Click here to switch to the map view.

The map label for this gene is atpF [H]

Identifier: 229917039

GI number: 229917039

Start: 1289043

End: 1289570

Strand: Reverse

Name: atpF [H]

Synonym: EAT1b_1313

Alternate gene names: 229917039

Gene position: 1289570-1289043 (Counterclockwise)

Preceding gene: 229917040

Following gene: 229917038

Centisome position: 42.99

GC content: 50.0

Gene sequence:

>528_bases
ATGGATACGATGATGATTGCAGCTGGTGCTGGCGGCGAAGGCCTCCGCATTCTGGATATGATCTTTACAATTTTCACATT
CCTCGTACTCTTGGCCCTGTTGAAGAAATTTGCTTGGGGACCACTCCTTGGAATGATGAGACAGCGTGAAGAGTATGTAG
CGAACGAAATTGAACTCGCTGAAAAGAGCCGCAAAGATGCGGAACATTATGTCGTTGAACAACGTGACGCACTCAGTGCA
GCACGTACTGAGTCAAAAGAAATGCTCGACGCAAGCCGTCGACAAGCAGAAGCAGAACAAGCACGCTTGGTGGAGCAGGC
GCGTTTGGAAGCCGAACAAATTAAAATCGAGGCAGAGAAAGCGATTGAGCGTGAGCGTGAGCTTGCGAAACAATCTCTTC
AAACGGAAGTCGTCACACAGGCGCTTTCGGCAGCACGCCACGTCCTTCAATCAGACCTTAAAGGCGATGAAGCGAAACAA
CGTGCCCTCGTCACAGACTTCCTGTCTAAAGCGAAAGGTGCGAACTGA

Upstream 100 bases:

>100_bases
CTGTCGGTTTCCTTCTCCTCAACTCTTGATTCCGAGTTAACGAGAATAGCATGAGAGGGAGCACGTCTCCCTCACTTATT
TAGTCAAGAGGAGGGTATGC

Downstream 100 bases:

>100_bases
TGAACGCATCACTAGCAAAACGCTATGCCAAAGCGCTCTTCGACTTAGCGCGGGAACAAGGCACGCTCGACCAAGTCGAA
GCGGAAGTGCGTCTGCTCGA

Product: ATP synthase F0, B subunit

Products: ADP; phosphate; H+

Alternate protein names: ATP synthase F(0) sector subunit b; ATPase subunit I; F-type ATPase subunit b; F-ATPase subunit b [H]

Number of amino acids: Translated: 175; Mature: 175

Protein sequence:

>175_residues
MDTMMIAAGAGGEGLRILDMIFTIFTFLVLLALLKKFAWGPLLGMMRQREEYVANEIELAEKSRKDAEHYVVEQRDALSA
ARTESKEMLDASRRQAEAEQARLVEQARLEAEQIKIEAEKAIERERELAKQSLQTEVVTQALSAARHVLQSDLKGDEAKQ
RALVTDFLSKAKGAN

Sequences:

>Translated_175_residues
MDTMMIAAGAGGEGLRILDMIFTIFTFLVLLALLKKFAWGPLLGMMRQREEYVANEIELAEKSRKDAEHYVVEQRDALSA
ARTESKEMLDASRRQAEAEQARLVEQARLEAEQIKIEAEKAIERERELAKQSLQTEVVTQALSAARHVLQSDLKGDEAKQ
RALVTDFLSKAKGAN
>Mature_175_residues
MDTMMIAAGAGGEGLRILDMIFTIFTFLVLLALLKKFAWGPLLGMMRQREEYVANEIELAEKSRKDAEHYVVEQRDALSA
ARTESKEMLDASRRQAEAEQARLVEQARLEAEQIKIEAEKAIERERELAKQSLQTEVVTQALSAARHVLQSDLKGDEAKQ
RALVTDFLSKAKGAN

Specific function: Component of the F(0) channel, it forms part of the peripheral stalk, linking F(1) to F(0) [H]

COG id: COG0711

COG function: function code C; F0F1-type ATP synthase, subunit b

Gene ontology:

Cell location: Cell membrane; Single-pass membrane protein [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the ATPase B chain family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002146
- InterPro:   IPR005864 [H]

Pfam domain/function: PF00430 ATP-synt_B [H]

EC number: 3.6.3.14

Molecular weight: Translated: 19634; Mature: 19634

Theoretical pI: Translated: 5.18; Mature: 5.18

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
4.0 %Met     (Translated Protein)
4.0 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
4.0 %Met     (Mature Protein)
4.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDTMMIAAGAGGEGLRILDMIFTIFTFLVLLALLKKFAWGPLLGMMRQREEYVANEIELA
CCCEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
EKSRKDAEHYVVEQRDALSAARTESKEMLDASRRQAEAEQARLVEQARLEAEQIKIEAEK
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
AIERERELAKQSLQTEVVTQALSAARHVLQSDLKGDEAKQRALVTDFLSKAKGAN
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCCC
>Mature Secondary Structure
MDTMMIAAGAGGEGLRILDMIFTIFTFLVLLALLKKFAWGPLLGMMRQREEYVANEIELA
CCCEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
EKSRKDAEHYVVEQRDALSAARTESKEMLDASRRQAEAEQARLVEQARLEAEQIKIEAEK
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
AIERERELAKQSLQTEVVTQALSAARHVLQSDLKGDEAKQRALVTDFLSKAKGAN
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: Borate; diphosphate; HCO3- [C]

Metal ions: Co2+; Fe2+; Mn2+; Zn2+ [C]

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: ATP; H2O; H+

Specific reaction: ATP + H2O + H+(in) = ADP + phosphate + H+(out)

General reaction: Phosphorous acid anhydride hydrolysis [C]

Inhibitor: Ca2+; CN-; Efrapeptin; Ethidiumbromide; Guanidines analogs; Oligomycin; Quercetin; Trialkyl tin derivatives; Venturicidin [C]

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: NA