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The map label for this gene is ypfJ [H]

Identifier: 229917122

GI number: 229917122

Start: 1366942

End: 1367796

Strand: Reverse

Name: ypfJ [H]

Synonym: EAT1b_1396

Alternate gene names: 229917122

Gene position: 1367796-1366942 (Counterclockwise)

Preceding gene: 229917124

Following gene: 229917121

Centisome position: 45.59

GC content: 53.1

Gene sequence:

>855_bases
ATGAAGTGGAAAGGAAGACAACAGAGCCGGAACGTCGAGGATCGACGTGGGCGTAGCATCGGAGGAAAAGGGATTGCCGG
GGTCGGGGGTGGTCTCGGATTGATTCTCGTCATCGTCTTTACATTATTGAATGGGGGAAGCCCGACCGATCTCGTCAACA
ACATCGGAATCGGGGAACCTCAATCGGAGGGGACGTATACGGGAACGGCTCGTGAAGAGGAGATGGCAGACTTCGTAGCG
GTCGTCTTGAAGGATACGGAAGAAGTGTGGACAGACATCTTCGCTGAAAACGGGATGACCTATGAAGAGCCTACGCTCGT
CCTATTTTCCGGACAGGTTGAATCCGCTTGTGGTATTGCCGGCTCCGCTGTGGGTCCTTTCTATTGTCCCGGCGACCAAA
AACTATATATCGATTTGAGTTTTTATGATGAATTGAGTCAACGTTTCAATGCACCAGGGGATTTCGCGATGGCTTATGTT
GTCGCCCATGAGGTCGGGCATCATGTCCAAACGCTTCTCGGGACGACAGAAGAAATCATGCCGCTTCGGAACGAGATGAG
CGAGACCGAATTCAATCGCTATCTCGTCCGCTTCGAGTTGCAGGCGGACTACTATGCAGGCGTATGGGCCCATCACGCGC
AAGGGTTAGGGTATCTTGAAGCGGGAGACGTGGAAGAAGCGATGAATGCCGCGCATCAGATTGGCGATGACACGCTGCAA
CGTCAGGCGCGTGGATATGTGACGCCAGACTCGTTCACGCATGGGACGTCGGAACAACGCATGCGGTGGTTCGAGAGAGG
GTTTGAGAACGGATCGATTCAAGGAGGCGACACGTTCAATACGAACAACTTATAG

Upstream 100 bases:

>100_bases
TCCTCTAGAAAAGAAAATTCTCATCTACAGAGAAACATGAGCTCACTTTTACCGAATTTGGGGTAATAAACAAGACAGAG
CGAATGTAGGAGGAATCGGG

Downstream 100 bases:

>100_bases
ATCGGGCGTACGCTCGATCTTTTTAGGTGATTGGAATATGGGGAAGGAATCCGCTATCATAAAAGAACAACAGTTGCAGG
AAGGGGATGACCAAATGGAA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 284; Mature: 284

Protein sequence:

>284_residues
MKWKGRQQSRNVEDRRGRSIGGKGIAGVGGGLGLILVIVFTLLNGGSPTDLVNNIGIGEPQSEGTYTGTAREEEMADFVA
VVLKDTEEVWTDIFAENGMTYEEPTLVLFSGQVESACGIAGSAVGPFYCPGDQKLYIDLSFYDELSQRFNAPGDFAMAYV
VAHEVGHHVQTLLGTTEEIMPLRNEMSETEFNRYLVRFELQADYYAGVWAHHAQGLGYLEAGDVEEAMNAAHQIGDDTLQ
RQARGYVTPDSFTHGTSEQRMRWFERGFENGSIQGGDTFNTNNL

Sequences:

>Translated_284_residues
MKWKGRQQSRNVEDRRGRSIGGKGIAGVGGGLGLILVIVFTLLNGGSPTDLVNNIGIGEPQSEGTYTGTAREEEMADFVA
VVLKDTEEVWTDIFAENGMTYEEPTLVLFSGQVESACGIAGSAVGPFYCPGDQKLYIDLSFYDELSQRFNAPGDFAMAYV
VAHEVGHHVQTLLGTTEEIMPLRNEMSETEFNRYLVRFELQADYYAGVWAHHAQGLGYLEAGDVEEAMNAAHQIGDDTLQ
RQARGYVTPDSFTHGTSEQRMRWFERGFENGSIQGGDTFNTNNL
>Mature_284_residues
MKWKGRQQSRNVEDRRGRSIGGKGIAGVGGGLGLILVIVFTLLNGGSPTDLVNNIGIGEPQSEGTYTGTAREEEMADFVA
VVLKDTEEVWTDIFAENGMTYEEPTLVLFSGQVESACGIAGSAVGPFYCPGDQKLYIDLSFYDELSQRFNAPGDFAMAYV
VAHEVGHHVQTLLGTTEEIMPLRNEMSETEFNRYLVRFELQADYYAGVWAHHAQGLGYLEAGDVEEAMNAAHQIGDDTLQ
RQARGYVTPDSFTHGTSEQRMRWFERGFENGSIQGGDTFNTNNL

Specific function: Unknown

COG id: COG2321

COG function: function code R; Predicted metalloprotease

Gene ontology:

Cell location: Membrane; Single-pass membrane protein (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI1788819, Length=293, Percent_Identity=47.4402730375427, Blast_Score=267, Evalue=5e-73,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR007343 [H]

Pfam domain/function: PF04228 Zn_peptidase [H]

EC number: NA

Molecular weight: Translated: 31272; Mature: 31272

Theoretical pI: Translated: 4.32; Mature: 4.32

Prosite motif: PS00142 ZINC_PROTEASE

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
2.8 %Met     (Translated Protein)
3.5 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
2.8 %Met     (Mature Protein)
3.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKWKGRQQSRNVEDRRGRSIGGKGIAGVGGGLGLILVIVFTLLNGGSPTDLVNNIGIGEP
CCCCCCCCCCCCHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCHHHHHHHCCCCCC
QSEGTYTGTAREEEMADFVAVVLKDTEEVWTDIFAENGMTYEEPTLVLFSGQVESACGIA
CCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEEECCCCHHHCCC
GSAVGPFYCPGDQKLYIDLSFYDELSQRFNAPGDFAMAYVVAHEVGHHVQTLLGTTEEIM
CCCCCCEECCCCCEEEEEEHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHCCHHHHH
PLRNEMSETEFNRYLVRFELQADYYAGVWAHHAQGLGYLEAGDVEEAMNAAHQIGDDTLQ
HHHHHHHHHHHHEEEEEEEECCCHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHCCHHHHH
RQARGYVTPDSFTHGTSEQRMRWFERGFENGSIQGGDTFNTNNL
HHHCCCCCCCCCCCCCHHHHHHHHHCCCCCCCCCCCCCCCCCCC
>Mature Secondary Structure
MKWKGRQQSRNVEDRRGRSIGGKGIAGVGGGLGLILVIVFTLLNGGSPTDLVNNIGIGEP
CCCCCCCCCCCCHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCHHHHHHHCCCCCC
QSEGTYTGTAREEEMADFVAVVLKDTEEVWTDIFAENGMTYEEPTLVLFSGQVESACGIA
CCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEEECCCCHHHCCC
GSAVGPFYCPGDQKLYIDLSFYDELSQRFNAPGDFAMAYVVAHEVGHHVQTLLGTTEEIM
CCCCCCEECCCCCEEEEEEHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHCCHHHHH
PLRNEMSETEFNRYLVRFELQADYYAGVWAHHAQGLGYLEAGDVEEAMNAAHQIGDDTLQ
HHHHHHHHHHHHEEEEEEEECCCHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHCCHHHHH
RQARGYVTPDSFTHGTSEQRMRWFERGFENGSIQGGDTFNTNNL
HHHCCCCCCCCCCCCCHHHHHHHHHCCCCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 11206551; 11258796 [H]