| Definition | Exiguobacterium sp. AT1b, complete genome. |
|---|---|
| Accession | NC_012673 |
| Length | 2,999,895 |
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The map label for this gene is 229917106
Identifier: 229917106
GI number: 229917106
Start: 1351726
End: 1352682
Strand: Reverse
Name: 229917106
Synonym: EAT1b_1380
Alternate gene names: NA
Gene position: 1352682-1351726 (Counterclockwise)
Preceding gene: 229917107
Following gene: 229917104
Centisome position: 45.09
GC content: 49.53
Gene sequence:
>957_bases ATGGAATTGTTTTTATTTTTATTGACGAGCGCCCCGGTACTACTGTTTGTGACGGGCGTTATCGCCGCGGTCGGAAAATC AAACTTAAAGATCCCGGATTCATTGAGTACGACGCTCAATATTTACTTACTGCTTGCTATCGGACTGAAGGGAGGTATGG GACTCGCCTCGGTATCTTTTGAAGACATCGCATTACCGCTGACCGTGACGCTGTTGATTGGGATTTTGCTACCGCTTCTC GCGTTCTATGTCGGAGGAATGTTCAAATTCTCATTCCCCGAGCGAATTGCCATGGCTGCGACGTTCGGATCGGTGTCACT CGTCACCTATGTGGCCGCGTCGACACAGCTCGAACGTCTCGGGATTGCATATGAACCGTTCATGACGACATTGGTCGTCG TCCTTGAAATCCCCGGTCTGATTGTGGCGTTGCTCCTATATAATCAGACACACGTGATGGGAATCACGGCTACGTCAGGG AAGGCGAACTCTCTATCTGTGCTACGGGAGAGTTTGTTCTCGAAAAGCATCCTCTTGATGTTTGCAGGTCTGATTGTTGG ACTGGTGACACCAGACGCCACACCGCTCAAACCATTTTTCGTCGACTTGTTCCCAGGCGTGTTACTCCTTTTCTTATTAG GTCTAGGGGTAAAAGTCGGACAGCAATTGAAAACGGTCCCGTCATATGGACTGAAATTTATGATGATGGGGATGGTGTTT CCGTTAGTCGGGGCGCTTGTCGGCTTTATTGCAGCGGGAATCGCCAATTTATCTGACGGAGGAACGATTCTCTTGATGAC ACTCGCAGCGAGTGGATCGTATATCGCCGCTCCCGCCATGTTACAAGCCTCGGTCCCAGAAGCGAAACCATCATTTTATT TGACCCTTTCGCTAGCTGTCACGTTCCCGTTCAACCTGTTAGTTGGAATCCCGCTATACATTGCGATCGTCACATGA
Upstream 100 bases:
>100_bases CCGACAGTTGTCGGCCTGACGGAGCGATCATTCGAGCCGTCGGCATACAGCGCACGCCTTCTTTAGGTGTGCGCTTTTTT GTCGCCAAGGAGGAAGATGT
Downstream 100 bases:
>100_bases AAAAAGCGTCGACTCGAAAAGAGTCGGCGCTTTTTGTATGAGTTCATCTGTATGGATTACTGTTTTACTTTTTGTTCCTC CATACATTTTAAAGCAGCCG
Product: hypothetical protein
Products: NA
Alternate protein names: Sodium-Dependent Bicarbonate Transporter; Sodium Bicarbonate Cotransporter; SBT Type Permease Sodium-Bicarbonate; Conserved Domain Protein; Permease-Like Protein
Number of amino acids: Translated: 318; Mature: 318
Protein sequence:
>318_residues MELFLFLLTSAPVLLFVTGVIAAVGKSNLKIPDSLSTTLNIYLLLAIGLKGGMGLASVSFEDIALPLTVTLLIGILLPLL AFYVGGMFKFSFPERIAMAATFGSVSLVTYVAASTQLERLGIAYEPFMTTLVVVLEIPGLIVALLLYNQTHVMGITATSG KANSLSVLRESLFSKSILLMFAGLIVGLVTPDATPLKPFFVDLFPGVLLLFLLGLGVKVGQQLKTVPSYGLKFMMMGMVF PLVGALVGFIAAGIANLSDGGTILLMTLAASGSYIAAPAMLQASVPEAKPSFYLTLSLAVTFPFNLLVGIPLYIAIVT
Sequences:
>Translated_318_residues MELFLFLLTSAPVLLFVTGVIAAVGKSNLKIPDSLSTTLNIYLLLAIGLKGGMGLASVSFEDIALPLTVTLLIGILLPLL AFYVGGMFKFSFPERIAMAATFGSVSLVTYVAASTQLERLGIAYEPFMTTLVVVLEIPGLIVALLLYNQTHVMGITATSG KANSLSVLRESLFSKSILLMFAGLIVGLVTPDATPLKPFFVDLFPGVLLLFLLGLGVKVGQQLKTVPSYGLKFMMMGMVF PLVGALVGFIAAGIANLSDGGTILLMTLAASGSYIAAPAMLQASVPEAKPSFYLTLSLAVTFPFNLLVGIPLYIAIVT >Mature_318_residues MELFLFLLTSAPVLLFVTGVIAAVGKSNLKIPDSLSTTLNIYLLLAIGLKGGMGLASVSFEDIALPLTVTLLIGILLPLL AFYVGGMFKFSFPERIAMAATFGSVSLVTYVAASTQLERLGIAYEPFMTTLVVVLEIPGLIVALLLYNQTHVMGITATSG KANSLSVLRESLFSKSILLMFAGLIVGLVTPDATPLKPFFVDLFPGVLLLFLLGLGVKVGQQLKTVPSYGLKFMMMGMVF PLVGALVGFIAAGIANLSDGGTILLMTLAASGSYIAAPAMLQASVPEAKPSFYLTLSLAVTFPFNLLVGIPLYIAIVT
Specific function: Unknown
COG id: COG3329
COG function: function code R; Predicted permease
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 33466; Mature: 33466
Theoretical pI: Translated: 8.71; Mature: 8.71
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 4.1 %Met (Translated Protein) 4.1 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 4.1 %Met (Mature Protein) 4.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MELFLFLLTSAPVLLFVTGVIAAVGKSNLKIPDSLSTTLNIYLLLAIGLKGGMGLASVSF CHHEEEEHHHCHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHEECCCCCCCEEECCH EDIALPLTVTLLIGILLPLLAFYVGGMFKFSFPERIAMAATFGSVSLVTYVAASTQLERL HHHHHHHHHHHHHHHHHHHHHHHHCCCEEECCHHHHHHHHHCCHHHHHHHHHHHHHHHHH GIAYEPFMTTLVVVLEIPGLIVALLLYNQTHVMGITATSGKANSLSVLRESLFSKSILLM CCCHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEEECCCCCHHHHHHHHHHHHHHHHHH FAGLIVGLVTPDATPLKPFFVDLFPGVLLLFLLGLGVKVGQQLKTVPSYGLKFMMMGMVF HHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHH PLVGALVGFIAAGIANLSDGGTILLMTLAASGSYIAAPAMLQASVPEAKPSFYLTLSLAV HHHHHHHHHHHHHHCCCCCCCEEEEEEEECCCCEEECCHHHHCCCCCCCCCEEEEEEEEE TFPFNLLVGIPLYIAIVT HHHHHHHHHCHHEEEEEC >Mature Secondary Structure MELFLFLLTSAPVLLFVTGVIAAVGKSNLKIPDSLSTTLNIYLLLAIGLKGGMGLASVSF CHHEEEEHHHCHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHEECCCCCCCEEECCH EDIALPLTVTLLIGILLPLLAFYVGGMFKFSFPERIAMAATFGSVSLVTYVAASTQLERL HHHHHHHHHHHHHHHHHHHHHHHHCCCEEECCHHHHHHHHHCCHHHHHHHHHHHHHHHHH GIAYEPFMTTLVVVLEIPGLIVALLLYNQTHVMGITATSGKANSLSVLRESLFSKSILLM CCCHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEEECCCCCHHHHHHHHHHHHHHHHHH FAGLIVGLVTPDATPLKPFFVDLFPGVLLLFLLGLGVKVGQQLKTVPSYGLKFMMMGMVF HHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHH PLVGALVGFIAAGIANLSDGGTILLMTLAASGSYIAAPAMLQASVPEAKPSFYLTLSLAV HHHHHHHHHHHHHHCCCCCCCEEEEEEEECCCCEEECCHHHHCCCCCCCCCEEEEEEEEE TFPFNLLVGIPLYIAIVT HHHHHHHHHCHHEEEEEC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA