| Definition | Exiguobacterium sp. AT1b, complete genome. |
|---|---|
| Accession | NC_012673 |
| Length | 2,999,895 |
Click here to switch to the map view.
The map label for this gene is mco [H]
Identifier: 229916989
GI number: 229916989
Start: 1237625
End: 1239172
Strand: Direct
Name: mco [H]
Synonym: EAT1b_1263
Alternate gene names: 229916989
Gene position: 1237625-1239172 (Clockwise)
Preceding gene: 229916986
Following gene: 229916990
Centisome position: 41.26
GC content: 49.81
Gene sequence:
>1548_bases ATGAAGGAGTGTTATAGCATGAAATCGAAAGGCATGTGGTTTCTGTTGACGGGGATTTTAATTGGGGGCATCTTCGTTTT ACTAGTCGTCCTCTTCAACGGAACATGGAACCATAACAACAATATGGACCAAAATCATATGATGGGACACGATTCGGCAA CGAGTCAGATGGATGATCACATGATGAGTGATAATGGAATGGATGACAATGACGGACCGATGGGACATGGAGCGATGCAA GAGCTCCAAGCATCGGATGAACCGACAAAGCCGCTTCCGATTCCGACTGCCTTACAGCCAGATCGTGTCACGGGAGACAC GGTCTACTATACGGTGGAAGCAACTAAAGGCACGTCACAATTTTTCAAAGACGGCAAGAAATCGGAAACGTTCGGCTATA ATGGAGACTTACTCGGACCAATGATCGAGTTACCGAAAGGAAAAACAGTCGTAATCGATACCATCAATCGATTGGATGAA CCGACAACGTTCCACTGGCACGGACTCGTCATCCCTGCCGACATGGACGGGGGACCTCATCAGACCGTCCCACCAGGTGA ACGGGCACAAGTTCGACTCGACATCGATCAAGAACCTAGTACACTGTGGTTTCACCCCCATCCGATGGGATCGACAGCCG AACAAGTTTATAAAGGACTCGCCGGTCTTCTTTATGTGACCGACGATGCACAGAACGGTCTCCCGAATGAATATGGAGTC GACGACATCCCACTCATCGTACAAGATCGACTCTTCACGCCTAACGGTGAGTTGGATTATGATGCCCATATGAACGTTGA TGGAACGACGGGGGATACCATTCTTGCGAATGGAGCCATCAACACGACGTTCGACGTTCAAACCGAGACGTTACGAGTGC GACTAGTCAACGGTTCGAATGCGCGTGATTTTGATTTTACGCTATCTAACGAGGCCGAGATGACGCAGATTGCGACAGAC GGAGGGCCGTTAGAACGCCCGATTCCCTTAGAGACCCTCACGTTGACACCAGGTGAACGGGCCGAGGTACTGATTGATTT TTCACAAGTTGAAGATGTCGCCGCCTTAAAAGCGGACGGGGTGACATTTACCACGTTTCGTATCGGTGAACTCGACAAGG CGTCCATTAAGATTCCGACGATTGAAACGGTGGAGCGCTCGACAGATGAGACAGCAGACCGTCGCCTCACCCTTTTTGGA ATGGGTAACATGGTGTCAATCAACGGAAAGACATATGACCCGGAGCGTATCGACATCGAAGCGAAACGCGGAGACACTGA GGTATGGGAAATTGAAAATAAGCCGGACATGATGGGTGGGATGACACATCCTTTCCACATCCACGGGGTCCAGTTCCGAG TCATCAGTCGAGACGGAAAACCACCATCCGATCAGGAGAAAGGGTGGAAAGATACGGTAGCCGTCGCTCCCGATGAACGG GTAAAAATCGAACTCACCTTCACCAAAACGGGAACGTTCATGTATCATTGCCACATCCTCGAGCATGAAGAAAATGGGAT GATGGGACAAGTAAACGTGACCGAATGA
Upstream 100 bases:
>100_bases TTACACAGATCACATACCCCTATATGGTATACAATAAAACGGATTTGGACTTTCATGTTTCTTTCACAATTAGGTGGTAC AACAAAGGGAGGACTGAACA
Downstream 100 bases:
>100_bases CCGACACCTCTCCGTTCCATCAGCGGAGAGGTGTTTTGTATCCGTCCCGATTTCGATACGTTTCTGCTAGGACTATTGCC TGTATAGGGATTCCTTCTCG
Product: multicopper oxidase type 3
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 515; Mature: 515
Protein sequence:
>515_residues MKECYSMKSKGMWFLLTGILIGGIFVLLVVLFNGTWNHNNNMDQNHMMGHDSATSQMDDHMMSDNGMDDNDGPMGHGAMQ ELQASDEPTKPLPIPTALQPDRVTGDTVYYTVEATKGTSQFFKDGKKSETFGYNGDLLGPMIELPKGKTVVIDTINRLDE PTTFHWHGLVIPADMDGGPHQTVPPGERAQVRLDIDQEPSTLWFHPHPMGSTAEQVYKGLAGLLYVTDDAQNGLPNEYGV DDIPLIVQDRLFTPNGELDYDAHMNVDGTTGDTILANGAINTTFDVQTETLRVRLVNGSNARDFDFTLSNEAEMTQIATD GGPLERPIPLETLTLTPGERAEVLIDFSQVEDVAALKADGVTFTTFRIGELDKASIKIPTIETVERSTDETADRRLTLFG MGNMVSINGKTYDPERIDIEAKRGDTEVWEIENKPDMMGGMTHPFHIHGVQFRVISRDGKPPSDQEKGWKDTVAVAPDER VKIELTFTKTGTFMYHCHILEHEENGMMGQVNVTE
Sequences:
>Translated_515_residues MKECYSMKSKGMWFLLTGILIGGIFVLLVVLFNGTWNHNNNMDQNHMMGHDSATSQMDDHMMSDNGMDDNDGPMGHGAMQ ELQASDEPTKPLPIPTALQPDRVTGDTVYYTVEATKGTSQFFKDGKKSETFGYNGDLLGPMIELPKGKTVVIDTINRLDE PTTFHWHGLVIPADMDGGPHQTVPPGERAQVRLDIDQEPSTLWFHPHPMGSTAEQVYKGLAGLLYVTDDAQNGLPNEYGV DDIPLIVQDRLFTPNGELDYDAHMNVDGTTGDTILANGAINTTFDVQTETLRVRLVNGSNARDFDFTLSNEAEMTQIATD GGPLERPIPLETLTLTPGERAEVLIDFSQVEDVAALKADGVTFTTFRIGELDKASIKIPTIETVERSTDETADRRLTLFG MGNMVSINGKTYDPERIDIEAKRGDTEVWEIENKPDMMGGMTHPFHIHGVQFRVISRDGKPPSDQEKGWKDTVAVAPDER VKIELTFTKTGTFMYHCHILEHEENGMMGQVNVTE >Mature_515_residues MKECYSMKSKGMWFLLTGILIGGIFVLLVVLFNGTWNHNNNMDQNHMMGHDSATSQMDDHMMSDNGMDDNDGPMGHGAMQ ELQASDEPTKPLPIPTALQPDRVTGDTVYYTVEATKGTSQFFKDGKKSETFGYNGDLLGPMIELPKGKTVVIDTINRLDE PTTFHWHGLVIPADMDGGPHQTVPPGERAQVRLDIDQEPSTLWFHPHPMGSTAEQVYKGLAGLLYVTDDAQNGLPNEYGV DDIPLIVQDRLFTPNGELDYDAHMNVDGTTGDTILANGAINTTFDVQTETLRVRLVNGSNARDFDFTLSNEAEMTQIATD GGPLERPIPLETLTLTPGERAEVLIDFSQVEDVAALKADGVTFTTFRIGELDKASIKIPTIETVERSTDETADRRLTLFG MGNMVSINGKTYDPERIDIEAKRGDTEVWEIENKPDMMGGMTHPFHIHGVQFRVISRDGKPPSDQEKGWKDTVAVAPDER VKIELTFTKTGTFMYHCHILEHEENGMMGQVNVTE
Specific function: May be involved in copper homeostasis and oxidative stress response [H]
COG id: COG2132
COG function: function code Q; Putative multicopper oxidases
Gene ontology:
Cell location: Cytoplasm (Potential) [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the multicopper oxidase family [H]
Homologues:
Organism=Escherichia coli, GI1786314, Length=495, Percent_Identity=36.5656565656566, Blast_Score=291, Evalue=6e-80, Organism=Escherichia coli, GI1789394, Length=450, Percent_Identity=31.5555555555556, Blast_Score=212, Evalue=6e-56, Organism=Drosophila melanogaster, GI24650186, Length=306, Percent_Identity=24.8366013071895, Blast_Score=78, Evalue=1e-14, Organism=Drosophila melanogaster, GI18859919, Length=268, Percent_Identity=28.3582089552239, Blast_Score=72, Evalue=1e-12,
Paralogues:
None
Copy number: 40 Molecules/Cell In: Stationary Phase, Rich Media (Based on E. coli). [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR011706 - InterPro: IPR011707 - InterPro: IPR002355 - InterPro: IPR008972 [H]
Pfam domain/function: PF07731 Cu-oxidase_2; PF07732 Cu-oxidase_3 [H]
EC number: NA
Molecular weight: Translated: 57095; Mature: 57095
Theoretical pI: Translated: 4.38; Mature: 4.38
Prosite motif: PS00079 MULTICOPPER_OXIDASE1 ; PS00080 MULTICOPPER_OXIDASE2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 4.9 %Met (Translated Protein) 5.2 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 4.9 %Met (Mature Protein) 5.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKECYSMKSKGMWFLLTGILIGGIFVLLVVLFNGTWNHNNNMDQNHMMGHDSATSQMDDH CCHHHHHCCCCEEEHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHCCCCCCHHHHHHHH MMSDNGMDDNDGPMGHGAMQELQASDEPTKPLPIPTALQPDRVTGDTVYYTVEATKGTSQ HHCCCCCCCCCCCCCCHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCEEEEEEEECCCCHH FFKDGKKSETFGYNGDLLGPMIELPKGKTVVIDTINRLDEPTTFHWHGLVIPADMDGGPH HHHCCCCCCCCCCCCCCCCHHEECCCCCEEEEEEHHHCCCCCEEEEEEEEEEECCCCCCC QTVPPGERAQVRLDIDQEPSTLWFHPHPMGSTAEQVYKGLAGLLYVTDDAQNGLPNEYGV CCCCCCCCEEEEEEECCCCCEEEECCCCCCCHHHHHHHCCCEEEEEECCCCCCCCCCCCC DDIPLIVQDRLFTPNGELDYDAHMNVDGTTGDTILANGAINTTFDVQTETLRVRLVNGSN CCCCEEEECEEECCCCCCCCCEEECCCCCCCCEEEECCCCCCEEEEEEEEEEEEEEECCC ARDFDFTLSNEAEMTQIATDGGPLERPIPLETLTLTPGERAEVLIDFSQVEDVAALKADG CCEEEEEECCCCCEEEEECCCCCCCCCCCCEEEEECCCCCEEEEEEHHHHHHHHHEECCC VTFTTFRIGELDKASIKIPTIETVERSTDETADRRLTLFGMGNMVSINGKTYDPERIDIE EEEEEEEECCCCCCEEECCCHHHHHCCCCCHHHCEEEEEECCCEEEECCCCCCCCEEEEE AKRGDTEVWEIENKPDMMGGMTHPFHIHGVQFRVISRDGKPPSDQEKGWKDTVAVAPDER ECCCCCEEEEECCCCCHHCCCCCCEEEEEEEEEEEECCCCCCCCHHCCCCCEEEECCCCE VKIELTFTKTGTFMYHCHILEHEENGMMGQVNVTE EEEEEEEEECCEEEEEEEEEEECCCCCEEEEEECC >Mature Secondary Structure MKECYSMKSKGMWFLLTGILIGGIFVLLVVLFNGTWNHNNNMDQNHMMGHDSATSQMDDH CCHHHHHCCCCEEEHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHCCCCCCHHHHHHHH MMSDNGMDDNDGPMGHGAMQELQASDEPTKPLPIPTALQPDRVTGDTVYYTVEATKGTSQ HHCCCCCCCCCCCCCCHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCEEEEEEEECCCCHH FFKDGKKSETFGYNGDLLGPMIELPKGKTVVIDTINRLDEPTTFHWHGLVIPADMDGGPH HHHCCCCCCCCCCCCCCCCHHEECCCCCEEEEEEHHHCCCCCEEEEEEEEEEECCCCCCC QTVPPGERAQVRLDIDQEPSTLWFHPHPMGSTAEQVYKGLAGLLYVTDDAQNGLPNEYGV CCCCCCCCEEEEEEECCCCCEEEECCCCCCCHHHHHHHCCCEEEEEECCCCCCCCCCCCC DDIPLIVQDRLFTPNGELDYDAHMNVDGTTGDTILANGAINTTFDVQTETLRVRLVNGSN CCCCEEEECEEECCCCCCCCCEEECCCCCCCCEEEECCCCCCEEEEEEEEEEEEEEECCC ARDFDFTLSNEAEMTQIATDGGPLERPIPLETLTLTPGERAEVLIDFSQVEDVAALKADG CCEEEEEECCCCCEEEEECCCCCCCCCCCCEEEEECCCCCEEEEEEHHHHHHHHHEECCC VTFTTFRIGELDKASIKIPTIETVERSTDETADRRLTLFGMGNMVSINGKTYDPERIDIE EEEEEEEECCCCCCEEECCCHHHHHCCCCCHHHCEEEEEECCCEEEECCCCCCCCEEEEE AKRGDTEVWEIENKPDMMGGMTHPFHIHGVQFRVISRDGKPPSDQEKGWKDTVAVAPDER ECCCCCEEEEECCCCCHHCCCCCCEEEEEEEEEEEECCCCCCCCHHCCCCCEEEECCCCE VKIELTFTKTGTFMYHCHILEHEENGMMGQVNVTE EEEEEEEEECCEEEEEEEEEEECCCCCEEEEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA