGCAGTTGAAG TCATGAATATCCCAGACCGACGGACAGAGGAACTGATTCGGACAGATTTAGATAGTGGATTAACGACTGAATTGATTTCA AAACCATCGTTCACGATTATGCGACATCAAGTAGACGGTACTCCGGCTATTTTAGAGCGGGCTGAAACGTTCCGATTGAT TTCGGTCGTTTCAGGTGAAGGGTTCGTTCAAGACGAGGACGGTACGCAAGCAATCCGGGCAGGGGAACATTACTTCATTC CAAAAGGAAAAGGACCTCACTTGTTCACCGGAAAGGTGGAAATCGTCACAAGTGAAGTCCCTGTACCAACGACACAACGC ATCAATACTGTTTATCAAGTGGAGAAGGCACAGGACAAGCATCGTCAAGTGTCCAGTCGTTTGAATACTGAACCTCGATA A
Upstream 100 bases:
>100_bases CCCTCTTCATATATTGGATAGTTTCTCCCTTTTTAAGGGTATATCTAGGTAAAATCCAGGAAGGGGGAGTCGTTTCTTCT ATTTAAGAAACGCAGCACAT
Downstream 100 bases:
>100_bases ACACGACATCTTCTTTTGCTTTGAGCGTGTGAGCCGCACCACGTTGAATCGAGATGACGTCGGTCGGCTTCGCCTCAAAC GTTTCTCCATCAATCGTCAC
Product: mannose-6-phosphate isomerase, class I
Products: NA
Alternate protein names: Phosphohexomutase; Phosphomannose isomerase; PMI [H]
Number of amino acids: Translated: 346; Mature: 346
Protein sequence:
>346_residues MYKLKPVFKERIWGGRHLETLFHFKLPEGKIGECWAASAHPNGMTVFENGPYEGQTLADLWDAHRLELFGPYPFATFPLH VKLLDARAYLSVQVHPNDEQAQRLEQEEFGKEECWYVLDAEPNAEIIVGHTFRAKQEVYTCVQQKEWATRLKTQPVKKGD FIYIPSGTVHALGPGVVLLEIQQTSDRTYRLYDFDRVDDTGNLRELHIEKAVEVMNIPDRRTEELIRTDLDSGLTTELIS KPSFTIMRHQVDGTPAILERAETFRLISVVSGEGFVQDEDGTQAIRAGEHYFIPKGKGPHLFTGKVEIVTSEVPVPTTQR INTVYQVEKAQDKHRQVSSRLNTEPR
Sequences:
>Translated_346_residues MYKLKPVFKERIWGGRHLETLFHFKLPEGKIGECWAASAHPNGMTVFENGPYEGQTLADLWDAHRLELFGPYPFATFPLH VKLLDARAYLSVQVHPNDEQAQRLEQEEFGKEECWYVLDAEPNAEIIVGHTFRAKQEVYTCVQQKEWATRLKTQPVKKGD FIYIPSGTVHALGPGVVLLEIQQTSDRTYRLYDFDRVDDTGNLRELHIEKAVEVMNIPDRRTEELIRTDLDSGLTTELIS KPSFTIMRHQVDGTPAILERAETFRLISVVSGEGFVQDEDGTQAIRAGEHYFIPKGKGPHLFTGKVEIVTSEVPVPTTQR INTVYQVEKAQDKHRQVSSRLNTEPR >Mature_346_residues MYKLKPVFKERIWGGRHLETLFHFKLPEGKIGECWAASAHPNGMTVFENGPYEGQTLADLWDAHRLELFGPYPFATFPLH VKLLDARAYLSVQVHPNDEQAQRLEQEEFGKEECWYVLDAEPNAEIIVGHTFRAKQEVYTCVQQKEWATRLKTQPVKKGD FIYIPSGTVHALGPGVVLLEIQQTSDRTYRLYDFDRVDDTGNLRELHIEKAVEVMNIPDRRTEELIRTDLDSGLTTELIS KPSFTIMRHQVDGTPAILERAETFRLISVVSGEGFVQDEDGTQAIRAGEHYFIPKGKGPHLFTGKVEIVTSEVPVPTTQR INTVYQVEKAQDKHRQVSSRLNTEPR
Specific function: Unknown
COG id: COG1482
COG function: function code G; Phosphomannose isomerase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the mannose-6-phosphate isomerase type 1 family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR011051 - InterPro: IPR001250 - InterPro: IPR014628 - InterPro: IPR014710 [H]
Pfam domain/function: PF01238 PMI_typeI [H]
EC number: =5.3.1.8 [H]
Molecular weight: Translated: 39541; Mature: 39541
Theoretical pI: Translated: 6.06; Mature: 6.06
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 1.2 %Met (Translated Protein) 2.0 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 1.2 %Met (Mature Protein) 2.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MYKLKPVFKERIWGGRHLETLFHFKLPEGKIGECWAASAHPNGMTVFENGPYEGQTLADL CCCCCHHHHHHHCCCCEEEEEEEEECCCCCCCCEEECCCCCCCEEEEECCCCCCCHHHHH WDAHRLELFGPYPFATFPLHVKLLDARAYLSVQVHPNDEQAQRLEQEEFGKEECWYVLDA HCCCEEEEECCCCCEECEEEEEEEEEEEEEEEEECCCHHHHHHHHHHHCCCCCEEEEEEC EPNAEIIVGHTFRAKQEVYTCVQQKEWATRLKTQPVKKGDFIYIPSGTVHALGPGVVLLE CCCCCEEEECCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEECCCCEEECCCCEEEEE IQQTSDRTYRLYDFDRVDDTGNLRELHIEKAVEVMNIPDRRTEELIRTDLDSGLTTELIS EECCCCCEEEEEECCCCCCCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCCCHHHHHC KPSFTIMRHQVDGTPAILERAETFRLISVVSGEGFVQDEDGTQAIRAGEHYFIPKGKGPH CCCEEEEEEECCCCHHHHHHHHHEEEEEEECCCCEEECCCCCHHHHCCCEEEECCCCCCC LFTGKVEIVTSEVPVPTTQRINTVYQVEKAQDKHRQVSSRLNTEPR EEECEEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCC >Mature Secondary Structure MYKLKPVFKERIWGGRHLETLFHFKLPEGKIGECWAASAHPNGMTVFENGPYEGQTLADL CCCCCHHHHHHHCCCCEEEEEEEEECCCCCCCCEEECCCCCCCEEEEECCCCCCCHHHHH WDAHRLELFGPYPFATFPLHVKLLDARAYLSVQVHPNDEQAQRLEQEEFGKEECWYVLDA HCCCEEEEECCCCCEECEEEEEEEEEEEEEEEEECCCHHHHHHHHHHHCCCCCEEEEEEC EPNAEIIVGHTFRAKQEVYTCVQQKEWATRLKTQPVKKGDFIYIPSGTVHALGPGVVLLE CCCCCEEEECCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEECCCCEEECCCCEEEEE IQQTSDRTYRLYDFDRVDDTGNLRELHIEKAVEVMNIPDRRTEELIRTDLDSGLTTELIS EECCCCCEEEEEECCCCCCCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCCCHHHHHC KPSFTIMRHQVDGTPAILERAETFRLISVVSGEGFVQDEDGTQAIRAGEHYFIPKGKGPH CCCEEEEEEECCCCHHHHHHHHHEEEEEEECCCCEEECCCCCHHHHCCCEEEECCCCCCC LFTGKVEIVTSEVPVPTTQRINTVYQVEKAQDKHRQVSSRLNTEPR EEECEEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 9384377 [H]