| Definition | Exiguobacterium sp. AT1b, complete genome. |
|---|---|
| Accession | NC_012673 |
| Length | 2,999,895 |
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The map label for this gene is kynB [H]
Identifier: 229917230
GI number: 229917230
Start: 1470985
End: 1471608
Strand: Direct
Name: kynB [H]
Synonym: EAT1b_1505
Alternate gene names: 229917230
Gene position: 1470985-1471608 (Clockwise)
Preceding gene: 229917229
Following gene: 229917231
Centisome position: 49.03
GC content: 49.2
Gene sequence:
>624_bases ATGACTTGGATTGATGTATCACAGCCACTCCATGCCGATGTTGCGACATGGCCGGGAGATACAAAATTTTCGTATGATAT CGCGTGGCCGATGGCAGAGAGTGGTTCGGTCAATGTCGGGAAGATGACATTGAGTTTACATCTCGGGACCCACATCGATG CACCTTTTCATTTTGACGACCATGGGAAGCGCGTGATCGACCTCGATCCGTCCGTATATATCGGACCAGCCCGTGTGATT CATCTACCGCATAAGGCAAAGATTGAAGCATCTGATTTGGATGGTCATGATTTGACTGGGGTGGAACGCCTCATCTTAAA AACGGATGGTTGGCCCGATAAGCGTGTCTTCCCCGAGACGATCCCTGAACTGAAACCCTCTCTTGCCGATCGTCTCGGAG AACTCGGAATCTTCTTGATTGGACTCGACTTACCGTCAGTTGATGCGATTGACAGTAAAGAGATGGATGCCCATCACGCG TTAGCACGAAATGGTGTGCATATCCTAGAAGGACTCGTTTTAGACAATATCTTACCGGGAGATTATGACTTGAATGCTGT TCCGCTCCCGATTGTCGAAGGGGATGGAAGCCCCGTTCGCGCATTGCTTCGTCCTATATTGTAA
Upstream 100 bases:
>100_bases CGGCTCGTCTGGCGTGAACTATTTACGTCGCGTGCTCGACCATCGCTTCTTCCCAGAACTGTGGACGGTCCGGACATCAC TATAAGAGGAGCTGAATGCA
Downstream 100 bases:
>100_bases AGAGATAGCCGGAATCGGCTGTCTCTTTTTTGATTAGACAGGGATAGTCCGACGTTTGGCGAAATAGATGACATACGTGA TGAAAGGAGGCAGATCGGGT
Product: arylformamidase
Products: NA
Alternate protein names: KFA; N-formylkynurenine formamidase [H]
Number of amino acids: Translated: 207; Mature: 206
Protein sequence:
>207_residues MTWIDVSQPLHADVATWPGDTKFSYDIAWPMAESGSVNVGKMTLSLHLGTHIDAPFHFDDHGKRVIDLDPSVYIGPARVI HLPHKAKIEASDLDGHDLTGVERLILKTDGWPDKRVFPETIPELKPSLADRLGELGIFLIGLDLPSVDAIDSKEMDAHHA LARNGVHILEGLVLDNILPGDYDLNAVPLPIVEGDGSPVRALLRPIL
Sequences:
>Translated_207_residues MTWIDVSQPLHADVATWPGDTKFSYDIAWPMAESGSVNVGKMTLSLHLGTHIDAPFHFDDHGKRVIDLDPSVYIGPARVI HLPHKAKIEASDLDGHDLTGVERLILKTDGWPDKRVFPETIPELKPSLADRLGELGIFLIGLDLPSVDAIDSKEMDAHHA LARNGVHILEGLVLDNILPGDYDLNAVPLPIVEGDGSPVRALLRPIL >Mature_206_residues TWIDVSQPLHADVATWPGDTKFSYDIAWPMAESGSVNVGKMTLSLHLGTHIDAPFHFDDHGKRVIDLDPSVYIGPARVIH LPHKAKIEASDLDGHDLTGVERLILKTDGWPDKRVFPETIPELKPSLADRLGELGIFLIGLDLPSVDAIDSKEMDAHHAL ARNGVHILEGLVLDNILPGDYDLNAVPLPIVEGDGSPVRALLRPIL
Specific function: Catalyzes the hydrolysis of N-formyl-L-kynurenine to L- kynurenine [H]
COG id: COG1878
COG function: function code R; Predicted metal-dependent hydrolase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the kynB family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR017484 - InterPro: IPR007325 [H]
Pfam domain/function: PF04199 Cyclase [H]
EC number: =3.5.1.9 [H]
Molecular weight: Translated: 22625; Mature: 22494
Theoretical pI: Translated: 4.79; Mature: 4.79
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.9 %Met (Translated Protein) 1.9 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.5 %Met (Mature Protein) 1.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTWIDVSQPLHADVATWPGDTKFSYDIAWPMAESGSVNVGKMTLSLHLGTHIDAPFHFDD CCEECCCCCCCCCCEECCCCCCEEEEEECCCCCCCCCEEEEEEEEEEECCCCCCCCEECC HGKRVIDLDPSVYIGPARVIHLPHKAKIEASDLDGHDLTGVERLILKTDGWPDKRVFPET CCCEEEEECCCEEECCEEEEECCCCCEEEECCCCCCCCCCCEEEEEECCCCCCCCCCHHH IPELKPSLADRLGELGIFLIGLDLPSVDAIDSKEMDAHHALARNGVHILEGLVLDNILPG HHHCCHHHHHHHHCCEEEEEEECCCCCCCCCCCCCHHHHHHHHCCHHHHHHHHHHCCCCC DYDLNAVPLPIVEGDGSPVRALLRPIL CCCCCEEEEEEEECCCCHHHHHHHHCC >Mature Secondary Structure TWIDVSQPLHADVATWPGDTKFSYDIAWPMAESGSVNVGKMTLSLHLGTHIDAPFHFDD CEECCCCCCCCCCEECCCCCCEEEEEECCCCCCCCCEEEEEEEEEEECCCCCCCCEECC HGKRVIDLDPSVYIGPARVIHLPHKAKIEASDLDGHDLTGVERLILKTDGWPDKRVFPET CCCEEEEECCCEEECCEEEEECCCCCEEEECCCCCCCCCCCEEEEEECCCCCCCCCCHHH IPELKPSLADRLGELGIFLIGLDLPSVDAIDSKEMDAHHALARNGVHILEGLVLDNILPG HHHCCHHHHHHHHCCEEEEEEECCCCCCCCCCCCCHHHHHHHHCCHHHHHHHHHHCCCCC DYDLNAVPLPIVEGDGSPVRALLRPIL CCCCCEEEEEEEECCCCHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA