Definition Exiguobacterium sp. AT1b, complete genome.
Accession NC_012673
Length 2,999,895

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The map label for this gene is 229916921

Identifier: 229916921

GI number: 229916921

Start: 1165277

End: 1166839

Strand: Reverse

Name: 229916921

Synonym: EAT1b_1194

Alternate gene names: NA

Gene position: 1166839-1165277 (Counterclockwise)

Preceding gene: 229916922

Following gene: 229916920

Centisome position: 38.9

GC content: 52.85

Gene sequence:

>1563_bases
ATGTCGACACGCATGACGCTAGACGAGGCAGCCAGTAACCGTAAAATCAAGATCGGGGCGGTCATGTCCTACACGCAGAT
CTTTTTCGGCATCTTATCCGGTCTCATCTATACGCCGTGGATGATTCATGAGATCGGGCAGGCGAGTTACGGGTTGTATA
TGCTGACCATCTCGCTCATCAGTATGTTCGCGATGGACTTCGGGCTCGATGCGGCCGTCTCACGATTCATGAGCAAGTAT
ATGGCGGAGGGGGACCACGAGCGGGCAGGACGATTTTTAGGCATCGCCTATAAACTGTTCATCGCCATCTCACTCGTCCT
CTTCCTCATCCTCACCGTCGTCTACTTCTTCTTGGACTCGATTTACTCGAGTTTGACGGCGACCGAGCTCGAACAGTTGA
AAGTCCTCTATGTGATTGCGGGACTGTTCATCGTCGTCTCGTTCCCGACGAAGCCATTCTCTGGCATTCTCGTATCCCAT
GAACAATTCCTCTTCTCGAGTGCCCTGCATCTCGCTGAGAAGGTCGGGACGGTCGCCTTGATGGTCACTGCGCTTCTTCT
CGGCTATGGGTTGTATGCCCTCGTCATCGTCAATGCGCTAGTCGGCACGATTGTCTTACTCATCGAGTACGTCTTCATTC
GGCGTAAGACTCTCGTTCGTGCCAATTTTCAGAATCGAGAGAAGGGGATTTATCGGGACATCTTTAGCTTCACGTCCTGG
AGCACGATTACGCTCGTCGCCCAACGCTTCGTGTTGAACATTACCCCGAGTCTACTGGGGATTCTAGCGGGCAGTGCCTC
GATTGCCCTCTTTTCCGTCGGGATGGTCATCGAAGGGTATGTCTGGACCATCGCGGCCTCGCTCGGTTACTTATTCCTTC
CGAAAGTCAGTCGGATGTTGTCCCGAAACGATCGCGAGGCCATCGGGTACCTCTTCGTCCGCATCGGTCGGATTCAACTG
TATATCGTCGGACTCATCCTCGCCTCGTTCTTCATCCTCGGTCGCGAGTTCATGCACCTATGGGTCGGACCAGACTTCAC
CGACTCCTACGTCATCGCCCTTCTCTTGATTGCACCGAGTGTGATCACATTGACGCAAGACATCGGCAATACGACACTCA
TTGCCGAGAACAAAGTGAAGTATCGGGCGTTCGCTGCCCTCATCGTGGCCGCCATCAGTATGACGCTCTCACCACTGTTG
ATTCCACACTTTGGTCCGATTGGTGCGGCCATCGCCATTTGTATCGGCAACATCGTCGGACTCGTCTTCTATATGAACGT
GATTTACCATCGGGTCCTCGGTCTCGACATCCTCGACTTTTTCCGCAAGTGCCATCTGAAGCTCTTGCCTGGTATTCTCC
TGTACACGCTCATCGGCTGGGGAATCCAGTTCTTCTTCCCGTCCTCGAATTGGTTCGGCTTCGGGGTGAAGGGAATCGTG
CTCATCAGTATTTACGCAATAATCATGTGGGGACTCGCATTTGATGAGACGGAGAAAGCCATGTTCCGCCAAGTGTTCGC
TCAATTGAAACTACGCATCCTATCCATTCACCACACATCCTAG

Upstream 100 bases:

>100_bases
ACTCGTCGTCTATTACTCGGCGGTCATGTTGCTCGGTCTCTTGTTCATTCGCGAAGCGCCGGTTTATTCGTTCTTTTGGT
AACACGAGGAGGTGAAGCAT

Downstream 100 bases:

>100_bases
GAGGGAACAAGATGAAACGACTCAAGGTCATGACGATTGTTGGTACCAGACCCGAAATCATTCGATTGTCCGCCGTGATG
GCACGTCTCGAAGCCTCCGA

Product: polysaccharide biosynthesis protein

Products: NA

Alternate protein names: Polysaccharide Biosynthesis Family Protein; Virulence Factor MviN Family Protein

Number of amino acids: Translated: 520; Mature: 519

Protein sequence:

>520_residues
MSTRMTLDEAASNRKIKIGAVMSYTQIFFGILSGLIYTPWMIHEIGQASYGLYMLTISLISMFAMDFGLDAAVSRFMSKY
MAEGDHERAGRFLGIAYKLFIAISLVLFLILTVVYFFLDSIYSSLTATELEQLKVLYVIAGLFIVVSFPTKPFSGILVSH
EQFLFSSALHLAEKVGTVALMVTALLLGYGLYALVIVNALVGTIVLLIEYVFIRRKTLVRANFQNREKGIYRDIFSFTSW
STITLVAQRFVLNITPSLLGILAGSASIALFSVGMVIEGYVWTIAASLGYLFLPKVSRMLSRNDREAIGYLFVRIGRIQL
YIVGLILASFFILGREFMHLWVGPDFTDSYVIALLLIAPSVITLTQDIGNTTLIAENKVKYRAFAALIVAAISMTLSPLL
IPHFGPIGAAIAICIGNIVGLVFYMNVIYHRVLGLDILDFFRKCHLKLLPGILLYTLIGWGIQFFFPSSNWFGFGVKGIV
LISIYAIIMWGLAFDETEKAMFRQVFAQLKLRILSIHHTS

Sequences:

>Translated_520_residues
MSTRMTLDEAASNRKIKIGAVMSYTQIFFGILSGLIYTPWMIHEIGQASYGLYMLTISLISMFAMDFGLDAAVSRFMSKY
MAEGDHERAGRFLGIAYKLFIAISLVLFLILTVVYFFLDSIYSSLTATELEQLKVLYVIAGLFIVVSFPTKPFSGILVSH
EQFLFSSALHLAEKVGTVALMVTALLLGYGLYALVIVNALVGTIVLLIEYVFIRRKTLVRANFQNREKGIYRDIFSFTSW
STITLVAQRFVLNITPSLLGILAGSASIALFSVGMVIEGYVWTIAASLGYLFLPKVSRMLSRNDREAIGYLFVRIGRIQL
YIVGLILASFFILGREFMHLWVGPDFTDSYVIALLLIAPSVITLTQDIGNTTLIAENKVKYRAFAALIVAAISMTLSPLL
IPHFGPIGAAIAICIGNIVGLVFYMNVIYHRVLGLDILDFFRKCHLKLLPGILLYTLIGWGIQFFFPSSNWFGFGVKGIV
LISIYAIIMWGLAFDETEKAMFRQVFAQLKLRILSIHHTS
>Mature_519_residues
STRMTLDEAASNRKIKIGAVMSYTQIFFGILSGLIYTPWMIHEIGQASYGLYMLTISLISMFAMDFGLDAAVSRFMSKYM
AEGDHERAGRFLGIAYKLFIAISLVLFLILTVVYFFLDSIYSSLTATELEQLKVLYVIAGLFIVVSFPTKPFSGILVSHE
QFLFSSALHLAEKVGTVALMVTALLLGYGLYALVIVNALVGTIVLLIEYVFIRRKTLVRANFQNREKGIYRDIFSFTSWS
TITLVAQRFVLNITPSLLGILAGSASIALFSVGMVIEGYVWTIAASLGYLFLPKVSRMLSRNDREAIGYLFVRIGRIQLY
IVGLILASFFILGREFMHLWVGPDFTDSYVIALLLIAPSVITLTQDIGNTTLIAENKVKYRAFAALIVAAISMTLSPLLI
PHFGPIGAAIAICIGNIVGLVFYMNVIYHRVLGLDILDFFRKCHLKLLPGILLYTLIGWGIQFFFPSSNWFGFGVKGIVL
ISIYAIIMWGLAFDETEKAMFRQVFAQLKLRILSIHHTS

Specific function: Unknown

COG id: COG2244

COG function: function code R; Membrane protein involved in the export of O-antigen and teichoic acid

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 58014; Mature: 57883

Theoretical pI: Translated: 9.65; Mature: 9.65

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
3.3 %Met     (Translated Protein)
3.7 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
3.1 %Met     (Mature Protein)
3.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure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HHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHEECCC
>Mature Secondary Structure 
STRMTLDEAASNRKIKIGAVMSYTQIFFGILSGLIYTPWMIHEIGQASYGLYMLTISLI
CCCCCHHHHCCCCEEEEHHHHHHHHHHHHHHHHHHHCCHHHHHHCCCHHHHHHHHHHHH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HHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHEECCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA