| Definition | Exiguobacterium sp. AT1b, complete genome. |
|---|---|
| Accession | NC_012673 |
| Length | 2,999,895 |
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The map label for this gene is yqeW [H]
Identifier: 229917124
GI number: 229917124
Start: 1368173
End: 1369759
Strand: Reverse
Name: yqeW [H]
Synonym: EAT1b_1398
Alternate gene names: 229917124
Gene position: 1369759-1368173 (Counterclockwise)
Preceding gene: 229917125
Following gene: 229917122
Centisome position: 45.66
GC content: 51.04
Gene sequence:
>1587_bases ATGGAGATTGCGACACTGATTGGTGGAATCGGAATTTTTTTACTCGGGATGACGTTACTGACAGATACGCTCAAAAAATG GGCGGGAACACGATTGCGTCATCGGTTGAATCAATTCACCGACGGCTCTTTGTCAGGGGCGACTCTCGGCGCAATGCTGA CGACCCTGTTTCAATCTTCCTCGGTGACGACACTGATGACGATTGGGTTTGTGAGCGCGGGGCTCCTGACATTCACGCAA TCGTTACCTCTTGTCATTGGAGCCAATGTAGGAAGTGCGACGACGGGATGGATCATTGCCATCCTCGGCTATAACTTAGA CGTGCGCCAGTTGTTTCTGCCGCTCATTGGAATCGGGATGGCGTTTCGTCTCTCTCGTCCACGCCTTCGCCGTGTGGGAC TGTTGCTCGTGAGTATCGGTTTGATTTTTGTTGGGATTGGGACACTTCAAGAAGCGATGCGGGATGTCGTCACGTTCTCG TTTGGCTCGGCCGGTGAGATGACCGTTCTGCATCAGGCACTTCTGATTGGAATCGGATTTATGATGACCGCTGTCCTTCA GTCATCGACGATTGGACTCGTGTTAACGATGACGGCTCTCGCGACGGCGGCGATTTCACTCCCGCAAGCCGCTTATTTGG TGCTCGGTCAGAGTGCGGGGACGAGCCTCGTCGTGGCACTCGGTTCAATCGGAGGATGGAAGTCAGCCCGACGCATTGTA TTGGGGCATGCCATCTACCACGTGTCGATTGTCCTCATCGGATGGTTGACGTTCCCCGTTCTCTTCGAGGTCGTCAATCG AGTAGCCGATTGGTTCAACTGGAACGACTTATTACGTCTCGCCTTATTCCATACGACATTCCATCTACTAGGTGTGATCT TATTCCTACCATTTTATCAAACATTCGCACGTCGATTACTGAAGTGGATTCCGAGTCGCTCCGAAAAATTGACACGTCTG CTCGATAAAAACATGTCACAACTCCCGACCGTTGCTCTTGAAGCGGCACGACGTTCCTTACTTGAAATCGAACGTTATTT AGGGAACGAGACCGAGTTGCTCGTCCGTGAGGGACGTCTTCGTGAAGATGAATTGACGCTCGTCGACAAGACGTTGAGCG ATGTCCGTGTCTTTTTGAGCACGATACGTCTTGAAGATGAAGGAAAGCAAAATGATTATGGGCAACATCTATCCCTTTTG CATACGATCGATCATCTGGAGCGCTGGTTATATGTCTTGCGAGAAGTCGAACCGGTCCACGCCCTTCGGGACACCGACTT TTTAGCGGCACGAGAACTCGTGTTGCATGAGCTTGACCTTGTGAATCAACTGAATCATCATACGCCACCAGAGGATTCGA AGCTGTGGAAACAGGCCTCAAAACAACTAGCGGAGTATCGGAAAGCACATCGTTCGGAGATGTTAGAAGAGACGGCAGCG AACCAATTGGAGATGGACCAGACGATACAAAAAGTACAAGTATTGCTCTGGCTCGACCGTATCGGCTACCACATCTGGCG AGCCACACGTCACTTGATTAAGCCGACCGTACCGAGTGAACGGTTCGACGTGAACCGAGAAGACTAG
Upstream 100 bases:
>100_bases CCGGAAGATGTGTTATTGAATTTAAAAGATTATGCGAATGAAAAATCGTGGATTTTATCGACATTGAAGGACGATTAAAC ACGCGAAGGGGCGTGACACG
Downstream 100 bases:
>100_bases AACAAAAAACGGACTCCATATCAGGAGTCCGTTCGTCGCTTACTTCTTATCTGCGTGCATCACACCGGCTTGTCCGTAAT GTGTCGCATCCATCTCTTCG
Product: Na+/Picotransporter
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 528; Mature: 528
Protein sequence:
>528_residues MEIATLIGGIGIFLLGMTLLTDTLKKWAGTRLRHRLNQFTDGSLSGATLGAMLTTLFQSSSVTTLMTIGFVSAGLLTFTQ SLPLVIGANVGSATTGWIIAILGYNLDVRQLFLPLIGIGMAFRLSRPRLRRVGLLLVSIGLIFVGIGTLQEAMRDVVTFS FGSAGEMTVLHQALLIGIGFMMTAVLQSSTIGLVLTMTALATAAISLPQAAYLVLGQSAGTSLVVALGSIGGWKSARRIV LGHAIYHVSIVLIGWLTFPVLFEVVNRVADWFNWNDLLRLALFHTTFHLLGVILFLPFYQTFARRLLKWIPSRSEKLTRL LDKNMSQLPTVALEAARRSLLEIERYLGNETELLVREGRLREDELTLVDKTLSDVRVFLSTIRLEDEGKQNDYGQHLSLL HTIDHLERWLYVLREVEPVHALRDTDFLAARELVLHELDLVNQLNHHTPPEDSKLWKQASKQLAEYRKAHRSEMLEETAA NQLEMDQTIQKVQVLLWLDRIGYHIWRATRHLIKPTVPSERFDVNRED
Sequences:
>Translated_528_residues MEIATLIGGIGIFLLGMTLLTDTLKKWAGTRLRHRLNQFTDGSLSGATLGAMLTTLFQSSSVTTLMTIGFVSAGLLTFTQ SLPLVIGANVGSATTGWIIAILGYNLDVRQLFLPLIGIGMAFRLSRPRLRRVGLLLVSIGLIFVGIGTLQEAMRDVVTFS FGSAGEMTVLHQALLIGIGFMMTAVLQSSTIGLVLTMTALATAAISLPQAAYLVLGQSAGTSLVVALGSIGGWKSARRIV LGHAIYHVSIVLIGWLTFPVLFEVVNRVADWFNWNDLLRLALFHTTFHLLGVILFLPFYQTFARRLLKWIPSRSEKLTRL LDKNMSQLPTVALEAARRSLLEIERYLGNETELLVREGRLREDELTLVDKTLSDVRVFLSTIRLEDEGKQNDYGQHLSLL HTIDHLERWLYVLREVEPVHALRDTDFLAARELVLHELDLVNQLNHHTPPEDSKLWKQASKQLAEYRKAHRSEMLEETAA NQLEMDQTIQKVQVLLWLDRIGYHIWRATRHLIKPTVPSERFDVNRED >Mature_528_residues MEIATLIGGIGIFLLGMTLLTDTLKKWAGTRLRHRLNQFTDGSLSGATLGAMLTTLFQSSSVTTLMTIGFVSAGLLTFTQ SLPLVIGANVGSATTGWIIAILGYNLDVRQLFLPLIGIGMAFRLSRPRLRRVGLLLVSIGLIFVGIGTLQEAMRDVVTFS FGSAGEMTVLHQALLIGIGFMMTAVLQSSTIGLVLTMTALATAAISLPQAAYLVLGQSAGTSLVVALGSIGGWKSARRIV LGHAIYHVSIVLIGWLTFPVLFEVVNRVADWFNWNDLLRLALFHTTFHLLGVILFLPFYQTFARRLLKWIPSRSEKLTRL LDKNMSQLPTVALEAARRSLLEIERYLGNETELLVREGRLREDELTLVDKTLSDVRVFLSTIRLEDEGKQNDYGQHLSLL HTIDHLERWLYVLREVEPVHALRDTDFLAARELVLHELDLVNQLNHHTPPEDSKLWKQASKQLAEYRKAHRSEMLEETAA NQLEMDQTIQKVQVLLWLDRIGYHIWRATRHLIKPTVPSERFDVNRED
Specific function: Unknown
COG id: COG1283
COG function: function code P; Na+/phosphate symporter
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: To E.coli yjbB [H]
Homologues:
Organism=Escherichia coli, GI1790451, Length=398, Percent_Identity=28.1407035175879, Blast_Score=81, Evalue=2e-16,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003841 - InterPro: IPR004633 [H]
Pfam domain/function: PF02690 Na_Pi_cotrans [H]
EC number: NA
Molecular weight: Translated: 59201; Mature: 59201
Theoretical pI: Translated: 9.16; Mature: 9.16
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.5 %Met (Translated Protein) 2.5 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.5 %Met (Mature Protein) 2.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MEIATLIGGIGIFLLGMTLLTDTLKKWAGTRLRHRLNQFTDGSLSGATLGAMLTTLFQSS CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHCCC SVTTLMTIGFVSAGLLTFTQSLPLVIGANVGSATTGWIIAILGYNLDVRQLFLPLIGIGM CHHHHHHHHHHHHHHHHHHHCCCEEEECCCCCCCHHHHHHHHCCCCCHHHHHHHHHHHHH AFRLSRPRLRRVGLLLVSIGLIFVGIGTLQEAMRDVVTFSFGSAGEMTVLHQALLIGIGF HHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHH MMTAVLQSSTIGLVLTMTALATAAISLPQAAYLVLGQSAGTSLVVALGSIGGWKSARRIV HHHHHHHCCCHHHHHHHHHHHHHHHHCCCHHHHEEECCCCCCHHHHHHCCCCHHHHHHHH LGHAIYHVSIVLIGWLTFPVLFEVVNRVADWFNWNDLLRLALFHTTFHLLGVILFLPFYQ HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHH TFARRLLKWIPSRSEKLTRLLDKNMSQLPTVALEAARRSLLEIERYLGNETELLVREGRL HHHHHHHHHCCCHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHCCCC REDELTLVDKTLSDVRVFLSTIRLEDEGKQNDYGQHLSLLHTIDHLERWLYVLREVEPVH CCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCHHH ALRDTDFLAARELVLHELDLVNQLNHHTPPEDSKLWKQASKQLAEYRKAHRSEMLEETAA HHHCCHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH NQLEMDQTIQKVQVLLWLDRIGYHIWRATRHLIKPTVPSERFDVNRED HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCC >Mature Secondary Structure MEIATLIGGIGIFLLGMTLLTDTLKKWAGTRLRHRLNQFTDGSLSGATLGAMLTTLFQSS CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHCCC SVTTLMTIGFVSAGLLTFTQSLPLVIGANVGSATTGWIIAILGYNLDVRQLFLPLIGIGM CHHHHHHHHHHHHHHHHHHHCCCEEEECCCCCCCHHHHHHHHCCCCCHHHHHHHHHHHHH AFRLSRPRLRRVGLLLVSIGLIFVGIGTLQEAMRDVVTFSFGSAGEMTVLHQALLIGIGF HHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHH MMTAVLQSSTIGLVLTMTALATAAISLPQAAYLVLGQSAGTSLVVALGSIGGWKSARRIV HHHHHHHCCCHHHHHHHHHHHHHHHHCCCHHHHEEECCCCCCHHHHHHCCCCHHHHHHHH LGHAIYHVSIVLIGWLTFPVLFEVVNRVADWFNWNDLLRLALFHTTFHLLGVILFLPFYQ HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHH TFARRLLKWIPSRSEKLTRLLDKNMSQLPTVALEAARRSLLEIERYLGNETELLVREGRL HHHHHHHHHCCCHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHCCCC REDELTLVDKTLSDVRVFLSTIRLEDEGKQNDYGQHLSLLHTIDHLERWLYVLREVEPVH CCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCHHH ALRDTDFLAARELVLHELDLVNQLNHHTPPEDSKLWKQASKQLAEYRKAHRSEMLEETAA HHHCCHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH NQLEMDQTIQKVQVLLWLDRIGYHIWRATRHLIKPTVPSERFDVNRED HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 8969508; 9023197; 9384377 [H]