| Definition | Exiguobacterium sp. AT1b, complete genome. |
|---|---|
| Accession | NC_012673 |
| Length | 2,999,895 |
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The map label for this gene is 229916966
Identifier: 229916966
GI number: 229916966
Start: 1215593
End: 1215949
Strand: Direct
Name: 229916966
Synonym: EAT1b_1240
Alternate gene names: NA
Gene position: 1215593-1215949 (Clockwise)
Preceding gene: 229916963
Following gene: 229916967
Centisome position: 40.52
GC content: 48.74
Gene sequence:
>357_bases ATGGGTCACCGAATCTATACGACGAGTTTCGCGAGCGTTTATCCACTCTACGTCGCCAAAGCCGAACGCAAAGGACGGAC GAAGGAAGAAGTCGACACCATCATCGAATGGTTGACCGGTTACGATGAGACCGGACTCGAACGTCAGATAGCCAATCAAG TCGATTTTGATACGTTTTTCGCTTCAGCACCTCGTCTGAATGAAGACCGCGCCCTCATCAAAGGTGTCGTCTGTGGGGTC CGTGTCGAGAACGTTGAAGAACCACTCATGCGTGAGATCCGTTATTTGGACAAACTCATCGATGAGTTGGCAAAAGGAAA GAAAATGGAGAAGATTTTACGAGGAGGTGAATCATGA
Upstream 100 bases:
>100_bases TCCCTTTGTTGCAAATGCAACAAAATACTTTATATAAGCGTATCGTAATTTGTGAGAGAATGGAAGTAAGAATTTTCGCT AAGAAGGAGATGAATGAGAG
Downstream 100 bases:
>100_bases TGGATGTGACAGCACTCGTCGACGAGGCACGGCTCGATTCATTTATTCATCTGCTCGAGGTCATCGATGATCATTTACCT GGCGGATTTGAAAAAACGAC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 118; Mature: 117
Protein sequence:
>118_residues MGHRIYTTSFASVYPLYVAKAERKGRTKEEVDTIIEWLTGYDETGLERQIANQVDFDTFFASAPRLNEDRALIKGVVCGV RVENVEEPLMREIRYLDKLIDELAKGKKMEKILRGGES
Sequences:
>Translated_118_residues MGHRIYTTSFASVYPLYVAKAERKGRTKEEVDTIIEWLTGYDETGLERQIANQVDFDTFFASAPRLNEDRALIKGVVCGV RVENVEEPLMREIRYLDKLIDELAKGKKMEKILRGGES >Mature_117_residues GHRIYTTSFASVYPLYVAKAERKGRTKEEVDTIIEWLTGYDETGLERQIANQVDFDTFFASAPRLNEDRALIKGVVCGVR VENVEEPLMREIRYLDKLIDELAKGKKMEKILRGGES
Specific function: Unknown
COG id: COG4898
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 13529; Mature: 13397
Theoretical pI: Translated: 5.32; Mature: 5.32
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 2.5 %Met (Translated Protein) 3.4 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 1.7 %Met (Mature Protein) 2.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGHRIYTTSFASVYPLYVAKAERKGRTKEEVDTIIEWLTGYDETGLERQIANQVDFDTFF CCCEEEECHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCCCCHHHHHHHHCCHHHHH ASAPRLNEDRALIKGVVCGVRVENVEEPLMREIRYLDKLIDELAKGKKMEKILRGGES HCCCCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHCCCCC >Mature Secondary Structure GHRIYTTSFASVYPLYVAKAERKGRTKEEVDTIIEWLTGYDETGLERQIANQVDFDTFF CCEEEECHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCCCCHHHHHHHHCCHHHHH ASAPRLNEDRALIKGVVCGVRVENVEEPLMREIRYLDKLIDELAKGKKMEKILRGGES HCCCCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA