| Definition | Exiguobacterium sp. AT1b, complete genome. |
|---|---|
| Accession | NC_012673 |
| Length | 2,999,895 |
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The map label for this gene is hutM [H]
Identifier: 229917180
GI number: 229917180
Start: 1420161
End: 1421522
Strand: Direct
Name: hutM [H]
Synonym: EAT1b_1454
Alternate gene names: 229917180
Gene position: 1420161-1421522 (Clockwise)
Preceding gene: 229917174
Following gene: 229917184
Centisome position: 47.34
GC content: 52.79
Gene sequence:
>1362_bases TTGGAAACAAATAAACTAAAGCGCGAGCTGTCCACCCGGCAACTTACGATGATTTCCCTCGGGAGCGCCATCGGAACCGG GCTGTTCCTCGGAAGCGGTCTCGCGATTCAAACCGCTGGCCCGAGCGTGCTCGTCAGCTATGCCATCGGGGCGTTCATCG TCCTCTTACTAATGGGTGCTCTCGCCGAAATGACGGTCGCCCATCCAACATCCGGATCATTCGGAACGATTGCCGAGCGA TACGTTCATCCACTCGCCGGTTTTCTCGTCCGTTACTCTTACTGGGTCGCGAACGTACTGGCTGTAGGGGTTGAAGTCAG TGCCATCGCCATCTACATGCGCTACTGGTTCCCAGATGTGAACGGGTTCGTTTGGGTCGCCCTCTTCGGTGGACTACTCA TTTACGTCAACGCCCGTCACGTTCACACGTTCGGAACGACCGAATACTGGTTATCCTTCATCAAAGTAACTGCCATCATC CTATTCATCGTCCTCGGTGCCGCCACATTGTTCGGCGAACCAGGATCACCGATTGAGTCAATCACGACAGGAAACGAAGG CTTCTTCGCGTTCGGCTTTTACGGAATGTGGGTGACGATTTTCATCTCCCTCTTCAGTTTCCTTGGAACCGAACTCGTCG CTGTGACAGCGGGAGAAGCGAAAGACCCGGACCAGGCCGTACCACGCGCTTTACGCGCGACCGTGTTCCGCTTGACGTTC TTCTATGTCGTCACGCTCGCGATCATGCTCATGCTGATCCCATGGCAGCAAGCCGGGATCGACCAAAGTCCGTTCGTGCT CGTCATGGAACAGTTTGATGTCCCGTTCGCGGCAGGCATCCTCAACTTTGTGATTTTGATCGCCGCCTTGTCTGCGATGA ACGCGCAGCTTTACGCGTCGACACGTATGATGTACTCGCTCGCGGAAGCCGGCGATGCACCGAAAGCGTTCAAAAAAATC AGCAAAAATGGGATCCCGATGTTCGCGCTACTCGTTTCAACAGGCGGGATCGTCCTCGCCGCTTTGCTACAAGTATTCAT GGAGTCGTCGTATCCATTCTTGATGGGAATCTCGATGTTCGGAGCTATTTTTACTTGGTTCATGGTCTTCGTCTCCCACT TGTTCTTCCGTAAGAAATGGACTGGGCGAAAACTCCCTGTCCGCATGATGGGATATCCATTTCTCCCATTGCTCGGGGCG GTCTTACTGCTCAGCCTGATGATCACGACATGGTTCACGGATTTCAACATCTTGCTGAAATTCGGCGTACCTTGGTTGAT CGGATTGACGATCATCTATTACGTGCGTGAACAAATGCGTAAAAAACAAGATCGTCCAAGCGATATTGAACAAGCCAACT AA
Upstream 100 bases:
>100_bases AAATGAGAAACCTTCATCGATTTTTCGAATTGACATTGTTTTTTTTCGTCTGCTATAGTCGTCCACAACAACATTTCACT CAGCTAAAGGAGAATCGATT
Downstream 100 bases:
>100_bases CGAGTATCCCTTCGCAATCGCGGAGGGATTTTTTTACGCACAAAAACTCCTTTCGCAATCGAAAGGAGTTTTCTGTTTGA TGCATCAGAAGAACTGACGC
Product: amino acid permease-associated region
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 453; Mature: 453
Protein sequence:
>453_residues METNKLKRELSTRQLTMISLGSAIGTGLFLGSGLAIQTAGPSVLVSYAIGAFIVLLLMGALAEMTVAHPTSGSFGTIAER YVHPLAGFLVRYSYWVANVLAVGVEVSAIAIYMRYWFPDVNGFVWVALFGGLLIYVNARHVHTFGTTEYWLSFIKVTAII LFIVLGAATLFGEPGSPIESITTGNEGFFAFGFYGMWVTIFISLFSFLGTELVAVTAGEAKDPDQAVPRALRATVFRLTF FYVVTLAIMLMLIPWQQAGIDQSPFVLVMEQFDVPFAAGILNFVILIAALSAMNAQLYASTRMMYSLAEAGDAPKAFKKI SKNGIPMFALLVSTGGIVLAALLQVFMESSYPFLMGISMFGAIFTWFMVFVSHLFFRKKWTGRKLPVRMMGYPFLPLLGA VLLLSLMITTWFTDFNILLKFGVPWLIGLTIIYYVREQMRKKQDRPSDIEQAN
Sequences:
>Translated_453_residues METNKLKRELSTRQLTMISLGSAIGTGLFLGSGLAIQTAGPSVLVSYAIGAFIVLLLMGALAEMTVAHPTSGSFGTIAER YVHPLAGFLVRYSYWVANVLAVGVEVSAIAIYMRYWFPDVNGFVWVALFGGLLIYVNARHVHTFGTTEYWLSFIKVTAII LFIVLGAATLFGEPGSPIESITTGNEGFFAFGFYGMWVTIFISLFSFLGTELVAVTAGEAKDPDQAVPRALRATVFRLTF FYVVTLAIMLMLIPWQQAGIDQSPFVLVMEQFDVPFAAGILNFVILIAALSAMNAQLYASTRMMYSLAEAGDAPKAFKKI SKNGIPMFALLVSTGGIVLAALLQVFMESSYPFLMGISMFGAIFTWFMVFVSHLFFRKKWTGRKLPVRMMGYPFLPLLGA VLLLSLMITTWFTDFNILLKFGVPWLIGLTIIYYVREQMRKKQDRPSDIEQAN >Mature_453_residues METNKLKRELSTRQLTMISLGSAIGTGLFLGSGLAIQTAGPSVLVSYAIGAFIVLLLMGALAEMTVAHPTSGSFGTIAER YVHPLAGFLVRYSYWVANVLAVGVEVSAIAIYMRYWFPDVNGFVWVALFGGLLIYVNARHVHTFGTTEYWLSFIKVTAII LFIVLGAATLFGEPGSPIESITTGNEGFFAFGFYGMWVTIFISLFSFLGTELVAVTAGEAKDPDQAVPRALRATVFRLTF FYVVTLAIMLMLIPWQQAGIDQSPFVLVMEQFDVPFAAGILNFVILIAALSAMNAQLYASTRMMYSLAEAGDAPKAFKKI SKNGIPMFALLVSTGGIVLAALLQVFMESSYPFLMGISMFGAIFTWFMVFVSHLFFRKKWTGRKLPVRMMGYPFLPLLGA VLLLSLMITTWFTDFNILLKFGVPWLIGLTIIYYVREQMRKKQDRPSDIEQAN
Specific function: Transporter For The Intake Of S-Methylmethionine. [C]
COG id: COG1113
COG function: function code E; Gamma-aminobutyrate permease and related permeases
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the amino acid-polyamine-organocation (APC) superfamily [H]
Homologues:
Organism=Homo sapiens, GI258614003, Length=392, Percent_Identity=24.4897959183673, Blast_Score=73, Evalue=7e-13, Organism=Homo sapiens, GI258614005, Length=392, Percent_Identity=24.4897959183673, Blast_Score=72, Evalue=8e-13, Organism=Homo sapiens, GI110347453, Length=336, Percent_Identity=24.702380952381, Blast_Score=69, Evalue=9e-12, Organism=Homo sapiens, GI115648063, Length=454, Percent_Identity=24.6696035242291, Blast_Score=68, Evalue=2e-11, Organism=Homo sapiens, GI115648022, Length=454, Percent_Identity=24.6696035242291, Blast_Score=68, Evalue=2e-11, Organism=Escherichia coli, GI87081708, Length=463, Percent_Identity=38.0129589632829, Blast_Score=297, Evalue=9e-82, Organism=Escherichia coli, GI1786789, Length=409, Percent_Identity=39.6088019559902, Blast_Score=293, Evalue=2e-80, Organism=Escherichia coli, GI1786302, Length=444, Percent_Identity=35.8108108108108, Blast_Score=288, Evalue=6e-79, Organism=Escherichia coli, GI1786602, Length=457, Percent_Identity=36.7614879649891, Blast_Score=273, Evalue=2e-74, Organism=Escherichia coli, GI1788480, Length=442, Percent_Identity=37.5565610859729, Blast_Score=261, Evalue=6e-71, Organism=Escherichia coli, GI48994972, Length=461, Percent_Identity=33.1887201735358, Blast_Score=246, Evalue=2e-66, Organism=Escherichia coli, GI1790653, Length=387, Percent_Identity=34.1085271317829, Blast_Score=229, Evalue=4e-61, Organism=Escherichia coli, GI1789017, Length=404, Percent_Identity=32.9207920792079, Blast_Score=226, Evalue=3e-60, Organism=Escherichia coli, GI87081915, Length=400, Percent_Identity=32.75, Blast_Score=216, Evalue=4e-57, Organism=Saccharomyces cerevisiae, GI6320772, Length=457, Percent_Identity=30.4157549234136, Blast_Score=190, Evalue=4e-49, Organism=Saccharomyces cerevisiae, GI6324061, Length=422, Percent_Identity=31.042654028436, Blast_Score=188, Evalue=1e-48, Organism=Saccharomyces cerevisiae, GI6324990, Length=427, Percent_Identity=30.2107728337237, Blast_Score=185, Evalue=1e-47, Organism=Saccharomyces cerevisiae, GI6324924, Length=433, Percent_Identity=30.2540415704388, Blast_Score=184, Evalue=2e-47, Organism=Saccharomyces cerevisiae, GI6321629, Length=407, Percent_Identity=28.7469287469287, Blast_Score=184, Evalue=2e-47, Organism=Saccharomyces cerevisiae, GI6324553, Length=388, Percent_Identity=30.4123711340206, Blast_Score=183, Evalue=5e-47, Organism=Saccharomyces cerevisiae, GI6322892, Length=400, Percent_Identity=30.5, Blast_Score=173, Evalue=4e-44, Organism=Saccharomyces cerevisiae, GI6324059, Length=447, Percent_Identity=30.8724832214765, Blast_Score=173, Evalue=6e-44, Organism=Saccharomyces cerevisiae, GI6320251, Length=405, Percent_Identity=28.8888888888889, Blast_Score=165, Evalue=2e-41, Organism=Saccharomyces cerevisiae, GI6319824, Length=413, Percent_Identity=28.8135593220339, Blast_Score=164, Evalue=2e-41, Organism=Saccharomyces cerevisiae, GI6321053, Length=473, Percent_Identity=26.215644820296, Blast_Score=164, Evalue=2e-41, Organism=Saccharomyces cerevisiae, GI6320717, Length=405, Percent_Identity=28.3950617283951, Blast_Score=164, Evalue=4e-41, Organism=Saccharomyces cerevisiae, GI6319543, Length=407, Percent_Identity=28.2555282555283, Blast_Score=157, Evalue=4e-39, Organism=Saccharomyces cerevisiae, GI6322967, Length=393, Percent_Identity=30.2798982188295, Blast_Score=154, Evalue=2e-38, Organism=Saccharomyces cerevisiae, GI6319608, Length=444, Percent_Identity=25.4504504504505, Blast_Score=149, Evalue=7e-37, Organism=Saccharomyces cerevisiae, GI6319542, Length=402, Percent_Identity=27.1144278606965, Blast_Score=149, Evalue=1e-36, Organism=Saccharomyces cerevisiae, GI6324981, Length=389, Percent_Identity=30.3341902313625, Blast_Score=142, Evalue=2e-34, Organism=Saccharomyces cerevisiae, GI6320364, Length=483, Percent_Identity=24.4306418219462, Blast_Score=100, Evalue=9e-22, Organism=Drosophila melanogaster, GI24667468, Length=385, Percent_Identity=24.9350649350649, Blast_Score=76, Evalue=6e-14,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR004841 - InterPro: IPR002293 - InterPro: IPR004840 [H]
Pfam domain/function: PF00324 AA_permease [H]
EC number: NA
Molecular weight: Translated: 50079; Mature: 50079
Theoretical pI: Translated: 9.53; Mature: 9.53
Prosite motif: PS00027 HOMEOBOX_1 ; PS00218 AMINO_ACID_PERMEASE_1
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 4.6 %Met (Translated Protein) 4.6 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 4.6 %Met (Mature Protein) 4.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure METNKLKRELSTRQLTMISLGSAIGTGLFLGSGLAIQTAGPSVLVSYAIGAFIVLLLMGA CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEECCCHHHHHHHHHHHHHHHHHHHH LAEMTVAHPTSGSFGTIAERYVHPLAGFLVRYSYWVANVLAVGVEVSAIAIYMRYWFPDV HHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC NGFVWVALFGGLLIYVNARHVHTFGTTEYWLSFIKVTAIILFIVLGAATLFGEPGSPIES CHHHHHHHHCCHHEEEECCEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHH ITTGNEGFFAFGFYGMWVTIFISLFSFLGTELVAVTAGEAKDPDQAVPRALRATVFRLTF HCCCCCCEEEHHHHHHHHHHHHHHHHHHHHHEEEEECCCCCCCHHHHHHHHHHHHHHHHH FYVVTLAIMLMLIPWQQAGIDQSPFVLVMEQFDVPFAAGILNFVILIAALSAMNAQLYAS HHHHHHHHHHHHHCCHHCCCCCCCEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHH TRMMYSLAEAGDAPKAFKKISKNGIPMFALLVSTGGIVLAALLQVFMESSYPFLMGISMF HHHHHHHHHCCCCHHHHHHHHCCCCCHHHHHHHCCHHHHHHHHHHHHHCCCCHHHHHHHH GAIFTWFMVFVSHLFFRKKWTGRKLPVRMMGYPFLPLLGAVLLLSLMITTWFTDFNILLK HHHHHHHHHHHHHHHHHHCCCCCCCCHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH FGVPWLIGLTIIYYVREQMRKKQDRPSDIEQAN HCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCC >Mature Secondary Structure METNKLKRELSTRQLTMISLGSAIGTGLFLGSGLAIQTAGPSVLVSYAIGAFIVLLLMGA CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEECCCHHHHHHHHHHHHHHHHHHHH LAEMTVAHPTSGSFGTIAERYVHPLAGFLVRYSYWVANVLAVGVEVSAIAIYMRYWFPDV HHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC NGFVWVALFGGLLIYVNARHVHTFGTTEYWLSFIKVTAIILFIVLGAATLFGEPGSPIES CHHHHHHHHCCHHEEEECCEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHH ITTGNEGFFAFGFYGMWVTIFISLFSFLGTELVAVTAGEAKDPDQAVPRALRATVFRLTF HCCCCCCEEEHHHHHHHHHHHHHHHHHHHHHEEEEECCCCCCCHHHHHHHHHHHHHHHHH FYVVTLAIMLMLIPWQQAGIDQSPFVLVMEQFDVPFAAGILNFVILIAALSAMNAQLYAS HHHHHHHHHHHHHCCHHCCCCCCCEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHH TRMMYSLAEAGDAPKAFKKISKNGIPMFALLVSTGGIVLAALLQVFMESSYPFLMGISMF HHHHHHHHHCCCCHHHHHHHHCCCCCHHHHHHHCCHHHHHHHHHHHHHCCCCHHHHHHHH GAIFTWFMVFVSHLFFRKKWTGRKLPVRMMGYPFLPLLGAVLLLSLMITTWFTDFNILLK HHHHHHHHHHHHHHHHHHCCCCCCCCHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH FGVPWLIGLTIIYYVREQMRKKQDRPSDIEQAN HCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 7704263; 9384377; 8550462; 8867804 [H]