Definition Exiguobacterium sp. AT1b, complete genome.
Accession NC_012673
Length 2,999,895

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The map label for this gene is yshE [H]

Identifier: 229917140

GI number: 229917140

Start: 1385209

End: 1385622

Strand: Direct

Name: yshE [H]

Synonym: EAT1b_1414

Alternate gene names: 229917140

Gene position: 1385209-1385622 (Clockwise)

Preceding gene: 229917139

Following gene: 229917141

Centisome position: 46.18

GC content: 50.48

Gene sequence:

>414_bases
ATGACATTCATCACACTCGATTCAATCTTAAGCTTCCTGGCCCACCTCGGGACAGGATTCGGTCTCATTCTCGCGGGACT
CATCATCTTCGCACTAACGACCAAATATTCGGAACGCAAGTTAATCAAAGAAGGCAACATGGCTGTCGCGTTGAAACTTT
GGGGGAAAGCACTAGGACTCGCCATCGTCATTTATACAGTCTGGGCGAACAGCGTCAACTTGCTCGATGCGTTCATCTGG
GGACTCGTCGGTATCGCCGCCCAAGTATTGGCGTTCTGGACGTTTGAATACATCCTTACACCAGGCGTGAATTTAGAAAA
AGAAGTCGAGAATGGCAACATGGCCATCGGTTTCAGCTTGTTCGCCGCATCACTCGTCGTCGGGATCATCGTCGCCGCGA
GCTTGACGTACTAA

Upstream 100 bases:

>100_bases
GACACCCATCCGCACTCGGCGTCCGCGCCGGCAGCATGATCACGAACAACCAATCTTATTACTTAGCCGTTGGCACACCT
ATACAAAAGGAGACGAACTC

Downstream 100 bases:

>100_bases
TCAAACACCCCATGCACGCATTTGCGAAGCATGGGGTGTTCGTATTTATAAAAGTCAGGAGGAACAATCATGTCGAAGCG
AATCATCTTACTCACAATCG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 137; Mature: 136

Protein sequence:

>137_residues
MTFITLDSILSFLAHLGTGFGLILAGLIIFALTTKYSERKLIKEGNMAVALKLWGKALGLAIVIYTVWANSVNLLDAFIW
GLVGIAAQVLAFWTFEYILTPGVNLEKEVENGNMAIGFSLFAASLVVGIIVAASLTY

Sequences:

>Translated_137_residues
MTFITLDSILSFLAHLGTGFGLILAGLIIFALTTKYSERKLIKEGNMAVALKLWGKALGLAIVIYTVWANSVNLLDAFIW
GLVGIAAQVLAFWTFEYILTPGVNLEKEVENGNMAIGFSLFAASLVVGIIVAASLTY
>Mature_136_residues
TFITLDSILSFLAHLGTGFGLILAGLIIFALTTKYSERKLIKEGNMAVALKLWGKALGLAIVIYTVWANSVNLLDAFIWG
LVGIAAQVLAFWTFEYILTPGVNLEKEVENGNMAIGFSLFAASLVVGIIVAASLTY

Specific function: Unknown

COG id: COG3766

COG function: function code S; Predicted membrane protein

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0719 family [H]

Homologues:

Organism=Escherichia coli, GI1790627, Length=132, Percent_Identity=31.8181818181818, Blast_Score=61, Evalue=2e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR007140 [H]

Pfam domain/function: PF03994 DUF350 [H]

EC number: NA

Molecular weight: Translated: 14745; Mature: 14614

Theoretical pI: Translated: 5.77; Mature: 5.77

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
2.2 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.5 %Met     (Mature Protein)
1.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTFITLDSILSFLAHLGTGFGLILAGLIIFALTTKYSERKLIKEGNMAVALKLWGKALGL
CCEEEHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCHHHHHHHHCCCEEEHHHHHHHHHHH
AIVIYTVWANSVNLLDAFIWGLVGIAAQVLAFWTFEYILTPGVNLEKEVENGNMAIGFSL
HHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHCCCCEEEHHHH
FAASLVVGIIVAASLTY
HHHHHHHHHHHHHHCCC
>Mature Secondary Structure 
TFITLDSILSFLAHLGTGFGLILAGLIIFALTTKYSERKLIKEGNMAVALKLWGKALGL
CEEEHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCHHHHHHHHCCCEEEHHHHHHHHHHH
AIVIYTVWANSVNLLDAFIWGLVGIAAQVLAFWTFEYILTPGVNLEKEVENGNMAIGFSL
HHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHCCCCEEEHHHH
FAASLVVGIIVAASLTY
HHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 8969504; 9384377 [H]